RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 ZBED1O96006 694 aa14.02□□□□□ -0.16
HMGN1-216ENST00000486741 INHBAP08476 426 aa14.02□□□□□ -0.16
HMGN1-216ENST00000486741 CTSHP09668 335 aa14.02□□□□□ -0.16
HMGN1-216ENST00000486741 ZNF286BP0CG31 522 aa14.02□□□□□ -0.16
HMGN1-216ENST00000486741 RARBP10826 455 aa14.02□□□□□ -0.16
HMGN1-216ENST00000486741 NAMPTP43490 491 aa14.02□□□□□ -0.16
HMGN1-216ENST00000486741 IRAK1P51617 712 aa14.02□□□□□ -0.16
HMGN1-216ENST00000486741 TAF12Q16514 161 aa14.02□□□□□ -0.16
HMGN1-216ENST00000486741 KIZQ2M2Z5 673 aa14.02□□□□□ -0.16
HMGN1-216ENST00000486741 CATSPERGQ6ZRH7 1159 aa14.02□□□□□ -0.16
HMGN1-216ENST00000486741 ZBED8Q8IZ13 594 aa14.02□□□□□ -0.16
HMGN1-216ENST00000486741 CCDC197Q8NCU1 140 aa14.02□□□□□ -0.16
HMGN1-216ENST00000486741 GPRC5AQ8NFJ5 357 aa14.02□□□□□ -0.16
HMGN1-216ENST00000486741 CCDC110Q8TBZ0 833 aa14.02□□□□□ -0.16
HMGN1-216ENST00000486741 ARHGEF2Q92974 986 aaKnown RBP14.02□□□□□ -0.16
HMGN1-216ENST00000486741 KLK14Q9P0G3 267 aa14.02□□□□□ -0.16
HMGN1-216ENST00000486741 KLHL14Q9P2G3 628 aa14.02□□□□□ -0.16
HMGN1-216ENST00000486741 GGT7Q9UJ14 662 aa14.02□□□□□ -0.16
HMGN1-216ENST00000486741 UBA1P22314 1058 aaKnown RBP14.02□□□□□ -0.16
HMGN1-216ENST00000486741 MARCKSL1P49006 195 aa14.02□□□□□ -0.16
HMGN1-216ENST00000486741 ADCY2Q08462 1091 aa14.02□□□□□ -0.16
HMGN1-216ENST00000486741 SPIRE1Q08AE8 756 aa14.02□□□□□ -0.16
HMGN1-216ENST00000486741 TREML2Q5T2D2 321 aa14.02□□□□□ -0.16
HMGN1-216ENST00000486741 FYB2Q5VWT5 728 aa14.02□□□□□ -0.16
HMGN1-216ENST00000486741 TRIM72Q6ZMU5 477 aa14.02□□□□□ -0.16
HMGN1-216ENST00000486741 AFG1LQ8WV93 481 aa14.02□□□□□ -0.16
HMGN1-216ENST00000486741 NIF3L1Q9GZT8 377 aa14.02□□□□□ -0.16
HMGN1-216ENST00000486741 MYH3P11055 1940 aa14.02□□□□□ -0.17
HMGN1-216ENST00000486741 A0A087WZ62 844 aa14.02□□□□□ -0.17
HMGN1-216ENST00000486741 RASSF10A6NK89 507 aa14.02□□□□□ -0.17
HMGN1-216ENST00000486741 SPDYE16A6NNV3 312 aaPredicted RBP14.02□□□□□ -0.17
HMGN1-216ENST00000486741 RASA4BC9J798 803 aa14.02□□□□□ -0.17
HMGN1-216ENST00000486741 RASA4O43374 803 aa14.02□□□□□ -0.17
HMGN1-216ENST00000486741 SLC25A27O95847 323 aa14.02□□□□□ -0.17
HMGN1-216ENST00000486741 GARTP22102 1010 aa14.02□□□□□ -0.17
HMGN1-216ENST00000486741 ARL1P40616 181 aaPredicted RBP14.02□□□□□ -0.17
HMGN1-216ENST00000486741 LLGL2Q6P1M3 1020 aa14.02□□□□□ -0.17
HMGN1-216ENST00000486741 PDIK1LQ8N165 341 aa14.02□□□□□ -0.17
HMGN1-216ENST00000486741 ASAP3Q8TDY4 903 aa14.02□□□□□ -0.17
HMGN1-216ENST00000486741 CALR3Q96L12 384 aaKnown RBP14.02□□□□□ -0.17
HMGN1-216ENST00000486741 MYCBPQ99417 103 aaPredicted RBP14.02□□□□□ -0.17
HMGN1-216ENST00000486741 SENP7Q9BQF6 1050 aa14.02□□□□□ -0.17
HMGN1-216ENST00000486741 FDXACB1Q9BRP7 624 aaPredicted RBP14.02□□□□□ -0.17
HMGN1-216ENST00000486741 TRIM66O15016 1216 aa14.01□□□□□ -0.17
HMGN1-216ENST00000486741 CXCL8P10145 99 aa14.01□□□□□ -0.17
HMGN1-216ENST00000486741 PYGMP11217 842 aa14.01□□□□□ -0.17
HMGN1-216ENST00000486741 HSD17B4P51659 736 aa14.01□□□□□ -0.17
HMGN1-216ENST00000486741 CDH8P55286 799 aa14.01□□□□□ -0.17
HMGN1-216ENST00000486741 TNFAIP2Q03169 654 aa14.01□□□□□ -0.17
HMGN1-216ENST00000486741 LAMTOR4Q0VGL1 99 aa14.01□□□□□ -0.17
HMGN1-216ENST00000486741 COBLL1Q53SF7 1204 aa14.01□□□□□ -0.17
HMGN1-216ENST00000486741 NIPA1Q7RTP0 329 aa14.01□□□□□ -0.17
HMGN1-216ENST00000486741 CLEC4DQ8WXI8 215 aa14.01□□□□□ -0.17
HMGN1-216ENST00000486741 CLGNO14967 610 aa14.01□□□□□ -0.17
HMGN1-216ENST00000486741 OGTO15294 1046 aa14.01□□□□□ -0.17
HMGN1-216ENST00000486741 XPOTO43592 962 aaKnown RBP14.01□□□□□ -0.17
HMGN1-216ENST00000486741 HBP1O60381 514 aa14.01□□□□□ -0.17
HMGN1-216ENST00000486741 TOM1L1O75674 476 aa14.01□□□□□ -0.17
HMGN1-216ENST00000486741 LCP1P13796 627 aa14.01□□□□□ -0.17
HMGN1-216ENST00000486741 PDIA2Q13087 525 aaKnown RBP14.01□□□□□ -0.17
HMGN1-216ENST00000486741 P3H1Q32P28 736 aa14.01□□□□□ -0.17
HMGN1-216ENST00000486741 MAP4K3Q8IVH8 894 aa14.01□□□□□ -0.17
HMGN1-216ENST00000486741 EMC1Q8N766 993 aa14.01□□□□□ -0.17
HMGN1-216ENST00000486741 ATL2Q8NHH9 583 aa14.01□□□□□ -0.17
HMGN1-216ENST00000486741 HVCN1Q96D96 273 aa14.01□□□□□ -0.17
HMGN1-216ENST00000486741 CFAP57Q96MR6 1250 aa14.01□□□□□ -0.17
HMGN1-216ENST00000486741 PCDHGC5Q9Y5F6 944 aa14.01□□□□□ -0.17
HMGN1-216ENST00000486741 ZNF541Q9H0D2 1346 aa14.01□□□□□ -0.17
HMGN1-216ENST00000486741 SPAG7O75391 227 aa14.01□□□□□ -0.17
HMGN1-216ENST00000486741 MYBL1P10243 752 aa14.01□□□□□ -0.17
HMGN1-216ENST00000486741 PDGFRAP16234 1089 aa14.01□□□□□ -0.17
HMGN1-216ENST00000486741 MSH2P43246 934 aa14.01□□□□□ -0.17
HMGN1-216ENST00000486741 SIX6OS1Q8N1H7 587 aa14.01□□□□□ -0.17
HMGN1-216ENST00000486741 CCDC33Q8N5R6 958 aa14.01□□□□□ -0.17
HMGN1-216ENST00000486741 LRRC8CQ8TDW0 803 aa14.01□□□□□ -0.17
HMGN1-216ENST00000486741 EPS8L1Q8TE68 723 aa14.01□□□□□ -0.17
HMGN1-216ENST00000486741 ZBTB10Q96DT7 871 aa14.01□□□□□ -0.17
HMGN1-216ENST00000486741 OPLAHO14841 1288 aa14.01□□□□□ -0.17
HMGN1-216ENST00000486741 GH1P01241 217 aa14.01□□□□□ -0.17
HMGN1-216ENST00000486741 BRAFP15056 766 aa14.01□□□□□ -0.17
HMGN1-216ENST00000486741 SDC4P31431 198 aa14.01□□□□□ -0.17
HMGN1-216ENST00000486741 COILP38432 576 aaPredicted RBP14.01□□□□□ -0.17
HMGN1-216ENST00000486741 ARPP19P56211 112 aa14.01□□□□□ -0.17
HMGN1-216ENST00000486741 MAPK7Q13164 816 aa14.01□□□□□ -0.17
HMGN1-216ENST00000486741 TMEM132DQ14C87 1099 aa14.01□□□□□ -0.17
HMGN1-216ENST00000486741 KCNV1Q6PIU1 500 aa14.01□□□□□ -0.17
HMGN1-216ENST00000486741 METTL7BQ6UX53 244 aa14.01□□□□□ -0.17
HMGN1-216ENST00000486741 DSTYKQ6XUX3 929 aa14.01□□□□□ -0.17
HMGN1-216ENST00000486741 CENPUQ71F23 418 aa14.01□□□□□ -0.17
HMGN1-216ENST00000486741 FAF2Q96CS3 445 aa14.01□□□□□ -0.17
HMGN1-216ENST00000486741 SNF8Q96H20 258 aa14.01□□□□□ -0.17
HMGN1-216ENST00000486741 STRIP2Q9ULQ0 834 aa14.01□□□□□ -0.17
HMGN1-216ENST00000486741 PHF20L1A8MW92 1017 aa14□□□□□ -0.17
HMGN1-216ENST00000486741 EPHX2P34913 555 aa14□□□□□ -0.17
HMGN1-216ENST00000486741 GTF2BQ00403 316 aa14□□□□□ -0.17
HMGN1-216ENST00000486741 TMC2Q8TDI7 906 aa14□□□□□ -0.17
HMGN1-216ENST00000486741 BSNDQ8WZ55 320 aa14□□□□□ -0.17
HMGN1-216ENST00000486741 GCOM2Q9BZD3 368 aaPredicted RBP14□□□□□ -0.17
HMGN1-216ENST00000486741 DHX35Q9H5Z1 703 aaKnown RBP14□□□□□ -0.17
HMGN1-216ENST00000486741 AJAP1Q9UKB5 411 aaPredicted RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms