RNA–Protein interactions for RNA: ENST00000486344.5

SHISA5-214, Transcript of shisa family member 5, humanhuman

TSL 2

Gene SHISA5, Length 713 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-214ENST00000486344 PRDM12Q9H4Q4 367 aa19.42■□□□□ 0.7
SHISA5-214ENST00000486344 LMCD1Q9NZU5 365 aa19.42■□□□□ 0.7
SHISA5-214ENST00000486344 AGAP1Q9UPQ3 857 aa19.42■□□□□ 0.7
SHISA5-214ENST00000486344 SF3B1O75533 1304 aaKnown RBP eCLIP19.42■□□□□ 0.7
SHISA5-214ENST00000486344 EPOPA6NHQ4 379 aa19.41■□□□□ 0.7
SHISA5-214ENST00000486344 F8W810 466 aa19.41■□□□□ 0.7
SHISA5-214ENST00000486344 GRM6O15303 877 aa19.41■□□□□ 0.7
SHISA5-214ENST00000486344 PHACTR2O75167 634 aa19.41■□□□□ 0.7
SHISA5-214ENST00000486344 EFEMP2O95967 443 aa19.41■□□□□ 0.7
SHISA5-214ENST00000486344 KRT19P08727 400 aa19.41■□□□□ 0.7
SHISA5-214ENST00000486344 POLR2BP30876 1174 aaKnown RBP19.41■□□□□ 0.7
SHISA5-214ENST00000486344 LILRA4P59901 499 aa19.41■□□□□ 0.7
SHISA5-214ENST00000486344 MYL5Q02045 173 aa19.41■□□□□ 0.7
SHISA5-214ENST00000486344 TCERG1LQ5VWI1 586 aa19.41■□□□□ 0.7
SHISA5-214ENST00000486344 CD300LGQ6UXG3 332 aa19.41■□□□□ 0.7
SHISA5-214ENST00000486344 SV2AQ7L0J3 742 aa19.41■□□□□ 0.7
SHISA5-214ENST00000486344 VPS52Q8N1B4 723 aa19.41■□□□□ 0.7
SHISA5-214ENST00000486344 DEFB123Q8N688 67 aa19.41■□□□□ 0.7
SHISA5-214ENST00000486344 LRRC52Q8N7C0 313 aa19.41■□□□□ 0.7
SHISA5-214ENST00000486344 C3orf58Q8NDZ4 430 aa19.41■□□□□ 0.7
SHISA5-214ENST00000486344 CXorf38Q8TB03 319 aa19.41■□□□□ 0.7
SHISA5-214ENST00000486344 ZNF560Q96MR9 790 aa19.41■□□□□ 0.7
SHISA5-214ENST00000486344 MAGEC2Q9UBF1 373 aaPredicted RBP19.41■□□□□ 0.7
SHISA5-214ENST00000486344 NFE2L3Q9Y4A8 694 aa19.41■□□□□ 0.7
SHISA5-214ENST00000486344 SMTNL1A8MU46 457 aa19.4■□□□□ 0.7
SHISA5-214ENST00000486344 RFXAPO00287 272 aa19.4■□□□□ 0.7
SHISA5-214ENST00000486344 LPXNO60711 386 aa19.4■□□□□ 0.7
SHISA5-214ENST00000486344 SOD2P04179 222 aa19.4■□□□□ 0.7
SHISA5-214ENST00000486344 TRIM49P0CI25 452 aa19.4■□□□□ 0.7
SHISA5-214ENST00000486344 TRIM49CP0CI26 452 aa19.4■□□□□ 0.7
SHISA5-214ENST00000486344 POU3F3P20264 500 aaPredicted RBP19.4■□□□□ 0.7
SHISA5-214ENST00000486344 TAF6P49848 677 aa19.4■□□□□ 0.7
SHISA5-214ENST00000486344 ZNF165P49910 485 aa19.4■□□□□ 0.7
SHISA5-214ENST00000486344 MYO1EQ12965 1108 aa19.4■□□□□ 0.7
SHISA5-214ENST00000486344 BIRC3Q13489 604 aa19.4■□□□□ 0.7
SHISA5-214ENST00000486344 TRPC3Q13507 836 aa19.4■□□□□ 0.7
SHISA5-214ENST00000486344 USP41Q3LFD5 358 aa19.4■□□□□ 0.7
SHISA5-214ENST00000486344 ZACNQ401N2 412 aa19.4■□□□□ 0.7
SHISA5-214ENST00000486344 IRF2BP1Q8IU81 584 aa19.4■□□□□ 0.7
SHISA5-214ENST00000486344 TRIM59Q8IWR1 403 aa19.4■□□□□ 0.7
SHISA5-214ENST00000486344 GPR65Q8IYL9 337 aa19.4■□□□□ 0.7
SHISA5-214ENST00000486344 RNF168Q8IYW5 571 aaPredicted RBP19.4■□□□□ 0.7
SHISA5-214ENST00000486344 HASPINQ8TF76 798 aa19.4■□□□□ 0.7
SHISA5-214ENST00000486344 GDPD5Q8WTR4 605 aa19.4■□□□□ 0.7
SHISA5-214ENST00000486344 SLC35C1Q96A29 364 aa19.4■□□□□ 0.7
SHISA5-214ENST00000486344 CNOT6LQ96LI5 555 aaKnown RBP19.4■□□□□ 0.7
SHISA5-214ENST00000486344 FAM161BQ96MY7 647 aa19.4■□□□□ 0.7
SHISA5-214ENST00000486344 GPR62Q9BZJ7 368 aa19.4■□□□□ 0.7
SHISA5-214ENST00000486344 TMEM8AQ9HCN3 771 aa19.4■□□□□ 0.7
SHISA5-214ENST00000486344 NGRNQ9NPE2 291 aaKnown RBP19.4■□□□□ 0.7
SHISA5-214ENST00000486344 TLR9Q9NR96 1032 aa19.4■□□□□ 0.7
SHISA5-214ENST00000486344 SIX4Q9UIU6 781 aa19.4■□□□□ 0.7
SHISA5-214ENST00000486344 SSX2IPQ9Y2D8 614 aa19.4■□□□□ 0.7
SHISA5-214ENST00000486344 ARHGEF37A1IGU5 675 aa19.39■□□□□ 0.69
SHISA5-214ENST00000486344 CST3P01034 146 aaPredicted RBP19.39■□□□□ 0.69
SHISA5-214ENST00000486344 ATICP31939 592 aa19.39■□□□□ 0.69
SHISA5-214ENST00000486344 GCLMP48507 274 aa19.39■□□□□ 0.69
SHISA5-214ENST00000486344 AARSP49588 968 aaKnown RBP eCLIP19.39■□□□□ 0.69
SHISA5-214ENST00000486344 PPP3CAQ08209 521 aa19.39■□□□□ 0.69
SHISA5-214ENST00000486344 SV2CQ496J9 727 aa19.39■□□□□ 0.69
SHISA5-214ENST00000486344 TIGD5Q53EQ6 642 aa19.39■□□□□ 0.69
SHISA5-214ENST00000486344 DCAF17Q5H9S7 520 aaPredicted RBP19.39■□□□□ 0.69
SHISA5-214ENST00000486344 TDRD10Q5VZ19 366 aaKnown RBP19.39■□□□□ 0.69
SHISA5-214ENST00000486344 KRT39Q6A163 491 aa19.39■□□□□ 0.69
SHISA5-214ENST00000486344 C15orf39Q6ZRI6 1047 aa19.39■□□□□ 0.69
SHISA5-214ENST00000486344 CREBRFQ8IUR6 639 aa19.39■□□□□ 0.69
SHISA5-214ENST00000486344 MRPL38Q96DV4 380 aaKnown RBP19.39■□□□□ 0.69
SHISA5-214ENST00000486344 SUSD3Q96L08 255 aa19.39■□□□□ 0.69
SHISA5-214ENST00000486344 GAS2L1Q99501 681 aaPredicted RBP19.39■□□□□ 0.69
SHISA5-214ENST00000486344 VN1R3Q9BXE9 311 aa19.39■□□□□ 0.69
SHISA5-214ENST00000486344 CHST7Q9NS84 486 aa19.39■□□□□ 0.69
SHISA5-214ENST00000486344 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.39■□□□□ 0.69
SHISA5-214ENST00000486344 CHD9Q3L8U1 2897 aa19.38■□□□□ 0.69
SHISA5-214ENST00000486344 KPNA7A9QM74 516 aa19.38■□□□□ 0.69
SHISA5-214ENST00000486344 PPEF2O14830 753 aa19.38■□□□□ 0.69
SHISA5-214ENST00000486344 SYN3O14994 580 aa19.38■□□□□ 0.69
SHISA5-214ENST00000486344 CTSAP10619 480 aa19.38■□□□□ 0.69
SHISA5-214ENST00000486344 IGFBP6P24592 240 aaPredicted RBP19.38■□□□□ 0.69
SHISA5-214ENST00000486344 DNAJB1P25685 340 aa19.38■□□□□ 0.69
SHISA5-214ENST00000486344 BRCC3P46736 316 aa19.38■□□□□ 0.69
SHISA5-214ENST00000486344 CAMK1Q14012 370 aa19.38■□□□□ 0.69
SHISA5-214ENST00000486344 FAM171A1Q5VUB5 890 aa19.38■□□□□ 0.69
SHISA5-214ENST00000486344 KIAA1841Q6NSI8 718 aa19.38■□□□□ 0.69
SHISA5-214ENST00000486344 DSTYKQ6XUX3 929 aa19.38■□□□□ 0.69
SHISA5-214ENST00000486344 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.38■□□□□ 0.69
SHISA5-214ENST00000486344 Q7L0L9 218 aa19.38■□□□□ 0.69
SHISA5-214ENST00000486344 TMC7Q7Z402 723 aa19.38■□□□□ 0.69
SHISA5-214ENST00000486344 TMEM130Q8N3G9 435 aa19.38■□□□□ 0.69
SHISA5-214ENST00000486344 MICAL1Q8TDZ2 1067 aa19.38■□□□□ 0.69
SHISA5-214ENST00000486344 HPDLQ96IR7 371 aa19.38■□□□□ 0.69
SHISA5-214ENST00000486344 FAM84AQ96KN4 292 aa19.38■□□□□ 0.69
SHISA5-214ENST00000486344 HERC2P3Q9BVR0 1158 aa19.38■□□□□ 0.69
SHISA5-214ENST00000486344 PLXNA4Q9HCM2 1894 aa19.38■□□□□ 0.69
SHISA5-214ENST00000486344 SAMSN1Q9NSI8 373 aaKnown RBP19.38■□□□□ 0.69
SHISA5-214ENST00000486344 SCN1AP35498 2009 aa19.37■□□□□ 0.69
SHISA5-214ENST00000486344 M0QZQ0 153 aa19.37■□□□□ 0.69
SHISA5-214ENST00000486344 PMM2O15305 246 aa19.37■□□□□ 0.69
SHISA5-214ENST00000486344 N4BP1O75113 896 aaKnown RBP19.37■□□□□ 0.69
SHISA5-214ENST00000486344 CXCL14O95715 111 aa19.37■□□□□ 0.69
SHISA5-214ENST00000486344 STAU1O95793 577 aaKnown RBP19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms