RNA–Protein interactions for RNA: ENST00000487453.1

PRDM2-208, Transcript of PR/SET domain 2, humanhuman

TSL 3

Gene PRDM2, Length 646 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-208ENST00000487453 TRAPPC11Q7Z392 1133 aa13.77□□□□□ -0.21
PRDM2-208ENST00000487453 FRMD5Q7Z6J6 570 aa13.77□□□□□ -0.21
PRDM2-208ENST00000487453 ENOX1Q8TC92 643 aaKnown RBP13.77□□□□□ -0.21
PRDM2-208ENST00000487453 POF1BQ8WVV4 589 aa13.77□□□□□ -0.21
PRDM2-208ENST00000487453 ZNF560Q96MR9 790 aa13.77□□□□□ -0.21
PRDM2-208ENST00000487453 THAP9Q9H5L6 903 aa13.77□□□□□ -0.21
PRDM2-208ENST00000487453 PUF60Q9UHX1 559 aaKnown RBP13.77□□□□□ -0.21
PRDM2-208ENST00000487453 AGAP1Q9UPQ3 857 aa13.77□□□□□ -0.21
PRDM2-208ENST00000487453 CHD9Q3L8U1 2897 aa13.77□□□□□ -0.21
PRDM2-208ENST00000487453 ATG2AQ2TAZ0 1938 aa13.76□□□□□ -0.21
PRDM2-208ENST00000487453 TSC2P49815 1807 aa13.76□□□□□ -0.21
PRDM2-208ENST00000487453 I3L4J1 428 aa13.76□□□□□ -0.21
PRDM2-208ENST00000487453 MTIF2P46199 727 aaKnown RBP13.76□□□□□ -0.21
PRDM2-208ENST00000487453 BRCC3P46736 316 aa13.76□□□□□ -0.21
PRDM2-208ENST00000487453 GCLMP48507 274 aa13.76□□□□□ -0.21
PRDM2-208ENST00000487453 TAF6P49848 677 aa13.76□□□□□ -0.21
PRDM2-208ENST00000487453 ZNF165P49910 485 aa13.76□□□□□ -0.21
PRDM2-208ENST00000487453 MXI1P50539 228 aa13.76□□□□□ -0.21
PRDM2-208ENST00000487453 CLDN10P78369 228 aa13.76□□□□□ -0.21
PRDM2-208ENST00000487453 UBE3AQ05086 875 aa13.76□□□□□ -0.21
PRDM2-208ENST00000487453 ENPEPQ07075 957 aa13.76□□□□□ -0.21
PRDM2-208ENST00000487453 TRPC3Q13507 836 aa13.76□□□□□ -0.21
PRDM2-208ENST00000487453 SV2CQ496J9 727 aa13.76□□□□□ -0.21
PRDM2-208ENST00000487453 TDRD10Q5VZ19 366 aaKnown RBP13.76□□□□□ -0.21
PRDM2-208ENST00000487453 GPR153Q6NV75 609 aa13.76□□□□□ -0.21
PRDM2-208ENST00000487453 DEFB123Q8N688 67 aa13.76□□□□□ -0.21
PRDM2-208ENST00000487453 ZNF516Q92618 1163 aa13.76□□□□□ -0.21
PRDM2-208ENST00000487453 BORCS6Q96GS4 357 aa13.76□□□□□ -0.21
PRDM2-208ENST00000487453 ENTPD7Q9NQZ7 604 aa13.76□□□□□ -0.21
PRDM2-208ENST00000487453 TLR9Q9NR96 1032 aa13.76□□□□□ -0.21
PRDM2-208ENST00000487453 SAMSN1Q9NSI8 373 aaKnown RBP13.76□□□□□ -0.21
PRDM2-208ENST00000487453 TRIOBPQ9H2D6 2365 aa13.76□□□□□ -0.21
PRDM2-208ENST00000487453 ANO9A1A5B4 782 aa13.75□□□□□ -0.21
PRDM2-208ENST00000487453 IKBKBO14920 756 aa13.75□□□□□ -0.21
PRDM2-208ENST00000487453 TRAPPC3O43617 180 aa13.75□□□□□ -0.21
PRDM2-208ENST00000487453 URODP06132 367 aa13.75□□□□□ -0.21
PRDM2-208ENST00000487453 IGFBP6P24592 240 aaPredicted RBP13.75□□□□□ -0.21
PRDM2-208ENST00000487453 DNAJB1P25685 340 aa13.75□□□□□ -0.21
PRDM2-208ENST00000487453 PNPLA4P41247 253 aa13.75□□□□□ -0.21
PRDM2-208ENST00000487453 MARSP56192 900 aaKnown RBP13.75□□□□□ -0.21
PRDM2-208ENST00000487453 RBP5P82980 135 aa13.75□□□□□ -0.21
PRDM2-208ENST00000487453 PPP3CAQ08209 521 aa13.75□□□□□ -0.21
PRDM2-208ENST00000487453 ELAVL2Q12926 359 aaKnown RBP13.75□□□□□ -0.21
PRDM2-208ENST00000487453 PTPROQ16827 1216 aa13.75□□□□□ -0.21
PRDM2-208ENST00000487453 C1orf220Q5T0J3 134 aa13.75□□□□□ -0.21
PRDM2-208ENST00000487453 FAM171A1Q5VUB5 890 aa13.75□□□□□ -0.21
PRDM2-208ENST00000487453 KIAA1841Q6NSI8 718 aa13.75□□□□□ -0.21
PRDM2-208ENST00000487453 DSTYKQ6XUX3 929 aa13.75□□□□□ -0.21
PRDM2-208ENST00000487453 TMC7Q7Z402 723 aa13.75□□□□□ -0.21
PRDM2-208ENST00000487453 DDX53Q86TM3 631 aaKnown RBP13.75□□□□□ -0.21
PRDM2-208ENST00000487453 CEP57Q86XR8 500 aa13.75□□□□□ -0.21
PRDM2-208ENST00000487453 TRIM59Q8IWR1 403 aa13.75□□□□□ -0.21
PRDM2-208ENST00000487453 VPS52Q8N1B4 723 aa13.75□□□□□ -0.21
PRDM2-208ENST00000487453 LRRC52Q8N7C0 313 aa13.75□□□□□ -0.21
PRDM2-208ENST00000487453 SPPL3Q8TCT6 385 aa13.75□□□□□ -0.21
PRDM2-208ENST00000487453 MICAL1Q8TDZ2 1067 aa13.75□□□□□ -0.21
PRDM2-208ENST00000487453 SLC35C1Q96A29 364 aa13.75□□□□□ -0.21
PRDM2-208ENST00000487453 B3GALT6Q96L58 329 aa13.75□□□□□ -0.21
PRDM2-208ENST00000487453 GAS2L1Q99501 681 aaPredicted RBP13.75□□□□□ -0.21
PRDM2-208ENST00000487453 TCF25Q9BQ70 676 aa13.75□□□□□ -0.21
PRDM2-208ENST00000487453 BPIFA3Q9BQP9 254 aa13.75□□□□□ -0.21
PRDM2-208ENST00000487453 HERC2P3Q9BVR0 1158 aa13.75□□□□□ -0.21
PRDM2-208ENST00000487453 VN1R3Q9BXE9 311 aa13.75□□□□□ -0.21
PRDM2-208ENST00000487453 GPR62Q9BZJ7 368 aa13.75□□□□□ -0.21
PRDM2-208ENST00000487453 TMEM8AQ9HCN3 771 aa13.75□□□□□ -0.21
PRDM2-208ENST00000487453 STK39Q9UEW8 545 aa13.75□□□□□ -0.21
PRDM2-208ENST00000487453 SIX4Q9UIU6 781 aa13.75□□□□□ -0.21
PRDM2-208ENST00000487453 LZTS1Q9Y250 596 aa13.75□□□□□ -0.21
PRDM2-208ENST00000487453 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.75□□□□□ -0.21
PRDM2-208ENST00000487453 BECN2A8MW95 431 aa13.74□□□□□ -0.21
PRDM2-208ENST00000487453 KCNJ18B7U540 433 aa13.74□□□□□ -0.21
PRDM2-208ENST00000487453 PIRO00625 290 aa13.74□□□□□ -0.21
PRDM2-208ENST00000487453 C2CD2LO14523 706 aa13.74□□□□□ -0.21
PRDM2-208ENST00000487453 C4BPAP04003 597 aaKnown RBP13.74□□□□□ -0.21
PRDM2-208ENST00000487453 SOD2P04179 222 aa13.74□□□□□ -0.21
PRDM2-208ENST00000487453 IGFBP4P22692 258 aa13.74□□□□□ -0.21
PRDM2-208ENST00000487453 GLUD2P49448 558 aa13.74□□□□□ -0.21
PRDM2-208ENST00000487453 MYL7Q01449 175 aa13.74□□□□□ -0.21
PRDM2-208ENST00000487453 MYO1EQ12965 1108 aa13.74□□□□□ -0.21
PRDM2-208ENST00000487453 NCOA4Q13772 614 aa13.74□□□□□ -0.21
PRDM2-208ENST00000487453 KCNJ12Q14500 433 aa13.74□□□□□ -0.21
PRDM2-208ENST00000487453 ZACNQ401N2 412 aa13.74□□□□□ -0.21
PRDM2-208ENST00000487453 PLPP4Q5VZY2 271 aa13.74□□□□□ -0.21
PRDM2-208ENST00000487453 KRT39Q6A163 491 aa13.74□□□□□ -0.21
PRDM2-208ENST00000487453 SCARA3Q6AZY7 606 aa13.74□□□□□ -0.21
PRDM2-208ENST00000487453 LRSAM1Q6UWE0 723 aa13.74□□□□□ -0.21
PRDM2-208ENST00000487453 SV2AQ7L0J3 742 aa13.74□□□□□ -0.21
PRDM2-208ENST00000487453 HPDLQ96IR7 371 aa13.74□□□□□ -0.21
PRDM2-208ENST00000487453 IMPG2Q9BZV3 1241 aa13.74□□□□□ -0.21
PRDM2-208ENST00000487453 LMAN2LQ9H0V9 348 aa13.74□□□□□ -0.21
PRDM2-208ENST00000487453 TSPY26PQ9H489 355 aa13.74□□□□□ -0.21
PRDM2-208ENST00000487453 FANCLQ9NW38 375 aa13.74□□□□□ -0.21
PRDM2-208ENST00000487453 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.73□□□□□ -0.21
PRDM2-208ENST00000487453 SMTNL1A8MU46 457 aa13.73□□□□□ -0.21
PRDM2-208ENST00000487453 KPNA7A9QM74 516 aa13.73□□□□□ -0.21
PRDM2-208ENST00000487453 PES1O00541 588 aaKnown RBP13.73□□□□□ -0.21
PRDM2-208ENST00000487453 SPTLC1O15269 473 aa13.73□□□□□ -0.21
PRDM2-208ENST00000487453 LPXNO60711 386 aa13.73□□□□□ -0.21
PRDM2-208ENST00000487453 CST3P01034 146 aaPredicted RBP13.73□□□□□ -0.21
PRDM2-208ENST00000487453 AFPP02771 609 aaKnown RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms