RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 IGFBP6P24592 240 aaPredicted RBP13.99□□□□□ -0.17
CHMP3-208ENST00000486404 LRPAP1P30533 357 aa13.99□□□□□ -0.17
CHMP3-208ENST00000486404 ACOT2P49753 483 aa13.99□□□□□ -0.17
CHMP3-208ENST00000486404 CASP5P51878 434 aa13.99□□□□□ -0.17
CHMP3-208ENST00000486404 ARPP19P56211 112 aa13.99□□□□□ -0.17
CHMP3-208ENST00000486404 ZXDAP98168 799 aa13.99□□□□□ -0.17
CHMP3-208ENST00000486404 CTXN3Q4LDR2 81 aa13.99□□□□□ -0.17
CHMP3-208ENST00000486404 JADE1Q6IE81 842 aa13.99□□□□□ -0.17
CHMP3-208ENST00000486404 CD300LGQ6UXG3 332 aa13.99□□□□□ -0.17
CHMP3-208ENST00000486404 GET4Q7L5D6 327 aaPredicted RBP13.99□□□□□ -0.17
CHMP3-208ENST00000486404 CEP57L1Q8IYX8 460 aa13.99□□□□□ -0.17
CHMP3-208ENST00000486404 EDAQ92838 391 aa13.99□□□□□ -0.17
CHMP3-208ENST00000486404 SUSD3Q96L08 255 aa13.99□□□□□ -0.17
CHMP3-208ENST00000486404 RHOBTB2Q9BYZ6 727 aa13.99□□□□□ -0.17
CHMP3-208ENST00000486404 PRKD2Q9BZL6 878 aa13.99□□□□□ -0.17
CHMP3-208ENST00000486404 TRIM9Q9C026 710 aa13.99□□□□□ -0.17
CHMP3-208ENST00000486404 TMEM206Q9H813 350 aa13.99□□□□□ -0.17
CHMP3-208ENST00000486404 PCDHA7Q9UN72 937 aa13.99□□□□□ -0.17
CHMP3-208ENST00000486404 DERAQ9Y315 318 aa13.99□□□□□ -0.17
CHMP3-208ENST00000486404 ATP6V1DQ9Y5K8 247 aa13.99□□□□□ -0.17
CHMP3-208ENST00000486404 TECTAO75443 2155 aa13.99□□□□□ -0.17
CHMP3-208ENST00000486404 SCN1AP35498 2009 aa13.98□□□□□ -0.17
CHMP3-208ENST00000486404 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.98□□□□□ -0.17
CHMP3-208ENST00000486404 PRRG1O14668 218 aa13.98□□□□□ -0.17
CHMP3-208ENST00000486404 IL18RAPO95256 599 aa13.98□□□□□ -0.17
CHMP3-208ENST00000486404 HNRNPA1P09651 372 aaKnown RBP eCLIP13.98□□□□□ -0.17
CHMP3-208ENST00000486404 CPB1P15086 417 aa13.98□□□□□ -0.17
CHMP3-208ENST00000486404 ELF1P32519 619 aa13.98□□□□□ -0.17
CHMP3-208ENST00000486404 GUCY2FP51841 1108 aa13.98□□□□□ -0.17
CHMP3-208ENST00000486404 RAB33AQ14088 237 aa13.98□□□□□ -0.17
CHMP3-208ENST00000486404 AXDND1Q5T1B0 1012 aaPredicted RBP13.98□□□□□ -0.17
CHMP3-208ENST00000486404 RESP18Q5W5W9 173 aa13.98□□□□□ -0.17
CHMP3-208ENST00000486404 LILRA6Q6PI73 481 aa13.98□□□□□ -0.17
CHMP3-208ENST00000486404 DSTYKQ6XUX3 929 aa13.98□□□□□ -0.17
CHMP3-208ENST00000486404 USP37Q86T82 979 aa13.98□□□□□ -0.17
CHMP3-208ENST00000486404 ZDHHC14Q8IZN3 488 aa13.98□□□□□ -0.17
CHMP3-208ENST00000486404 FEZF2Q8TBJ5 459 aa13.98□□□□□ -0.17
CHMP3-208ENST00000486404 ZNF707Q96C28 371 aaPredicted RBP13.98□□□□□ -0.17
CHMP3-208ENST00000486404 SPATA32Q96LK8 384 aa13.98□□□□□ -0.17
CHMP3-208ENST00000486404 ASB7Q9H672 318 aa13.98□□□□□ -0.17
CHMP3-208ENST00000486404 WDR6Q9NNW5 1121 aaKnown RBP13.98□□□□□ -0.17
CHMP3-208ENST00000486404 KBTBD4Q9NVX7 518 aa13.98□□□□□ -0.17
CHMP3-208ENST00000486404 PCDHB8Q9UN66 801 aa13.98□□□□□ -0.17
CHMP3-208ENST00000486404 SORCS3Q9UPU3 1222 aa13.98□□□□□ -0.17
CHMP3-208ENST00000486404 C2CD2Q9Y426 696 aa13.98□□□□□ -0.17
CHMP3-208ENST00000486404 STYXL1Q9Y6J8 313 aa13.98□□□□□ -0.17
CHMP3-208ENST00000486404 KMT2EQ8IZD2 1858 aa13.97□□□□□ -0.17
CHMP3-208ENST00000486404 DOCK6Q96HP0 2047 aa13.97□□□□□ -0.17
CHMP3-208ENST00000486404 ARHGEF37A1IGU5 675 aa13.97□□□□□ -0.17
CHMP3-208ENST00000486404 TMEM221A6NGB7 291 aa13.97□□□□□ -0.17
CHMP3-208ENST00000486404 M0R296 226 aa13.97□□□□□ -0.17
CHMP3-208ENST00000486404 CCL16O15467 120 aa13.97□□□□□ -0.17
CHMP3-208ENST00000486404 PRPF6O94906 941 aaKnown RBP13.97□□□□□ -0.17
CHMP3-208ENST00000486404 LDHAP00338 332 aaKnown RBP13.97□□□□□ -0.17
CHMP3-208ENST00000486404 ODC1P11926 461 aa13.97□□□□□ -0.17
CHMP3-208ENST00000486404 HOXA9P31269 272 aa13.97□□□□□ -0.17
CHMP3-208ENST00000486404 ROR1Q01973 937 aa13.97□□□□□ -0.17
CHMP3-208ENST00000486404 SIGLEC14Q08ET2 396 aa13.97□□□□□ -0.17
CHMP3-208ENST00000486404 KCNA1Q09470 495 aa13.97□□□□□ -0.17
CHMP3-208ENST00000486404 FAM26FQ5R3K3 315 aa13.97□□□□□ -0.17
CHMP3-208ENST00000486404 SPATA1Q5VX52 437 aa13.97□□□□□ -0.17
CHMP3-208ENST00000486404 ARMCX5Q6P1M9 558 aa13.97□□□□□ -0.17
CHMP3-208ENST00000486404 TRIM67Q6ZTA4 783 aa13.97□□□□□ -0.17
CHMP3-208ENST00000486404 UBALD2Q8IYN6 164 aa13.97□□□□□ -0.17
CHMP3-208ENST00000486404 SAAL1Q96ER3 474 aa13.97□□□□□ -0.17
CHMP3-208ENST00000486404 FAM213AQ9BRX8 229 aa13.97□□□□□ -0.17
CHMP3-208ENST00000486404 STRA6Q9BX79 667 aa13.97□□□□□ -0.17
CHMP3-208ENST00000486404 FGFBP2Q9BYJ0 223 aa13.97□□□□□ -0.17
CHMP3-208ENST00000486404 IKZF4Q9H2S9 585 aa13.97□□□□□ -0.17
CHMP3-208ENST00000486404 RBAKQ9NYW8 714 aaPredicted RBP13.97□□□□□ -0.17
CHMP3-208ENST00000486404 LIMD1Q9UGP4 676 aa13.97□□□□□ -0.17
CHMP3-208ENST00000486404 UBE4BO95155 1302 aa13.96□□□□□ -0.17
CHMP3-208ENST00000486404 LRG1P02750 347 aa13.96□□□□□ -0.17
CHMP3-208ENST00000486404 ASGR2P07307 311 aa13.96□□□□□ -0.17
CHMP3-208ENST00000486404 GARTP22102 1010 aa13.96□□□□□ -0.17
CHMP3-208ENST00000486404 FSHRP23945 695 aa13.96□□□□□ -0.17
CHMP3-208ENST00000486404 YWHAHQ04917 246 aaPredicted RBP13.96□□□□□ -0.17
CHMP3-208ENST00000486404 SLC8B1Q6J4K2 584 aa13.96□□□□□ -0.17
CHMP3-208ENST00000486404 RSPO2Q6UXX9 243 aaPredicted RBP13.96□□□□□ -0.17
CHMP3-208ENST00000486404 BRSK2Q8IWQ3 736 aa13.96□□□□□ -0.17
CHMP3-208ENST00000486404 SUGP1Q8IWZ8 645 aaKnown RBP13.96□□□□□ -0.17
CHMP3-208ENST00000486404 ZNF560Q96MR9 790 aa13.96□□□□□ -0.17
CHMP3-208ENST00000486404 FBXL5Q9UKA1 691 aa13.96□□□□□ -0.17
CHMP3-208ENST00000486404 KCNH3Q9ULD8 1083 aa13.96□□□□□ -0.17
CHMP3-208ENST00000486404 WDR27A2RRH5 827 aa13.95□□□□□ -0.18
CHMP3-208ENST00000486404 M0QZQ0 153 aa13.95□□□□□ -0.18
CHMP3-208ENST00000486404 EIF3DO15371 548 aaKnown RBP eCLIP13.95□□□□□ -0.18
CHMP3-208ENST00000486404 ADRB2P07550 413 aa13.95□□□□□ -0.18
CHMP3-208ENST00000486404 PAX3P23760 479 aa13.95□□□□□ -0.18
CHMP3-208ENST00000486404 ADSSP30520 456 aa13.95□□□□□ -0.18
CHMP3-208ENST00000486404 AFMP43652 599 aa13.95□□□□□ -0.18
CHMP3-208ENST00000486404 POU5F1Q01860 360 aaKnown RBP13.95□□□□□ -0.18
CHMP3-208ENST00000486404 ZBTB6Q15916 424 aa13.95□□□□□ -0.18
CHMP3-208ENST00000486404 UVSSAQ2YD98 709 aa13.95□□□□□ -0.18
CHMP3-208ENST00000486404 C9orf57Q5W0N0 161 aa13.95□□□□□ -0.18
CHMP3-208ENST00000486404 HFE2Q6ZVN8 426 aa13.95□□□□□ -0.18
CHMP3-208ENST00000486404 UNC13DQ70J99 1090 aa13.95□□□□□ -0.18
CHMP3-208ENST00000486404 GRASPQ7Z6J2 395 aaPredicted RBP13.95□□□□□ -0.18
CHMP3-208ENST00000486404 NT5DC4Q86YG4 428 aa13.95□□□□□ -0.18
CHMP3-208ENST00000486404 TMEM130Q8N3G9 435 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms