RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 C11orf63Q6NUN7 778 aa12.45□□□□□ -0.42
PRKCB-207ENST00000486868 RUFY4Q6ZNE9 571 aa12.45□□□□□ -0.42
PRKCB-207ENST00000486868 FAM43BQ6ZT52 329 aaPredicted RBP12.45□□□□□ -0.42
PRKCB-207ENST00000486868 PDCL2Q8N4E4 241 aa12.45□□□□□ -0.42
PRKCB-207ENST00000486868 CEP120Q8N960 986 aa12.45□□□□□ -0.42
PRKCB-207ENST00000486868 C1orf127Q8N9H9 656 aa12.45□□□□□ -0.42
PRKCB-207ENST00000486868 PCSK9Q8NBP7 692 aaKnown RBP12.45□□□□□ -0.42
PRKCB-207ENST00000486868 RBBP8NLQ8NC74 664 aaPredicted RBP12.45□□□□□ -0.42
PRKCB-207ENST00000486868 MSANTD4Q8NCY6 345 aa12.45□□□□□ -0.42
PRKCB-207ENST00000486868 SLC35G2Q8TBE7 412 aa12.45□□□□□ -0.42
PRKCB-207ENST00000486868 DNAJB3Q8WWF6 145 aa12.45□□□□□ -0.42
PRKCB-207ENST00000486868 LENG1Q96BZ8 264 aaPredicted RBP12.45□□□□□ -0.42
PRKCB-207ENST00000486868 CPB2Q96IY4 423 aa12.45□□□□□ -0.42
PRKCB-207ENST00000486868 ZNF668Q96K58 619 aaPredicted RBP12.45□□□□□ -0.42
PRKCB-207ENST00000486868 RPS6KC1Q96S38 1066 aa12.45□□□□□ -0.42
PRKCB-207ENST00000486868 ZNF518BQ9C0D4 1074 aa12.45□□□□□ -0.42
PRKCB-207ENST00000486868 FAM49AQ9H0Q0 323 aaPredicted RBP12.45□□□□□ -0.42
PRKCB-207ENST00000486868 SEPT11Q9NVA2 429 aaKnown RBP12.45□□□□□ -0.42
PRKCB-207ENST00000486868 LCMT1Q9UIC8 334 aa12.45□□□□□ -0.42
PRKCB-207ENST00000486868 SIX4Q9UIU6 781 aa12.45□□□□□ -0.42
PRKCB-207ENST00000486868 MIF4GDA9UHW6 222 aaKnown RBP12.44□□□□□ -0.42
PRKCB-207ENST00000486868 AOC2O75106 756 aa12.44□□□□□ -0.42
PRKCB-207ENST00000486868 CAPN15O75808 1086 aa12.44□□□□□ -0.42
PRKCB-207ENST00000486868 KIF4AO95239 1232 aa12.44□□□□□ -0.42
PRKCB-207ENST00000486868 PAEPP09466 180 aa12.44□□□□□ -0.42
PRKCB-207ENST00000486868 H2AFXP16104 143 aaPredicted RBP12.44□□□□□ -0.42
PRKCB-207ENST00000486868 CDH5P33151 784 aaPredicted RBP12.44□□□□□ -0.42
PRKCB-207ENST00000486868 YARSP54577 528 aaKnown RBP12.44□□□□□ -0.42
PRKCB-207ENST00000486868 HIC1Q14526 733 aa12.44□□□□□ -0.42
PRKCB-207ENST00000486868 ELF2Q15723 593 aa12.44□□□□□ -0.42
PRKCB-207ENST00000486868 ZBTB6Q15916 424 aa12.44□□□□□ -0.42
PRKCB-207ENST00000486868 CFAP221Q4G0U5 840 aa12.44□□□□□ -0.42
PRKCB-207ENST00000486868 ZNF667Q5HYK9 610 aa12.44□□□□□ -0.42
PRKCB-207ENST00000486868 JADE1Q6IE81 842 aa12.44□□□□□ -0.42
PRKCB-207ENST00000486868 SPOPLQ6IQ16 392 aa12.44□□□□□ -0.42
PRKCB-207ENST00000486868 ALKAL1Q6UXT8 129 aa12.44□□□□□ -0.42
PRKCB-207ENST00000486868 PALB2Q86YC2 1186 aa12.44□□□□□ -0.42
PRKCB-207ENST00000486868 PHF13Q86YI8 300 aaPredicted RBP12.44□□□□□ -0.42
PRKCB-207ENST00000486868 MMGT1Q8N4V1 131 aa12.44□□□□□ -0.42
PRKCB-207ENST00000486868 FAM212AQ96EL1 285 aa12.44□□□□□ -0.42
PRKCB-207ENST00000486868 SNX27Q96L92 541 aa12.44□□□□□ -0.42
PRKCB-207ENST00000486868 OSMRQ99650 979 aa12.44□□□□□ -0.42
PRKCB-207ENST00000486868 SEZ6LQ9BYH1 1024 aa12.44□□□□□ -0.42
PRKCB-207ENST00000486868 CELF4Q9BZC1 486 aaKnown RBP12.44□□□□□ -0.42
PRKCB-207ENST00000486868 THAP2Q9H0W7 228 aa12.44□□□□□ -0.42
PRKCB-207ENST00000486868 CHST12Q9NRB3 414 aa12.44□□□□□ -0.42
PRKCB-207ENST00000486868 ARGLU1Q9NWB6 273 aaPredicted RBP12.44□□□□□ -0.42
PRKCB-207ENST00000486868 TAS2R14Q9NYV8 317 aa12.44□□□□□ -0.42
PRKCB-207ENST00000486868 CNTN3Q9P232 1028 aa12.44□□□□□ -0.42
PRKCB-207ENST00000486868 AMFRQ9UKV5 643 aa12.44□□□□□ -0.42
PRKCB-207ENST00000486868 KIAA1257Q9ULG3 409 aa12.44□□□□□ -0.42
PRKCB-207ENST00000486868 TTC7AQ9ULT0 858 aaPredicted RBP12.44□□□□□ -0.42
PRKCB-207ENST00000486868 PCDHGC3Q9UN70 934 aa12.44□□□□□ -0.42
PRKCB-207ENST00000486868 TARSL2A2RTX5 802 aaKnown RBP12.43□□□□□ -0.42
PRKCB-207ENST00000486868 M0QZ92 97 aa12.43□□□□□ -0.42
PRKCB-207ENST00000486868 MEFVO15553 781 aaPredicted RBP12.43□□□□□ -0.42
PRKCB-207ENST00000486868 XPOTO43592 962 aaKnown RBP12.43□□□□□ -0.42
PRKCB-207ENST00000486868 CAND2O75155 1236 aa12.43□□□□□ -0.42
PRKCB-207ENST00000486868 NFICP08651 508 aa12.43□□□□□ -0.42
PRKCB-207ENST00000486868 FAM163BP0C2L3 166 aa12.43□□□□□ -0.42
PRKCB-207ENST00000486868 KCNE1P15382 129 aa12.43□□□□□ -0.42
PRKCB-207ENST00000486868 CYP3A5P20815 502 aa12.43□□□□□ -0.42
PRKCB-207ENST00000486868 MCM3P25205 808 aa12.43□□□□□ -0.42
PRKCB-207ENST00000486868 GNA15P30679 374 aa12.43□□□□□ -0.42
PRKCB-207ENST00000486868 ASPAP45381 313 aa12.43□□□□□ -0.42
PRKCB-207ENST00000486868 MRPS6P82932 125 aaKnown RBP12.43□□□□□ -0.42
PRKCB-207ENST00000486868 C1QBPQ07021 282 aaKnown RBP12.43□□□□□ -0.42
PRKCB-207ENST00000486868 NBPF20Q3BBV1 942 aa12.43□□□□□ -0.42
PRKCB-207ENST00000486868 TMEM270Q6UE05 265 aa12.43□□□□□ -0.42
PRKCB-207ENST00000486868 PEX26Q7Z412 305 aa12.43□□□□□ -0.42
PRKCB-207ENST00000486868 NT5DC3Q86UY8 548 aa12.43□□□□□ -0.42
PRKCB-207ENST00000486868 SERINC5Q86VE9 423 aa12.43□□□□□ -0.42
PRKCB-207ENST00000486868 CDR2LQ86X02 465 aaPredicted RBP12.43□□□□□ -0.42
PRKCB-207ENST00000486868 TMEM192Q8IY95 271 aa12.43□□□□□ -0.42
PRKCB-207ENST00000486868 MCOLN2Q8IZK6 566 aa12.43□□□□□ -0.42
PRKCB-207ENST00000486868 LRRC52Q8N7C0 313 aa12.43□□□□□ -0.42
PRKCB-207ENST00000486868 LRRN4CLQ8ND94 238 aa12.43□□□□□ -0.42
PRKCB-207ENST00000486868 ACTRT1Q8TDG2 376 aa12.43□□□□□ -0.42
PRKCB-207ENST00000486868 HES6Q96HZ4 224 aa12.43□□□□□ -0.42
PRKCB-207ENST00000486868 ARID3AQ99856 593 aa12.43□□□□□ -0.42
PRKCB-207ENST00000486868 TSEN34Q9BSV6 310 aaKnown RBP12.43□□□□□ -0.42
PRKCB-207ENST00000486868 SELENOOQ9BVL4 669 aa12.43□□□□□ -0.42
PRKCB-207ENST00000486868 XPNPEP3Q9NQH7 507 aa12.43□□□□□ -0.42
PRKCB-207ENST00000486868 CISHQ9NSE2 258 aa12.43□□□□□ -0.42
PRKCB-207ENST00000486868 RNF186Q9NXI6 227 aa12.43□□□□□ -0.42
PRKCB-207ENST00000486868 SAGE1Q9NXZ1 904 aa12.43□□□□□ -0.42
PRKCB-207ENST00000486868 RAB21Q9UL25 225 aa12.43□□□□□ -0.42
PRKCB-207ENST00000486868 TRPV2Q9Y5S1 764 aa12.43□□□□□ -0.42
PRKCB-207ENST00000486868 SQORQ9Y6N5 450 aa12.43□□□□□ -0.42
PRKCB-207ENST00000486868 CASP8AP2Q9UKL3 1982 aa12.42□□□□□ -0.42
PRKCB-207ENST00000486868 MYADML2A6NDP7 307 aa12.42□□□□□ -0.42
PRKCB-207ENST00000486868 MED7O43513 233 aa12.42□□□□□ -0.42
PRKCB-207ENST00000486868 BUB1BO60566 1050 aaPredicted RBP12.42□□□□□ -0.42
PRKCB-207ENST00000486868 CSDE1O75534 798 aaKnown RBP12.42□□□□□ -0.42
PRKCB-207ENST00000486868 NPTXRO95502 500 aa12.42□□□□□ -0.42
PRKCB-207ENST00000486868 CD4P01730 458 aa12.42□□□□□ -0.42
PRKCB-207ENST00000486868 PRKAR2AP13861 404 aaKnown RBP12.42□□□□□ -0.42
PRKCB-207ENST00000486868 OSTNP61366 133 aa12.42□□□□□ -0.42
PRKCB-207ENST00000486868 BRD3Q15059 726 aa12.42□□□□□ -0.42
PRKCB-207ENST00000486868 GLE1Q53GS7 698 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms