RNA–Protein interactions for RNA: ENST00000487311.1

SRRT-212, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-212ENST00000487311 SUSD3Q96L08 255 aa17.71■□□□□ 0.43
SRRT-212ENST00000487311 TBC1D32Q96NH3 1257 aa17.71■□□□□ 0.43
SRRT-212ENST00000487311 ASB16Q96NS5 453 aa17.71■□□□□ 0.43
SRRT-212ENST00000487311 NTPCRQ9BSD7 190 aaKnown RBP17.71■□□□□ 0.43
SRRT-212ENST00000487311 HAPLN2Q9GZV7 340 aa17.71■□□□□ 0.43
SRRT-212ENST00000487311 ZFP14Q9HCL3 533 aa17.71■□□□□ 0.43
SRRT-212ENST00000487311 ZSCAN32Q9NX65 697 aa17.71■□□□□ 0.43
SRRT-212ENST00000487311 DAXXQ9UER7 740 aaPredicted RBP17.71■□□□□ 0.43
SRRT-212ENST00000487311 NDRG2Q9UN36 371 aaKnown RBP17.71■□□□□ 0.43
SRRT-212ENST00000487311 PCDHGA2Q9Y5H1 932 aa17.71■□□□□ 0.43
SRRT-212ENST00000487311 NCANO14594 1321 aa17.71■□□□□ 0.42
SRRT-212ENST00000487311 H7C4K7 107 aa17.7■□□□□ 0.42
SRRT-212ENST00000487311 VIPR2P41587 438 aa17.7■□□□□ 0.42
SRRT-212ENST00000487311 MAGEA9P43362 315 aa17.7■□□□□ 0.42
SRRT-212ENST00000487311 SPAG1Q07617 926 aa17.7■□□□□ 0.42
SRRT-212ENST00000487311 RAD51AP2Q09MP3 1159 aa17.7■□□□□ 0.42
SRRT-212ENST00000487311 TWF1Q12792 350 aa17.7■□□□□ 0.42
SRRT-212ENST00000487311 TPGS2Q68CL5 300 aa17.7■□□□□ 0.42
SRRT-212ENST00000487311 VITQ6UXI7 678 aa17.7■□□□□ 0.42
SRRT-212ENST00000487311 RNF19BQ6ZMZ0 732 aa17.7■□□□□ 0.42
SRRT-212ENST00000487311 MAP4K3Q8IVH8 894 aa17.7■□□□□ 0.42
SRRT-212ENST00000487311 DDX12PQ92771 950 aa17.7■□□□□ 0.42
SRRT-212ENST00000487311 TRMT61BQ9BVS5 477 aaKnown RBP17.7■□□□□ 0.42
SRRT-212ENST00000487311 ZNF334Q9HCZ1 680 aaPredicted RBP17.7■□□□□ 0.42
SRRT-212ENST00000487311 TUBGCP4Q9UGJ1 667 aa17.7■□□□□ 0.42
SRRT-212ENST00000487311 RBM19Q9Y4C8 960 aaKnown RBP17.7■□□□□ 0.42
SRRT-212ENST00000487311 NUB1Q9Y5A7 615 aa17.7■□□□□ 0.42
SRRT-212ENST00000487311 CACNA1AO00555 2505 aa17.7■□□□□ 0.42
SRRT-212ENST00000487311 ZNF197O14709 1029 aa17.69■□□□□ 0.42
SRRT-212ENST00000487311 SPTLC1O15269 473 aa17.69■□□□□ 0.42
SRRT-212ENST00000487311 NCAM2O15394 837 aa17.69■□□□□ 0.42
SRRT-212ENST00000487311 MICAL2O94851 1124 aa17.69■□□□□ 0.42
SRRT-212ENST00000487311 VNN2O95498 520 aa17.69■□□□□ 0.42
SRRT-212ENST00000487311 TDGF1P13385 188 aa17.69■□□□□ 0.42
SRRT-212ENST00000487311 TGM1P22735 817 aa17.69■□□□□ 0.42
SRRT-212ENST00000487311 GNL2Q13823 731 aaKnown RBP17.69■□□□□ 0.42
SRRT-212ENST00000487311 KRT79Q5XKE5 535 aa17.69■□□□□ 0.42
SRRT-212ENST00000487311 PDZD4Q76G19 769 aaPredicted RBP17.69■□□□□ 0.42
SRRT-212ENST00000487311 TMEM161BQ8NDZ6 487 aa17.69■□□□□ 0.42
SRRT-212ENST00000487311 DRC1Q96MC2 740 aa17.69■□□□□ 0.42
SRRT-212ENST00000487311 KIF2CQ99661 725 aa17.69■□□□□ 0.42
SRRT-212ENST00000487311 BRD9Q9H8M2 597 aa17.69■□□□□ 0.42
SRRT-212ENST00000487311 PRMT8Q9NR22 394 aaPredicted RBP17.69■□□□□ 0.42
SRRT-212ENST00000487311 AFF4Q9UHB7 1163 aaKnown RBP17.69■□□□□ 0.42
SRRT-212ENST00000487311 NOL7Q9UMY1 257 aaKnown RBP17.69■□□□□ 0.42
SRRT-212ENST00000487311 TIMM13Q9Y5L4 95 aaPredicted RBP17.69■□□□□ 0.42
SRRT-212ENST00000487311 CITO14578 2027 aa17.69■□□□□ 0.42
SRRT-212ENST00000487311 GDI1P31150 447 aa17.68■□□□□ 0.42
SRRT-212ENST00000487311 MCM4P33991 863 aa17.68■□□□□ 0.42
SRRT-212ENST00000487311 CYP4A22Q5TCH4 519 aa17.68■□□□□ 0.42
SRRT-212ENST00000487311 GPIHBP1Q8IV16 184 aa17.68■□□□□ 0.42
SRRT-212ENST00000487311 FAM184AQ8NB25 1140 aa17.68■□□□□ 0.42
SRRT-212ENST00000487311 DNASE1L2Q92874 299 aa17.68■□□□□ 0.42
SRRT-212ENST00000487311 SMARCD2Q92925 531 aa17.68■□□□□ 0.42
SRRT-212ENST00000487311 BORCS6Q96GS4 357 aa17.68■□□□□ 0.42
SRRT-212ENST00000487311 ZNF512Q96ME7 567 aaPredicted RBP17.68■□□□□ 0.42
SRRT-212ENST00000487311 PNMA5Q96PV4 448 aa17.68■□□□□ 0.42
SRRT-212ENST00000487311 PLIN2Q99541 437 aa17.68■□□□□ 0.42
SRRT-212ENST00000487311 EPC1Q9H2F5 836 aa17.68■□□□□ 0.42
SRRT-212ENST00000487311 CRISPLD1Q9H336 500 aa17.68■□□□□ 0.42
SRRT-212ENST00000487311 NCDNQ9UBB6 729 aa17.68■□□□□ 0.42
SRRT-212ENST00000487311 MRPS17Q9Y2R5 130 aaKnown RBP17.68■□□□□ 0.42
SRRT-212ENST00000487311 NPHP3-ACAD11A0A0J9YXS1 232 aa17.67■□□□□ 0.42
SRRT-212ENST00000487311 TOM1L1O75674 476 aa17.67■□□□□ 0.42
SRRT-212ENST00000487311 OR4Q2P0C623 313 aa17.67■□□□□ 0.42
SRRT-212ENST00000487311 MYL4P12829 197 aa17.67■□□□□ 0.42
SRRT-212ENST00000487311 EPHA5P54756 1037 aa17.67■□□□□ 0.42
SRRT-212ENST00000487311 HMGN5P82970 282 aaKnown RBP17.67■□□□□ 0.42
SRRT-212ENST00000487311 TEAD2Q15562 447 aa17.67■□□□□ 0.42
SRRT-212ENST00000487311 ZRSR1Q15695 479 aaKnown RBP17.67■□□□□ 0.42
SRRT-212ENST00000487311 ZBTB6Q15916 424 aa17.67■□□□□ 0.42
SRRT-212ENST00000487311 BEST2Q8NFU1 509 aa17.67■□□□□ 0.42
SRRT-212ENST00000487311 SPIRE2Q8WWL2 714 aa17.67■□□□□ 0.42
SRRT-212ENST00000487311 RSPRY1Q96DX4 576 aa17.67■□□□□ 0.42
SRRT-212ENST00000487311 LRRC3Q9BY71 257 aa17.67■□□□□ 0.42
SRRT-212ENST00000487311 C17orf75Q9HAS0 396 aa17.67■□□□□ 0.42
SRRT-212ENST00000487311 LMAN1LQ9HAT1 526 aa17.67■□□□□ 0.42
SRRT-212ENST00000487311 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.67■□□□□ 0.42
SRRT-212ENST00000487311 ANKFY1Q9P2R3 1169 aa17.67■□□□□ 0.42
SRRT-212ENST00000487311 PCDHB8Q9UN66 801 aa17.67■□□□□ 0.42
SRRT-212ENST00000487311 SMG5Q9UPR3 1016 aaKnown RBP17.67■□□□□ 0.42
SRRT-212ENST00000487311 STK24Q9Y6E0 443 aa17.67■□□□□ 0.42
SRRT-212ENST00000487311 F5P12259 2224 aa17.67■□□□□ 0.42
SRRT-212ENST00000487311 CEP250Q9BV73 2442 aa17.66■□□□□ 0.42
SRRT-212ENST00000487311 M0QZQ0 153 aa17.66■□□□□ 0.42
SRRT-212ENST00000487311 ARNTLO00327 626 aa17.66■□□□□ 0.42
SRRT-212ENST00000487311 CXCL8P10145 99 aa17.66■□□□□ 0.42
SRRT-212ENST00000487311 MAPTP10636 758 aaKnown RBP17.66■□□□□ 0.42
SRRT-212ENST00000487311 PLS3P13797 630 aa17.66■□□□□ 0.42
SRRT-212ENST00000487311 PSMC3P17980 439 aa17.66■□□□□ 0.42
SRRT-212ENST00000487311 GUCY2CP25092 1073 aa17.66■□□□□ 0.42
SRRT-212ENST00000487311 TNFSF9P41273 254 aa17.66■□□□□ 0.42
SRRT-212ENST00000487311 GUCY2FP51841 1108 aa17.66■□□□□ 0.42
SRRT-212ENST00000487311 ATXN1P54253 815 aaKnown RBP17.66■□□□□ 0.42
SRRT-212ENST00000487311 MCL1Q07820 350 aa17.66■□□□□ 0.42
SRRT-212ENST00000487311 GAS6Q14393 721 aa17.66■□□□□ 0.42
SRRT-212ENST00000487311 NOLC1Q14978 699 aaKnown RBP eCLIP17.66■□□□□ 0.42
SRRT-212ENST00000487311 IQCEQ6IPM2 695 aa17.66■□□□□ 0.42
SRRT-212ENST00000487311 ZNF280DQ6N043 979 aa17.66■□□□□ 0.42
SRRT-212ENST00000487311 DTHD1Q6ZMT9 781 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms