RNA–Protein interactions for RNA: ENST00000487938.5

VIM-206, Transcript of vimentin, humanhuman

TSL 5

Gene VIM, Length 2,272 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-206ENST00000487938 ACO1P21399 889 aaKnown RBP19.1■□□□□ 0.65
VIM-206ENST00000487938 PDE4CQ08493 712 aa19.1■□□□□ 0.65
VIM-206ENST00000487938 XRRA1Q6P2D8 792 aa19.1■□□□□ 0.65
VIM-206ENST00000487938 CRELD2Q6UXH1 353 aaPredicted RBP19.1■□□□□ 0.65
VIM-206ENST00000487938 SAMD7Q7Z3H4 446 aa19.1■□□□□ 0.65
VIM-206ENST00000487938 SAMD15Q9P1V8 674 aa19.1■□□□□ 0.65
VIM-206ENST00000487938 UMODL1Q5DID0 1318 aa19.1■□□□□ 0.65
VIM-206ENST00000487938 TMEM120BA0PK00 339 aa19.09■□□□□ 0.65
VIM-206ENST00000487938 THAP12O43422 761 aa19.09■□□□□ 0.65
VIM-206ENST00000487938 DKC1O60832 514 aaKnown RBP eCLIP19.09■□□□□ 0.65
VIM-206ENST00000487938 POLGP54098 1239 aaPredicted RBP19.09■□□□□ 0.65
VIM-206ENST00000487938 BACE1P56817 501 aa19.09■□□□□ 0.65
VIM-206ENST00000487938 BPIFB4P59827 614 aa19.09■□□□□ 0.65
VIM-206ENST00000487938 SP2Q02086 613 aa19.09■□□□□ 0.65
VIM-206ENST00000487938 STRN3Q13033 797 aa19.09■□□□□ 0.65
VIM-206ENST00000487938 PRAMEF18Q5VWM3 479 aa19.09■□□□□ 0.65
VIM-206ENST00000487938 DEFB132Q7Z7B7 95 aa19.09■□□□□ 0.65
VIM-206ENST00000487938 FUKQ8N0W3 1084 aa19.09■□□□□ 0.65
VIM-206ENST00000487938 ANKRD42Q8N9B4 389 aa19.09■□□□□ 0.65
VIM-206ENST00000487938 SLC16A10Q8TF71 515 aa19.09■□□□□ 0.65
VIM-206ENST00000487938 GRK7Q8WTQ7 553 aa19.09■□□□□ 0.65
VIM-206ENST00000487938 TRIM11Q96F44 468 aa19.09■□□□□ 0.65
VIM-206ENST00000487938 SERPINB12Q96P63 405 aa19.09■□□□□ 0.65
VIM-206ENST00000487938 KLHL11Q9NVR0 708 aa19.09■□□□□ 0.65
VIM-206ENST00000487938 TBK1Q9UHD2 729 aa19.09■□□□□ 0.65
VIM-206ENST00000487938 GNA15P30679 374 aa19.09■□□□□ 0.65
VIM-206ENST00000487938 BAG6P46379 1132 aa19.09■□□□□ 0.65
VIM-206ENST00000487938 RTP1P59025 263 aa19.09■□□□□ 0.65
VIM-206ENST00000487938 CLDN10P78369 228 aa19.09■□□□□ 0.65
VIM-206ENST00000487938 MAMLD1Q13495 774 aa19.09■□□□□ 0.65
VIM-206ENST00000487938 CUL2Q13617 745 aa19.09■□□□□ 0.65
VIM-206ENST00000487938 TNFAIP1Q13829 316 aa19.09■□□□□ 0.65
VIM-206ENST00000487938 EMC2Q15006 297 aa19.09■□□□□ 0.65
VIM-206ENST00000487938 ATP13A4Q4VNC1 1196 aa19.09■□□□□ 0.65
VIM-206ENST00000487938 LIN9Q5TKA1 542 aa19.09■□□□□ 0.65
VIM-206ENST00000487938 CYP4X1Q8N118 509 aa19.09■□□□□ 0.65
VIM-206ENST00000487938 TRAIPQ9BWF2 469 aa19.09■□□□□ 0.65
VIM-206ENST00000487938 CCDC134Q9H6E4 229 aa19.09■□□□□ 0.65
VIM-206ENST00000487938 HOMER3Q9NSC5 361 aa19.09■□□□□ 0.65
VIM-206ENST00000487938 NINJ2Q9NZG7 142 aa19.09■□□□□ 0.65
VIM-206ENST00000487938 ANKFY1Q9P2R3 1169 aa19.09■□□□□ 0.65
VIM-206ENST00000487938 GGT7Q9UJ14 662 aa19.09■□□□□ 0.65
VIM-206ENST00000487938 CD2APQ9Y5K6 639 aa19.09■□□□□ 0.65
VIM-206ENST00000487938 LRRIQ4A6NIV6 560 aa19.08■□□□□ 0.65
VIM-206ENST00000487938 ATP4AP20648 1035 aa19.08■□□□□ 0.65
VIM-206ENST00000487938 NF2P35240 595 aa19.08■□□□□ 0.65
VIM-206ENST00000487938 HMGCS2P54868 508 aa19.08■□□□□ 0.65
VIM-206ENST00000487938 ADCY1Q08828 1119 aa19.08■□□□□ 0.65
VIM-206ENST00000487938 KLF1Q13351 362 aaPredicted RBP19.08■□□□□ 0.65
VIM-206ENST00000487938 VSTM1Q6UX27 236 aa19.08■□□□□ 0.65
VIM-206ENST00000487938 SYDE1Q6ZW31 735 aaPredicted RBP19.08■□□□□ 0.65
VIM-206ENST00000487938 RHOT1Q8IXI2 618 aa19.08■□□□□ 0.65
VIM-206ENST00000487938 REPS2Q8NFH8 660 aa19.08■□□□□ 0.65
VIM-206ENST00000487938 ASAP3Q8TDY4 903 aa19.08■□□□□ 0.65
VIM-206ENST00000487938 KIAA1586Q9HCI6 787 aa19.08■□□□□ 0.65
VIM-206ENST00000487938 RBAKQ9NYW8 714 aaPredicted RBP19.08■□□□□ 0.65
VIM-206ENST00000487938 PIM2Q9P1W9 311 aa19.08■□□□□ 0.65
VIM-206ENST00000487938 TCP11X1B4DZS4 312 aa19.08■□□□□ 0.64
VIM-206ENST00000487938 TLR3O15455 904 aaKnown RBP19.08■□□□□ 0.64
VIM-206ENST00000487938 MAN1A1P33908 653 aa19.08■□□□□ 0.64
VIM-206ENST00000487938 NOMO3P69849 1222 aa19.08■□□□□ 0.64
VIM-206ENST00000487938 TMEM132BQ14DG7 1078 aa19.08■□□□□ 0.64
VIM-206ENST00000487938 CYB5D1Q6P9G0 228 aa19.08■□□□□ 0.64
VIM-206ENST00000487938 ABRAQ8N0Z2 381 aa19.08■□□□□ 0.64
VIM-206ENST00000487938 ZNF526Q8TF50 670 aaPredicted RBP19.08■□□□□ 0.64
VIM-206ENST00000487938 TARS2Q9BW92 718 aaKnown RBP19.08■□□□□ 0.64
VIM-206ENST00000487938 OSBPL8Q9BZF1 889 aa19.08■□□□□ 0.64
VIM-206ENST00000487938 PI4K2BG5E9Z4 385 aa19.07■□□□□ 0.64
VIM-206ENST00000487938 K7ERI5 159 aa19.07■□□□□ 0.64
VIM-206ENST00000487938 GHRP10912 638 aa19.07■□□□□ 0.64
VIM-206ENST00000487938 CETPP11597 493 aa19.07■□□□□ 0.64
VIM-206ENST00000487938 HARSP12081 509 aaKnown RBP19.07■□□□□ 0.64
VIM-206ENST00000487938 ITIH4Q14624 930 aa19.07■□□□□ 0.64
VIM-206ENST00000487938 XKR3Q5GH77 459 aa19.07■□□□□ 0.64
VIM-206ENST00000487938 KAZNQ674X7 775 aa19.07■□□□□ 0.64
VIM-206ENST00000487938 MIS18BP1Q6P0N0 1132 aa19.07■□□□□ 0.64
VIM-206ENST00000487938 SEPT14Q6ZU15 432 aa19.07■□□□□ 0.64
VIM-206ENST00000487938 ZNF365Q70YC5 407 aa19.07■□□□□ 0.64
VIM-206ENST00000487938 OR5B17Q8NGF7 314 aa19.07■□□□□ 0.64
VIM-206ENST00000487938 GDAP1Q8TB36 358 aa19.07■□□□□ 0.64
VIM-206ENST00000487938 C9orf72Q96LT7 481 aa19.07■□□□□ 0.64
VIM-206ENST00000487938 HACL1Q9UJ83 578 aa19.07■□□□□ 0.64
VIM-206ENST00000487938 ZNF214Q9UL59 606 aaPredicted RBP19.07■□□□□ 0.64
VIM-206ENST00000487938 NEU2Q9Y3R4 380 aa19.07■□□□□ 0.64
VIM-206ENST00000487938 NUB1Q9Y5A7 615 aa19.07■□□□□ 0.64
VIM-206ENST00000487938 UTRNP46939 3433 aa19.07■□□□□ 0.64
VIM-206ENST00000487938 FDX1P10109 184 aa19.07■□□□□ 0.64
VIM-206ENST00000487938 TCF4P15884 667 aa19.07■□□□□ 0.64
VIM-206ENST00000487938 GLRA2P23416 452 aa19.07■□□□□ 0.64
VIM-206ENST00000487938 MPP2Q14168 576 aa19.07■□□□□ 0.64
VIM-206ENST00000487938 CCNG2Q16589 344 aa19.07■□□□□ 0.64
VIM-206ENST00000487938 FAM133BQ5BKY9 247 aaKnown RBP19.07■□□□□ 0.64
VIM-206ENST00000487938 ZFYVE27Q5T4F4 411 aa19.07■□□□□ 0.64
VIM-206ENST00000487938 SWT1Q5T5J6 900 aaKnown RBP19.07■□□□□ 0.64
VIM-206ENST00000487938 GSTA5Q7RTV2 222 aa19.07■□□□□ 0.64
VIM-206ENST00000487938 RBBP8NLQ8NC74 664 aaPredicted RBP19.07■□□□□ 0.64
VIM-206ENST00000487938 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.07■□□□□ 0.64
VIM-206ENST00000487938 JDP2Q8WYK2 163 aa19.07■□□□□ 0.64
VIM-206ENST00000487938 P3H4Q92791 437 aa19.07■□□□□ 0.64
VIM-206ENST00000487938 MSTO1Q9BUK6 570 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms