RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 XKR5Q6UX68 686 aa5.98□□□□□ -1.45
SF1-217ENST00000486960 AGMOQ6ZNB7 445 aa5.98□□□□□ -1.45
SF1-217ENST00000486960 RUFY4Q6ZNE9 571 aa5.98□□□□□ -1.45
SF1-217ENST00000486960 CCDC84Q86UT8 332 aaPredicted RBP5.98□□□□□ -1.45
SF1-217ENST00000486960 SLC9A9Q8IVB4 645 aa5.98□□□□□ -1.45
SF1-217ENST00000486960 KRT78Q8N1N4 520 aa5.98□□□□□ -1.45
SF1-217ENST00000486960 TMEM102Q8N9M5 508 aaPredicted RBP5.98□□□□□ -1.45
SF1-217ENST00000486960 ZSCAN18Q8TBC5 510 aaPredicted RBP5.98□□□□□ -1.45
SF1-217ENST00000486960 RNF166Q96A37 237 aaPredicted RBP5.98□□□□□ -1.45
SF1-217ENST00000486960 MFSD14AQ96MC6 490 aa5.98□□□□□ -1.45
SF1-217ENST00000486960 RBM14Q96PK6 669 aaKnown RBP5.98□□□□□ -1.45
SF1-217ENST00000486960 RHOXF2Q9BQY4 288 aa5.98□□□□□ -1.45
SF1-217ENST00000486960 UTP14AQ9BVJ6 771 aaKnown RBP5.98□□□□□ -1.45
SF1-217ENST00000486960 PBX4Q9BYU1 374 aa5.98□□□□□ -1.45
SF1-217ENST00000486960 EDEM3Q9BZQ6 932 aa5.98□□□□□ -1.45
SF1-217ENST00000486960 TRIM5Q9C035 493 aa5.98□□□□□ -1.45
SF1-217ENST00000486960 MROH8Q9H579 483 aa5.98□□□□□ -1.45
SF1-217ENST00000486960 ELP3Q9H9T3 547 aa5.98□□□□□ -1.45
SF1-217ENST00000486960 BRMS1Q9HCU9 246 aa5.98□□□□□ -1.45
SF1-217ENST00000486960 CCDC177Q9NQR7 707 aaPredicted RBP5.98□□□□□ -1.45
SF1-217ENST00000486960 MARK1Q9P0L2 795 aa5.98□□□□□ -1.45
SF1-217ENST00000486960 CHORDC1Q9UHD1 332 aaPredicted RBP5.98□□□□□ -1.45
SF1-217ENST00000486960 MTUS1Q9ULD2 1270 aa5.98□□□□□ -1.45
SF1-217ENST00000486960 ADAMTS8Q9UP79 889 aa5.98□□□□□ -1.45
SF1-217ENST00000486960 NIP7Q9Y221 180 aaKnown RBP eCLIP5.98□□□□□ -1.45
SF1-217ENST00000486960 SOBPA7XYQ1 873 aa5.97□□□□□ -1.45
SF1-217ENST00000486960 UBXN8O00124 270 aa5.97□□□□□ -1.45
SF1-217ENST00000486960 WNT10BO00744 389 aa5.97□□□□□ -1.45
SF1-217ENST00000486960 DCXO43602 365 aa5.97□□□□□ -1.45
SF1-217ENST00000486960 SOCS5O75159 536 aa5.97□□□□□ -1.45
SF1-217ENST00000486960 FBXO24O75426 580 aa5.97□□□□□ -1.45
SF1-217ENST00000486960 SLC22A3O75751 556 aa5.97□□□□□ -1.45
SF1-217ENST00000486960 OPN1MWP04001 364 aa5.97□□□□□ -1.45
SF1-217ENST00000486960 CLTBP09497 229 aa5.97□□□□□ -1.45
SF1-217ENST00000486960 OPN1MW2P0DN77 364 aa5.97□□□□□ -1.45
SF1-217ENST00000486960 OPN1MW3P0DN78 364 aa5.97□□□□□ -1.45
SF1-217ENST00000486960 ALAS1P13196 640 aa5.97□□□□□ -1.45
SF1-217ENST00000486960 ALADP13716 330 aa5.97□□□□□ -1.45
SF1-217ENST00000486960 CAPN2P17655 700 aa5.97□□□□□ -1.45
SF1-217ENST00000486960 LAG3P18627 525 aa5.97□□□□□ -1.45
SF1-217ENST00000486960 GNAT2P19087 354 aa5.97□□□□□ -1.45
SF1-217ENST00000486960 TFEBP19484 476 aa5.97□□□□□ -1.45
SF1-217ENST00000486960 TFE3P19532 575 aaPredicted RBP5.97□□□□□ -1.45
SF1-217ENST00000486960 IL13P35225 146 aa5.97□□□□□ -1.45
SF1-217ENST00000486960 MATR3P43243 847 aaKnown RBP eCLIP5.97□□□□□ -1.45
SF1-217ENST00000486960 TUBP50607 506 aa5.97□□□□□ -1.45
SF1-217ENST00000486960 TKTL1P51854 596 aa5.97□□□□□ -1.45
SF1-217ENST00000486960 FCGRTP55899 365 aa5.97□□□□□ -1.45
SF1-217ENST00000486960 ARF3P61204 181 aaPredicted RBP5.97□□□□□ -1.45
SF1-217ENST00000486960 ARF1P84077 181 aaKnown RBP5.97□□□□□ -1.45
SF1-217ENST00000486960 TFCP2Q12800 502 aa5.97□□□□□ -1.45
SF1-217ENST00000486960 MMRN1Q13201 1228 aa5.97□□□□□ -1.45
SF1-217ENST00000486960 STARD3Q14849 445 aa5.97□□□□□ -1.45
SF1-217ENST00000486960 POSTNQ15063 836 aa5.97□□□□□ -1.45
SF1-217ENST00000486960 HLFQ16534 295 aa5.97□□□□□ -1.45
SF1-217ENST00000486960 PKDCCQ504Y2 493 aa5.97□□□□□ -1.45
SF1-217ENST00000486960 CEP55Q53EZ4 464 aa5.97□□□□□ -1.45
SF1-217ENST00000486960 ZMYM1Q5SVZ6 1142 aa5.97□□□□□ -1.45
SF1-217ENST00000486960 LMBR1LQ6UX01 489 aa5.97□□□□□ -1.45
SF1-217ENST00000486960 TTLL7Q6ZT98 887 aa5.97□□□□□ -1.45
SF1-217ENST00000486960 LPCAT2Q7L5N7 544 aa5.97□□□□□ -1.45
SF1-217ENST00000486960 CYP2U1Q7Z449 544 aa5.97□□□□□ -1.45
SF1-217ENST00000486960 BRAPQ7Z569 592 aa5.97□□□□□ -1.45
SF1-217ENST00000486960 TREML1Q86YW5 311 aa5.97□□□□□ -1.45
SF1-217ENST00000486960 NOSTRINQ8IVI9 506 aa5.97□□□□□ -1.45
SF1-217ENST00000486960 SYTL1Q8IYJ3 562 aa5.97□□□□□ -1.45
SF1-217ENST00000486960 ZNF280CQ8ND82 737 aa5.97□□□□□ -1.45
SF1-217ENST00000486960 ANKRD20A12PQ8NF67 263 aa5.97□□□□□ -1.45
SF1-217ENST00000486960 MOSPD2Q8NHP6 518 aa5.97□□□□□ -1.45
SF1-217ENST00000486960 OTUD7AQ8TE49 926 aaPredicted RBP5.97□□□□□ -1.45
SF1-217ENST00000486960 GATAD2BQ8WXI9 593 aa5.97□□□□□ -1.45
SF1-217ENST00000486960 RFFLQ8WZ73 363 aa5.97□□□□□ -1.45
SF1-217ENST00000486960 SHC3Q92529 594 aa5.97□□□□□ -1.45
SF1-217ENST00000486960 TMEM41AQ96HV5 264 aa5.97□□□□□ -1.45
SF1-217ENST00000486960 C7orf26Q96N11 449 aa5.97□□□□□ -1.45
SF1-217ENST00000486960 RUNDC3BQ96NL0 473 aa5.97□□□□□ -1.45
SF1-217ENST00000486960 USB1Q9BQ65 265 aaKnown RBP5.97□□□□□ -1.45
SF1-217ENST00000486960 DDX23Q9BUQ8 820 aaKnown RBP5.97□□□□□ -1.45
SF1-217ENST00000486960 ACAT2Q9BWD1 397 aa5.97□□□□□ -1.45
SF1-217ENST00000486960 LRRCC1Q9C099 1032 aa5.97□□□□□ -1.45
SF1-217ENST00000486960 NT5C3AQ9H0P0 336 aa5.97□□□□□ -1.45
SF1-217ENST00000486960 TSPYL1Q9H0U9 437 aa5.97□□□□□ -1.45
SF1-217ENST00000486960 OR10A4Q9H209 315 aa5.97□□□□□ -1.45
SF1-217ENST00000486960 CLSTN2Q9H4D0 955 aa5.97□□□□□ -1.45
SF1-217ENST00000486960 ARHGEF4Q9NR80 690 aa5.97□□□□□ -1.45
SF1-217ENST00000486960 KRT84Q9NSB2 600 aa5.97□□□□□ -1.45
SF1-217ENST00000486960 PSD3Q9NYI0 1048 aa5.97□□□□□ -1.45
SF1-217ENST00000486960 HECAQ9UBI9 543 aaPredicted RBP5.97□□□□□ -1.45
SF1-217ENST00000486960 NDOR1Q9UHB4 597 aa5.97□□□□□ -1.45
SF1-217ENST00000486960 INVSQ9Y283 1065 aa5.97□□□□□ -1.45
SF1-217ENST00000486960 AP1M2Q9Y6Q5 423 aa5.97□□□□□ -1.45
SF1-217ENST00000486960 DDX49Q9Y6V7 483 aaKnown RBP5.97□□□□□ -1.45
SF1-217ENST00000486960 RELNP78509 3460 aa5.97□□□□□ -1.45
SF1-217ENST00000486960 PI4KAP2A4QPH2 592 aa5.96□□□□□ -1.46
SF1-217ENST00000486960 GOLGA8AA7E2F4 631 aa5.96□□□□□ -1.46
SF1-217ENST00000486960 GOLGA8BA8MQT2 603 aa5.96□□□□□ -1.46
SF1-217ENST00000486960 TISP43B9A030 160 aa5.96□□□□□ -1.46
SF1-217ENST00000486960 B9A039 149 aa5.96□□□□□ -1.46
SF1-217ENST00000486960 KIF2AO00139 706 aaPredicted RBP5.96□□□□□ -1.46
SF1-217ENST00000486960 SGK1O00141 431 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms