RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 LRRC27Q9C0I9 530 aa10.26□□□□□ -0.77
TMEM39A-208ENST00000486159 BHMT2Q9H2M3 363 aa10.26□□□□□ -0.77
TMEM39A-208ENST00000486159 MFSD1Q9H3U5 465 aa10.26□□□□□ -0.77
TMEM39A-208ENST00000486159 PRMT7Q9NVM4 692 aaPredicted RBP10.26□□□□□ -0.77
TMEM39A-208ENST00000486159 MAN1B1Q9UKM7 699 aa10.26□□□□□ -0.77
TMEM39A-208ENST00000486159 CA14Q9ULX7 337 aa10.26□□□□□ -0.77
TMEM39A-208ENST00000486159 DUSP12Q9UNI6 340 aa10.26□□□□□ -0.77
TMEM39A-208ENST00000486159 KIAA1024Q9UPX6 916 aa10.26□□□□□ -0.77
TMEM39A-208ENST00000486159 CLUHO75153 1309 aa10.26□□□□□ -0.77
TMEM39A-208ENST00000486159 NOTCH4Q99466 2003 aa10.26□□□□□ -0.77
TMEM39A-208ENST00000486159 SFI1A8K8P3 1242 aa10.25□□□□□ -0.77
TMEM39A-208ENST00000486159 CCL16O15467 120 aa10.25□□□□□ -0.77
TMEM39A-208ENST00000486159 LRRN2O75325 713 aa10.25□□□□□ -0.77
TMEM39A-208ENST00000486159 MSNP26038 577 aaKnown RBP10.25□□□□□ -0.77
TMEM39A-208ENST00000486159 PPP1R2P41236 205 aa10.25□□□□□ -0.77
TMEM39A-208ENST00000486159 STAT6P42226 847 aa10.25□□□□□ -0.77
TMEM39A-208ENST00000486159 BRCC3P46736 316 aa10.25□□□□□ -0.77
TMEM39A-208ENST00000486159 CLCNKBP51801 687 aa10.25□□□□□ -0.77
TMEM39A-208ENST00000486159 OSTNP61366 133 aa10.25□□□□□ -0.77
TMEM39A-208ENST00000486159 AMPD3Q01432 767 aa10.25□□□□□ -0.77
TMEM39A-208ENST00000486159 SOX4Q06945 474 aaPredicted RBP10.25□□□□□ -0.77
TMEM39A-208ENST00000486159 DPYDQ12882 1025 aa10.25□□□□□ -0.77
TMEM39A-208ENST00000486159 PCBP1Q15365 356 aaKnown RBP eCLIP10.25□□□□□ -0.77
TMEM39A-208ENST00000486159 TMEM132AQ24JP5 1023 aa10.25□□□□□ -0.77
TMEM39A-208ENST00000486159 USP49Q70CQ1 688 aa10.25□□□□□ -0.77
TMEM39A-208ENST00000486159 GRASPQ7Z6J2 395 aaPredicted RBP10.25□□□□□ -0.77
TMEM39A-208ENST00000486159 ZBTB8OSQ8IWT0 167 aa10.25□□□□□ -0.77
TMEM39A-208ENST00000486159 DAW1Q8N136 415 aa10.25□□□□□ -0.77
TMEM39A-208ENST00000486159 KCTD17Q8N5Z5 321 aa10.25□□□□□ -0.77
TMEM39A-208ENST00000486159 AOPEPQ8N6M6 819 aa10.25□□□□□ -0.77
TMEM39A-208ENST00000486159 PDILTQ8N807 584 aa10.25□□□□□ -0.77
TMEM39A-208ENST00000486159 IGSF22Q8N9C0 903 aa10.25□□□□□ -0.77
TMEM39A-208ENST00000486159 MCPH1Q8NEM0 835 aa10.25□□□□□ -0.77
TMEM39A-208ENST00000486159 CCDC47Q96A33 483 aaKnown RBP10.25□□□□□ -0.77
TMEM39A-208ENST00000486159 CALML4Q96GE6 196 aa10.25□□□□□ -0.77
TMEM39A-208ENST00000486159 ZBTB45Q96K62 511 aaPredicted RBP10.25□□□□□ -0.77
TMEM39A-208ENST00000486159 MMTAG2Q9BU76 263 aaKnown RBP10.25□□□□□ -0.77
TMEM39A-208ENST00000486159 RUSC1Q9BVN2 902 aa10.25□□□□□ -0.77
TMEM39A-208ENST00000486159 PRKD2Q9BZL6 878 aa10.25□□□□□ -0.77
TMEM39A-208ENST00000486159 PIDD1Q9HB75 910 aa10.25□□□□□ -0.77
TMEM39A-208ENST00000486159 HCFC1R1Q9NWW0 138 aa10.25□□□□□ -0.77
TMEM39A-208ENST00000486159 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.25□□□□□ -0.77
TMEM39A-208ENST00000486159 STK17AQ9UEE5 414 aa10.25□□□□□ -0.77
TMEM39A-208ENST00000486159 ZKSCAN5Q9Y2L8 839 aa10.25□□□□□ -0.77
TMEM39A-208ENST00000486159 DMDP11532 3685 aa10.25□□□□□ -0.77
TMEM39A-208ENST00000486159 VPS13AQ96RL7 3174 aa10.24□□□□□ -0.77
TMEM39A-208ENST00000486159 CARNS1A5YM72 827 aa10.24□□□□□ -0.77
TMEM39A-208ENST00000486159 BIN1O00499 593 aa10.24□□□□□ -0.77
TMEM39A-208ENST00000486159 ACKR2O00590 384 aa10.24□□□□□ -0.77
TMEM39A-208ENST00000486159 NRG2O14511 850 aaPredicted RBP10.24□□□□□ -0.77
TMEM39A-208ENST00000486159 N4BP3O15049 544 aa10.24□□□□□ -0.77
TMEM39A-208ENST00000486159 CBFA2T2O43439 604 aa10.24□□□□□ -0.77
TMEM39A-208ENST00000486159 ZMYND10O75800 440 aa10.24□□□□□ -0.77
TMEM39A-208ENST00000486159 THP07101 528 aa10.24□□□□□ -0.77
TMEM39A-208ENST00000486159 RAD51AP2Q09MP3 1159 aa10.24□□□□□ -0.77
TMEM39A-208ENST00000486159 COL9A2Q14055 689 aaPredicted RBP10.24□□□□□ -0.77
TMEM39A-208ENST00000486159 KCNB1Q14721 858 aa10.24□□□□□ -0.77
TMEM39A-208ENST00000486159 PSMD5Q16401 504 aa10.24□□□□□ -0.77
TMEM39A-208ENST00000486159 MAPK6Q16659 721 aa10.24□□□□□ -0.77
TMEM39A-208ENST00000486159 SEZ6Q53EL9 994 aa10.24□□□□□ -0.77
TMEM39A-208ENST00000486159 PARM1Q6UWI2 310 aa10.24□□□□□ -0.77
TMEM39A-208ENST00000486159 FRMD5Q7Z6J6 570 aa10.24□□□□□ -0.77
TMEM39A-208ENST00000486159 HACE1Q8IYU2 909 aa10.24□□□□□ -0.77
TMEM39A-208ENST00000486159 RASSF8Q8NHQ8 419 aa10.24□□□□□ -0.77
TMEM39A-208ENST00000486159 DEPTORQ8TB45 409 aa10.24□□□□□ -0.77
TMEM39A-208ENST00000486159 ITFG1Q8TB96 612 aa10.24□□□□□ -0.77
TMEM39A-208ENST00000486159 ENOX1Q8TC92 643 aaKnown RBP10.24□□□□□ -0.77
TMEM39A-208ENST00000486159 GPR152Q8TDT2 470 aa10.24□□□□□ -0.77
TMEM39A-208ENST00000486159 PRIMPOLQ96LW4 560 aa10.24□□□□□ -0.77
TMEM39A-208ENST00000486159 ZMAT2Q96NC0 199 aaKnown RBP10.24□□□□□ -0.77
TMEM39A-208ENST00000486159 PLIN2Q99541 437 aa10.24□□□□□ -0.77
TMEM39A-208ENST00000486159 PRRX2Q99811 253 aa10.24□□□□□ -0.77
TMEM39A-208ENST00000486159 FNIP2Q9P278 1114 aa10.24□□□□□ -0.77
TMEM39A-208ENST00000486159 IMPACTQ9P2X3 320 aa10.24□□□□□ -0.77
TMEM39A-208ENST00000486159 EPS15L1Q9UBC2 864 aa10.24□□□□□ -0.77
TMEM39A-208ENST00000486159 LRWD1Q9UFC0 647 aa10.24□□□□□ -0.77
TMEM39A-208ENST00000486159 FBXL21Q9UKT6 434 aa10.24□□□□□ -0.77
TMEM39A-208ENST00000486159 SSX2IPQ9Y2D8 614 aa10.24□□□□□ -0.77
TMEM39A-208ENST00000486159 A0A087X0B3 334 aa10.23□□□□□ -0.77
TMEM39A-208ENST00000486159 CCDC169A6NNP5 214 aa10.23□□□□□ -0.77
TMEM39A-208ENST00000486159 HIP1RO75146 1068 aa10.23□□□□□ -0.77
TMEM39A-208ENST00000486159 PAPLNO95428 1278 aa10.23□□□□□ -0.77
TMEM39A-208ENST00000486159 DCNP07585 359 aaKnown RBP10.23□□□□□ -0.77
TMEM39A-208ENST00000486159 LAMP2P13473 410 aa10.23□□□□□ -0.77
TMEM39A-208ENST00000486159 AOC1P19801 751 aa10.23□□□□□ -0.77
TMEM39A-208ENST00000486159 TKTP29401 623 aaKnown RBP10.23□□□□□ -0.77
TMEM39A-208ENST00000486159 OR1D2P34982 312 aa10.23□□□□□ -0.77
TMEM39A-208ENST00000486159 NAMPTP43490 491 aa10.23□□□□□ -0.77
TMEM39A-208ENST00000486159 NPTX2P47972 431 aa10.23□□□□□ -0.77
TMEM39A-208ENST00000486159 CLCN5P51795 746 aa10.23□□□□□ -0.77
TMEM39A-208ENST00000486159 PEX3P56589 373 aa10.23□□□□□ -0.77
TMEM39A-208ENST00000486159 MAPK7Q13164 816 aa10.23□□□□□ -0.77
TMEM39A-208ENST00000486159 NCAPHQ15003 741 aa10.23□□□□□ -0.77
TMEM39A-208ENST00000486159 ATF7IP2Q5U623 682 aa10.23□□□□□ -0.77
TMEM39A-208ENST00000486159 SNX29Q8TEQ0 813 aa10.23□□□□□ -0.77
TMEM39A-208ENST00000486159 FGF14Q92915 247 aa10.23□□□□□ -0.77
TMEM39A-208ENST00000486159 C18orf25Q96B23 403 aaPredicted RBP10.23□□□□□ -0.77
TMEM39A-208ENST00000486159 PPP1R10Q96QC0 940 aaKnown RBP10.23□□□□□ -0.77
TMEM39A-208ENST00000486159 TTPALQ9BTX7 342 aa10.23□□□□□ -0.77
TMEM39A-208ENST00000486159 TARS2Q9BW92 718 aaKnown RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms