RNA–Protein interactions for RNA: ENST00000486325.1

VTI1BP1-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 1, humanhuman

BASIC

Gene VTI1BP1, Length 700 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP1-201ENST00000486325 ARHGEF19Q8IW93 802 aa14.25□□□□□ -0.13
VTI1BP1-201ENST00000486325 CCDC170Q8IYT3 715 aa14.25□□□□□ -0.13
VTI1BP1-201ENST00000486325 RNF169Q8NCN4 708 aa14.25□□□□□ -0.13
VTI1BP1-201ENST00000486325 DDX27Q96GQ7 796 aaKnown RBP14.25□□□□□ -0.13
VTI1BP1-201ENST00000486325 HPDLQ96IR7 371 aa14.25□□□□□ -0.13
VTI1BP1-201ENST00000486325 ZNF830Q96NB3 372 aaPredicted RBP14.25□□□□□ -0.13
VTI1BP1-201ENST00000486325 PPP1R10Q96QC0 940 aaKnown RBP14.25□□□□□ -0.13
VTI1BP1-201ENST00000486325 PI4K2AQ9BTU6 479 aa14.25□□□□□ -0.13
VTI1BP1-201ENST00000486325 SIX4Q9UIU6 781 aa14.25□□□□□ -0.13
VTI1BP1-201ENST00000486325 LRFN2Q9ULH4 789 aa14.25□□□□□ -0.13
VTI1BP1-201ENST00000486325 ABHD14A-ACY1A0A1B0GW23 586 aa14.24□□□□□ -0.13
VTI1BP1-201ENST00000486325 ANO9A1A5B4 782 aa14.24□□□□□ -0.13
VTI1BP1-201ENST00000486325 FOXN3O00409 490 aaPredicted RBP14.24□□□□□ -0.13
VTI1BP1-201ENST00000486325 OFD1O75665 1012 aa14.24□□□□□ -0.13
VTI1BP1-201ENST00000486325 SERPING1P05155 500 aa14.24□□□□□ -0.13
VTI1BP1-201ENST00000486325 LRPAP1P30533 357 aa14.24□□□□□ -0.13
VTI1BP1-201ENST00000486325 POLR2BP30876 1174 aaKnown RBP14.24□□□□□ -0.13
VTI1BP1-201ENST00000486325 MLH1P40692 756 aa14.24□□□□□ -0.13
VTI1BP1-201ENST00000486325 CCZ1BP86790 482 aa14.24□□□□□ -0.13
VTI1BP1-201ENST00000486325 CCZ1P86791 482 aaPredicted RBP14.24□□□□□ -0.13
VTI1BP1-201ENST00000486325 CUL2Q13617 745 aa14.24□□□□□ -0.13
VTI1BP1-201ENST00000486325 ASIC2Q16515 512 aa14.24□□□□□ -0.13
VTI1BP1-201ENST00000486325 GJB7Q6PEY0 223 aa14.24□□□□□ -0.13
VTI1BP1-201ENST00000486325 DEFB128Q7Z7B8 93 aa14.24□□□□□ -0.13
VTI1BP1-201ENST00000486325 CXorf38Q8TB03 319 aa14.24□□□□□ -0.13
VTI1BP1-201ENST00000486325 URGCPQ8TCY9 931 aa14.24□□□□□ -0.13
VTI1BP1-201ENST00000486325 SHC3Q92529 594 aa14.24□□□□□ -0.13
VTI1BP1-201ENST00000486325 LPPQ93052 612 aa14.24□□□□□ -0.13
VTI1BP1-201ENST00000486325 ZNF560Q96MR9 790 aa14.24□□□□□ -0.13
VTI1BP1-201ENST00000486325 HTATIP2Q9BUP3 242 aa14.24□□□□□ -0.13
VTI1BP1-201ENST00000486325 NIF3L1Q9GZT8 377 aa14.24□□□□□ -0.13
VTI1BP1-201ENST00000486325 XYLT2Q9H1B5 865 aa14.24□□□□□ -0.13
VTI1BP1-201ENST00000486325 CYP3A43Q9HB55 503 aa14.24□□□□□ -0.13
VTI1BP1-201ENST00000486325 PRDM5Q9NQX1 630 aaPredicted RBP14.24□□□□□ -0.13
VTI1BP1-201ENST00000486325 NUB1Q9Y5A7 615 aa14.24□□□□□ -0.13
VTI1BP1-201ENST00000486325 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.24□□□□□ -0.13
VTI1BP1-201ENST00000486325 ANK1P16157 1881 aa14.24□□□□□ -0.13
VTI1BP1-201ENST00000486325 SSU72P8A0A1W2PR75 194 aa14.23□□□□□ -0.13
VTI1BP1-201ENST00000486325 TRIM43BA6NCK2 446 aa14.23□□□□□ -0.13
VTI1BP1-201ENST00000486325 F8VZ95 297 aa14.23□□□□□ -0.13
VTI1BP1-201ENST00000486325 PIRO00625 290 aa14.23□□□□□ -0.13
VTI1BP1-201ENST00000486325 PTGESO14684 152 aa14.23□□□□□ -0.13
VTI1BP1-201ENST00000486325 LRRN2O75325 713 aa14.23□□□□□ -0.13
VTI1BP1-201ENST00000486325 FAM163BP0C2L3 166 aa14.23□□□□□ -0.13
VTI1BP1-201ENST00000486325 KCNA4P22459 653 aa14.23□□□□□ -0.13
VTI1BP1-201ENST00000486325 ANXA13P27216 316 aa14.23□□□□□ -0.13
VTI1BP1-201ENST00000486325 CYLC1P35663 651 aaPredicted RBP14.23□□□□□ -0.13
VTI1BP1-201ENST00000486325 PRKCIP41743 596 aa14.23□□□□□ -0.13
VTI1BP1-201ENST00000486325 KCNJ6P48051 423 aa14.23□□□□□ -0.13
VTI1BP1-201ENST00000486325 KLHL30Q0D2K2 578 aa14.23□□□□□ -0.13
VTI1BP1-201ENST00000486325 GRIK3Q13003 919 aa14.23□□□□□ -0.13
VTI1BP1-201ENST00000486325 WDR72Q3MJ13 1102 aa14.23□□□□□ -0.13
VTI1BP1-201ENST00000486325 GLRA4Q5JXX5 417 aa14.23□□□□□ -0.13
VTI1BP1-201ENST00000486325 C9orf57Q5W0N0 161 aa14.23□□□□□ -0.13
VTI1BP1-201ENST00000486325 WDR59Q6PJI9 974 aa14.23□□□□□ -0.13
VTI1BP1-201ENST00000486325 IRF2BP2Q7Z5L9 587 aa14.23□□□□□ -0.13
VTI1BP1-201ENST00000486325 VPS36Q86VN1 386 aa14.23□□□□□ -0.13
VTI1BP1-201ENST00000486325 FAM71AQ8IYT1 594 aa14.23□□□□□ -0.13
VTI1BP1-201ENST00000486325 ABI1Q8IZP0 508 aa14.23□□□□□ -0.13
VTI1BP1-201ENST00000486325 GSTCDQ8NEC7 633 aa14.23□□□□□ -0.13
VTI1BP1-201ENST00000486325 LINC01599Q8WXQ3 324 aa14.23□□□□□ -0.13
VTI1BP1-201ENST00000486325 C18orf25Q96B23 403 aaPredicted RBP14.23□□□□□ -0.13
VTI1BP1-201ENST00000486325 TRIM43Q96BQ3 446 aaPredicted RBP14.23□□□□□ -0.13
VTI1BP1-201ENST00000486325 FAM84AQ96KN4 292 aa14.23□□□□□ -0.13
VTI1BP1-201ENST00000486325 CCDC42Q96M95 316 aa14.23□□□□□ -0.13
VTI1BP1-201ENST00000486325 ZFP42Q96MM3 310 aa14.23□□□□□ -0.13
VTI1BP1-201ENST00000486325 KREMEN1Q96MU8 473 aa14.23□□□□□ -0.13
VTI1BP1-201ENST00000486325 UROC1Q96N76 676 aa14.23□□□□□ -0.13
VTI1BP1-201ENST00000486325 DNAI2Q9GZS0 605 aa14.23□□□□□ -0.13
VTI1BP1-201ENST00000486325 KCNF1Q9H3M0 494 aa14.23□□□□□ -0.13
VTI1BP1-201ENST00000486325 APOBEC3GQ9HC16 384 aaKnown RBP14.23□□□□□ -0.13
VTI1BP1-201ENST00000486325 ZKSCAN5Q9Y2L8 839 aa14.23□□□□□ -0.13
VTI1BP1-201ENST00000486325 TRIP11Q15643 1979 aa14.22□□□□□ -0.13
VTI1BP1-201ENST00000486325 MEIS3P2A8K0S8 358 aa14.22□□□□□ -0.13
VTI1BP1-201ENST00000486325 GFPT2O94808 682 aa14.22□□□□□ -0.13
VTI1BP1-201ENST00000486325 SCNN1GP51170 649 aa14.22□□□□□ -0.13
VTI1BP1-201ENST00000486325 TNNC1P63316 161 aa14.22□□□□□ -0.13
VTI1BP1-201ENST00000486325 MAPK8IP2Q13387 824 aaPredicted RBP14.22□□□□□ -0.13
VTI1BP1-201ENST00000486325 SV2CQ496J9 727 aa14.22□□□□□ -0.13
VTI1BP1-201ENST00000486325 NOMO2Q5JPE7 1267 aa14.22□□□□□ -0.13
VTI1BP1-201ENST00000486325 SPOPLQ6IQ16 392 aa14.22□□□□□ -0.13
VTI1BP1-201ENST00000486325 NPAS4Q8IUM7 802 aa14.22□□□□□ -0.13
VTI1BP1-201ENST00000486325 TMEM139Q8IV31 216 aa14.22□□□□□ -0.13
VTI1BP1-201ENST00000486325 CXCL16Q9H2A7 254 aa14.22□□□□□ -0.13
VTI1BP1-201ENST00000486325 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.22□□□□□ -0.13
VTI1BP1-201ENST00000486325 MIOSQ9NXC5 875 aa14.22□□□□□ -0.13
VTI1BP1-201ENST00000486325 TUBGCP4Q9UGJ1 667 aa14.22□□□□□ -0.13
VTI1BP1-201ENST00000486325 RALGAPA2Q2PPJ7 1873 aa14.21□□□□□ -0.13
VTI1BP1-201ENST00000486325 CCP110O43303 1012 aa14.21□□□□□ -0.13
VTI1BP1-201ENST00000486325 EVI5O60447 810 aa14.21□□□□□ -0.13
VTI1BP1-201ENST00000486325 IPO7O95373 1038 aaKnown RBP14.21□□□□□ -0.13
VTI1BP1-201ENST00000486325 USP8P40818 1118 aa14.21□□□□□ -0.13
VTI1BP1-201ENST00000486325 TAF6P49848 677 aa14.21□□□□□ -0.13
VTI1BP1-201ENST00000486325 GUCY2FP51841 1108 aa14.21□□□□□ -0.13
VTI1BP1-201ENST00000486325 PTK2Q05397 1052 aa14.21□□□□□ -0.13
VTI1BP1-201ENST00000486325 PPIGQ13427 754 aaKnown RBP eCLIP14.21□□□□□ -0.13
VTI1BP1-201ENST00000486325 TUSC3Q13454 348 aa14.21□□□□□ -0.13
VTI1BP1-201ENST00000486325 TDRD12Q587J7 1177 aaKnown RBP14.21□□□□□ -0.13
VTI1BP1-201ENST00000486325 HGSNATQ68CP4 663 aa14.21□□□□□ -0.13
VTI1BP1-201ENST00000486325 DPH6Q7L8W6 267 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms