RNA–Protein interactions for RNA: ENST00000487068.1

NEK4-204, Transcript of NIMA related kinase 4, humanhuman

TSL 2

Gene NEK4, Length 631 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-204ENST00000487068 STRA6Q9BX79 667 aa11.08□□□□□ -0.64
NEK4-204ENST00000487068 KCNH6Q9H252 994 aa11.08□□□□□ -0.64
NEK4-204ENST00000487068 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.08□□□□□ -0.64
NEK4-204ENST00000487068 DZANK1Q9NVP4 752 aa11.08□□□□□ -0.64
NEK4-204ENST00000487068 HOOK1Q9UJC3 728 aaKnown RBP11.08□□□□□ -0.64
NEK4-204ENST00000487068 R3HCC1Q9Y3T6 440 aaKnown RBP11.08□□□□□ -0.64
NEK4-204ENST00000487068 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.08□□□□□ -0.64
NEK4-204ENST00000487068 C5orf42Q9H799 3197 aa11.08□□□□□ -0.64
NEK4-204ENST00000487068 FAM237AA0A1B0GTK4 181 aa11.07□□□□□ -0.64
NEK4-204ENST00000487068 KIAA0391O15091 583 aaKnown RBP11.07□□□□□ -0.64
NEK4-204ENST00000487068 CLIC2O15247 247 aa11.07□□□□□ -0.64
NEK4-204ENST00000487068 TEX28O15482 410 aa11.07□□□□□ -0.64
NEK4-204ENST00000487068 MEFVO15553 781 aaPredicted RBP11.07□□□□□ -0.64
NEK4-204ENST00000487068 MBTPS2O43462 519 aa11.07□□□□□ -0.64
NEK4-204ENST00000487068 KINO60870 393 aaKnown RBP11.07□□□□□ -0.64
NEK4-204ENST00000487068 TMEM191BP0C7N4 346 aa11.07□□□□□ -0.64
NEK4-204ENST00000487068 TKTP29401 623 aaKnown RBP11.07□□□□□ -0.64
NEK4-204ENST00000487068 ADSSP30520 456 aa11.07□□□□□ -0.64
NEK4-204ENST00000487068 RPL9P32969 192 aaKnown RBP11.07□□□□□ -0.64
NEK4-204ENST00000487068 TFAMQ00059 246 aaKnown RBP11.07□□□□□ -0.64
NEK4-204ENST00000487068 NHLH1Q02575 133 aa11.07□□□□□ -0.64
NEK4-204ENST00000487068 FAM160A1Q05DH4 1040 aa11.07□□□□□ -0.64
NEK4-204ENST00000487068 PDAP1Q13442 181 aaKnown RBP11.07□□□□□ -0.64
NEK4-204ENST00000487068 COL19A1Q14993 1142 aa11.07□□□□□ -0.64
NEK4-204ENST00000487068 RARS2Q5T160 578 aaKnown RBP11.07□□□□□ -0.64
NEK4-204ENST00000487068 ANKRD54Q6NXT1 300 aa11.07□□□□□ -0.64
NEK4-204ENST00000487068 DSTYKQ6XUX3 929 aa11.07□□□□□ -0.64
NEK4-204ENST00000487068 PALB2Q86YC2 1186 aa11.07□□□□□ -0.64
NEK4-204ENST00000487068 BRSK2Q8IWQ3 736 aa11.07□□□□□ -0.64
NEK4-204ENST00000487068 RNF168Q8IYW5 571 aaPredicted RBP11.07□□□□□ -0.64
NEK4-204ENST00000487068 SMRP1Q8NCR6 262 aa11.07□□□□□ -0.64
NEK4-204ENST00000487068 ASB7Q9H672 318 aa11.07□□□□□ -0.64
NEK4-204ENST00000487068 MAN1C1Q9NR34 630 aa11.07□□□□□ -0.64
NEK4-204ENST00000487068 HSPBP1Q9NZL4 362 aa11.07□□□□□ -0.64
NEK4-204ENST00000487068 CLEC1BQ9P126 229 aa11.07□□□□□ -0.64
NEK4-204ENST00000487068 DPP7Q9UHL4 492 aa11.07□□□□□ -0.64
NEK4-204ENST00000487068 STYXL1Q9Y6J8 313 aa11.07□□□□□ -0.64
NEK4-204ENST00000487068 PIEZO1Q92508 2521 aa11.06□□□□□ -0.64
NEK4-204ENST00000487068 MYO10Q9HD67 2058 aa11.06□□□□□ -0.64
NEK4-204ENST00000487068 KLRC4O43908 158 aa11.06□□□□□ -0.64
NEK4-204ENST00000487068 EXTL3O43909 919 aa11.06□□□□□ -0.64
NEK4-204ENST00000487068 KIF20AO95235 890 aa11.06□□□□□ -0.64
NEK4-204ENST00000487068 KRT19P08727 400 aa11.06□□□□□ -0.64
NEK4-204ENST00000487068 SPATA31D3P0C874 917 aa11.06□□□□□ -0.64
NEK4-204ENST00000487068 CYP3A5P20815 502 aa11.06□□□□□ -0.64
NEK4-204ENST00000487068 SP100P23497 879 aaPredicted RBP11.06□□□□□ -0.64
NEK4-204ENST00000487068 CLCN4P51793 760 aa11.06□□□□□ -0.64
NEK4-204ENST00000487068 ARPP19P56211 112 aa11.06□□□□□ -0.64
NEK4-204ENST00000487068 EHHADHQ08426 723 aa11.06□□□□□ -0.64
NEK4-204ENST00000487068 PSMD2Q13200 908 aa11.06□□□□□ -0.64
NEK4-204ENST00000487068 PNOCQ13519 176 aa11.06□□□□□ -0.64
NEK4-204ENST00000487068 KNOP1Q1ED39 458 aaKnown RBP11.06□□□□□ -0.64
NEK4-204ENST00000487068 KIAA0319Q5VV43 1072 aa11.06□□□□□ -0.64
NEK4-204ENST00000487068 SPATA31D4Q6ZUB0 917 aa11.06□□□□□ -0.64
NEK4-204ENST00000487068 ANKS3Q6ZW76 656 aa11.06□□□□□ -0.64
NEK4-204ENST00000487068 EPM2AIP1Q7L775 607 aaPredicted RBP11.06□□□□□ -0.64
NEK4-204ENST00000487068 TMEM130Q8N3G9 435 aa11.06□□□□□ -0.64
NEK4-204ENST00000487068 RDH13Q8NBN7 331 aa11.06□□□□□ -0.64
NEK4-204ENST00000487068 KIAA0895Q8NCT3 520 aa11.06□□□□□ -0.64
NEK4-204ENST00000487068 ZSWIM2Q8NEG5 633 aa11.06□□□□□ -0.64
NEK4-204ENST00000487068 ZNF507Q8TCN5 953 aa11.06□□□□□ -0.64
NEK4-204ENST00000487068 SCFD1Q8WVM8 642 aa11.06□□□□□ -0.64
NEK4-204ENST00000487068 PIK3R5Q8WYR1 880 aa11.06□□□□□ -0.64
NEK4-204ENST00000487068 MSLNLQ96KJ4 702 aa11.06□□□□□ -0.64
NEK4-204ENST00000487068 FBXL18Q96ME1 805 aa11.06□□□□□ -0.64
NEK4-204ENST00000487068 ZNF560Q96MR9 790 aa11.06□□□□□ -0.64
NEK4-204ENST00000487068 TSPAN18Q96SJ8 248 aa11.06□□□□□ -0.64
NEK4-204ENST00000487068 SFXN1Q9H9B4 322 aa11.06□□□□□ -0.64
NEK4-204ENST00000487068 AGPAT3Q9NRZ7 376 aa11.06□□□□□ -0.64
NEK4-204ENST00000487068 DERAQ9Y315 318 aa11.06□□□□□ -0.64
NEK4-204ENST00000487068 C2CD2Q9Y426 696 aa11.06□□□□□ -0.64
NEK4-204ENST00000487068 USP15Q9Y4E8 981 aaPredicted RBP11.06□□□□□ -0.64
NEK4-204ENST00000487068 DOCK8Q8NF50 2099 aa11.05□□□□□ -0.64
NEK4-204ENST00000487068 ZNF233A6NK53 670 aa11.05□□□□□ -0.64
NEK4-204ENST00000487068 EXOC3O60645 756 aa11.05□□□□□ -0.64
NEK4-204ENST00000487068 TNNC2P02585 160 aa11.05□□□□□ -0.64
NEK4-204ENST00000487068 WEE2P0C1S8 567 aa11.05□□□□□ -0.64
NEK4-204ENST00000487068 CPB1P15086 417 aa11.05□□□□□ -0.64
NEK4-204ENST00000487068 HOXB8P17481 243 aaPredicted RBP11.05□□□□□ -0.64
NEK4-204ENST00000487068 FGFR3P22607 806 aa11.05□□□□□ -0.64
NEK4-204ENST00000487068 LRPAP1P30533 357 aa11.05□□□□□ -0.64
NEK4-204ENST00000487068 DPYDQ12882 1025 aa11.05□□□□□ -0.64
NEK4-204ENST00000487068 STK4Q13043 487 aa11.05□□□□□ -0.64
NEK4-204ENST00000487068 CBX2Q14781 532 aaPredicted RBP11.05□□□□□ -0.64
NEK4-204ENST00000487068 SNRNP35Q16560 246 aaKnown RBP11.05□□□□□ -0.64
NEK4-204ENST00000487068 VARS2Q5ST30 1063 aaKnown RBP11.05□□□□□ -0.64
NEK4-204ENST00000487068 LIN9Q5TKA1 542 aa11.05□□□□□ -0.64
NEK4-204ENST00000487068 SPATA1Q5VX52 437 aa11.05□□□□□ -0.64
NEK4-204ENST00000487068 LMBRD2Q68DH5 695 aaPredicted RBP11.05□□□□□ -0.64
NEK4-204ENST00000487068 ZNF280DQ6N043 979 aa11.05□□□□□ -0.64
NEK4-204ENST00000487068 CRELD2Q6UXH1 353 aaPredicted RBP11.05□□□□□ -0.64
NEK4-204ENST00000487068 TMC5Q6UXY8 1006 aa11.05□□□□□ -0.64
NEK4-204ENST00000487068 USP37Q86T82 979 aa11.05□□□□□ -0.64
NEK4-204ENST00000487068 CBWD2Q8IUF1 395 aa11.05□□□□□ -0.64
NEK4-204ENST00000487068 EFCAB13Q8IY85 973 aa11.05□□□□□ -0.64
NEK4-204ENST00000487068 FMR1NBQ8N0W7 255 aaPredicted RBP11.05□□□□□ -0.64
NEK4-204ENST00000487068 C12orf76Q8N812 135 aaPredicted RBP11.05□□□□□ -0.64
NEK4-204ENST00000487068 XXYLT1Q8NBI6 393 aa11.05□□□□□ -0.64
NEK4-204ENST00000487068 APPL2Q8NEU8 664 aa11.05□□□□□ -0.64
NEK4-204ENST00000487068 GOLGA5Q8TBA6 731 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms