RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 ZBTB6Q15916 424 aa19.17■□□□□ 0.66
COL6A1-204ENST00000486023 ZDHHC14Q8IZN3 488 aa19.17■□□□□ 0.66
COL6A1-204ENST00000486023 APPL2Q8NEU8 664 aa19.17■□□□□ 0.66
COL6A1-204ENST00000486023 BEST2Q8NFU1 509 aa19.17■□□□□ 0.66
COL6A1-204ENST00000486023 HVCN1Q96D96 273 aa19.17■□□□□ 0.66
COL6A1-204ENST00000486023 FAM213AQ9BRX8 229 aa19.17■□□□□ 0.66
COL6A1-204ENST00000486023 BLZF1Q9H2G9 400 aa19.17■□□□□ 0.66
COL6A1-204ENST00000486023 TNMDQ9H2S6 317 aa19.17■□□□□ 0.66
COL6A1-204ENST00000486023 PCIF1Q9H4Z3 704 aa19.17■□□□□ 0.66
COL6A1-204ENST00000486023 SORCS3Q9UPU3 1222 aa19.17■□□□□ 0.66
COL6A1-204ENST00000486023 CLUHO75153 1309 aa19.17■□□□□ 0.66
COL6A1-204ENST00000486023 PPEF2O14830 753 aa19.16■□□□□ 0.66
COL6A1-204ENST00000486023 SYN3O14994 580 aa19.16■□□□□ 0.66
COL6A1-204ENST00000486023 PPP1R37O75864 691 aa19.16■□□□□ 0.66
COL6A1-204ENST00000486023 CYP3A5P20815 502 aa19.16■□□□□ 0.66
COL6A1-204ENST00000486023 ADSSP30520 456 aa19.16■□□□□ 0.66
COL6A1-204ENST00000486023 AFMP43652 599 aa19.16■□□□□ 0.66
COL6A1-204ENST00000486023 ROR1Q01973 937 aa19.16■□□□□ 0.66
COL6A1-204ENST00000486023 MTMR3Q13615 1198 aa19.16■□□□□ 0.66
COL6A1-204ENST00000486023 POSTNQ15063 836 aa19.16■□□□□ 0.66
COL6A1-204ENST00000486023 E2F4Q16254 413 aa19.16■□□□□ 0.66
COL6A1-204ENST00000486023 CYP26C1Q6V0L0 522 aa19.16■□□□□ 0.66
COL6A1-204ENST00000486023 CD302Q8IX05 232 aa19.16■□□□□ 0.66
COL6A1-204ENST00000486023 SUSD3Q96L08 255 aa19.16■□□□□ 0.66
COL6A1-204ENST00000486023 STRA6Q9BX79 667 aa19.16■□□□□ 0.66
COL6A1-204ENST00000486023 PRRG1O14668 218 aa19.15■□□□□ 0.66
COL6A1-204ENST00000486023 N4BP1O75113 896 aaKnown RBP19.15■□□□□ 0.66
COL6A1-204ENST00000486023 C1RP00736 705 aa19.15■□□□□ 0.66
COL6A1-204ENST00000486023 SIGLEC14Q08ET2 396 aa19.15■□□□□ 0.66
COL6A1-204ENST00000486023 SPATA1Q5VX52 437 aa19.15■□□□□ 0.66
COL6A1-204ENST00000486023 ATL3Q6DD88 541 aa19.15■□□□□ 0.66
COL6A1-204ENST00000486023 ZNF280DQ6N043 979 aa19.15■□□□□ 0.66
COL6A1-204ENST00000486023 USP37Q86T82 979 aa19.15■□□□□ 0.66
COL6A1-204ENST00000486023 GLIS3Q8NEA6 775 aa19.15■□□□□ 0.66
COL6A1-204ENST00000486023 ZSWIM2Q8NEG5 633 aa19.15■□□□□ 0.66
COL6A1-204ENST00000486023 RSAD2Q8WXG1 361 aa19.15■□□□□ 0.66
COL6A1-204ENST00000486023 MFSD14AQ96MC6 490 aa19.15■□□□□ 0.66
COL6A1-204ENST00000486023 MYADMQ96S97 322 aa19.15■□□□□ 0.66
COL6A1-204ENST00000486023 TRIM9Q9C026 710 aa19.15■□□□□ 0.66
COL6A1-204ENST00000486023 CUEDC2Q9H467 287 aa19.15■□□□□ 0.66
COL6A1-204ENST00000486023 CYP4F11Q9HBI6 524 aa19.15■□□□□ 0.66
COL6A1-204ENST00000486023 OLFML3Q9NRN5 406 aa19.15■□□□□ 0.66
COL6A1-204ENST00000486023 KBTBD4Q9NVX7 518 aa19.15■□□□□ 0.66
COL6A1-204ENST00000486023 FBXL5Q9UKA1 691 aa19.15■□□□□ 0.66
COL6A1-204ENST00000486023 RCOR1Q9UKL0 485 aa19.15■□□□□ 0.66
COL6A1-204ENST00000486023 PCDHB8Q9UN66 801 aa19.15■□□□□ 0.66
COL6A1-204ENST00000486023 STYXL1Q9Y6J8 313 aa19.15■□□□□ 0.66
COL6A1-204ENST00000486023 PLXNA3P51805 1871 aa19.14■□□□□ 0.65
COL6A1-204ENST00000486023 FRMD3A2A2Y4 597 aa19.14■□□□□ 0.65
COL6A1-204ENST00000486023 WDR27A2RRH5 827 aa19.14■□□□□ 0.65
COL6A1-204ENST00000486023 XYLBO75191 536 aa19.14■□□□□ 0.65
COL6A1-204ENST00000486023 CPB1P15086 417 aa19.14■□□□□ 0.65
COL6A1-204ENST00000486023 FSHRP23945 695 aa19.14■□□□□ 0.65
COL6A1-204ENST00000486023 LRPAP1P30533 357 aa19.14■□□□□ 0.65
COL6A1-204ENST00000486023 YWHAHQ04917 246 aaPredicted RBP19.14■□□□□ 0.65
COL6A1-204ENST00000486023 RESP18Q5W5W9 173 aa19.14■□□□□ 0.65
COL6A1-204ENST00000486023 ZNF461Q8TAF7 563 aa19.14■□□□□ 0.65
COL6A1-204ENST00000486023 TMEM206Q9H813 350 aa19.14■□□□□ 0.65
COL6A1-204ENST00000486023 KCNK12Q9HB15 430 aa19.14■□□□□ 0.65
COL6A1-204ENST00000486023 DPP3Q9NY33 737 aa19.14■□□□□ 0.65
COL6A1-204ENST00000486023 TRIP11Q15643 1979 aa19.13■□□□□ 0.65
COL6A1-204ENST00000486023 LRG1P02750 347 aa19.13■□□□□ 0.65
COL6A1-204ENST00000486023 HNRNPA1P09651 372 aaKnown RBP eCLIP19.13■□□□□ 0.65
COL6A1-204ENST00000486023 CDR1P51861 262 aa19.13■□□□□ 0.65
COL6A1-204ENST00000486023 TFAMQ00059 246 aaKnown RBP19.13■□□□□ 0.65
COL6A1-204ENST00000486023 ALCAMQ13740 583 aa19.13■□□□□ 0.65
COL6A1-204ENST00000486023 C9orf57Q5W0N0 161 aa19.13■□□□□ 0.65
COL6A1-204ENST00000486023 ARMCX5Q6P1M9 558 aa19.13■□□□□ 0.65
COL6A1-204ENST00000486023 CRELD2Q6UXH1 353 aaPredicted RBP19.13■□□□□ 0.65
COL6A1-204ENST00000486023 STXBP4Q6ZWJ1 553 aa19.13■□□□□ 0.65
COL6A1-204ENST00000486023 GRAMD1CQ8IYS0 662 aa19.13■□□□□ 0.65
COL6A1-204ENST00000486023 CEP57L1Q8IYX8 460 aa19.13■□□□□ 0.65
COL6A1-204ENST00000486023 SPATA32Q96LK8 384 aa19.13■□□□□ 0.65
COL6A1-204ENST00000486023 CBWD1Q9BRT8 395 aa19.13■□□□□ 0.65
COL6A1-204ENST00000486023 ASB7Q9H672 318 aa19.13■□□□□ 0.65
COL6A1-204ENST00000486023 HCFC1R1Q9NWW0 138 aa19.13■□□□□ 0.65
COL6A1-204ENST00000486023 SERTAD1Q9UHV2 236 aa19.13■□□□□ 0.65
COL6A1-204ENST00000486023 KCNH3Q9ULD8 1083 aa19.13■□□□□ 0.65
COL6A1-204ENST00000486023 ZDHHC9Q9Y397 364 aa19.13■□□□□ 0.65
COL6A1-204ENST00000486023 ADRB2P07550 413 aa19.12■□□□□ 0.65
COL6A1-204ENST00000486023 OR4Q2P0C623 313 aa19.12■□□□□ 0.65
COL6A1-204ENST00000486023 MRPL58Q14197 206 aaKnown RBP19.12■□□□□ 0.65
COL6A1-204ENST00000486023 UVSSAQ2YD98 709 aa19.12■□□□□ 0.65
COL6A1-204ENST00000486023 SLC8B1Q6J4K2 584 aa19.12■□□□□ 0.65
COL6A1-204ENST00000486023 SUGP1Q8IWZ8 645 aaKnown RBP19.12■□□□□ 0.65
COL6A1-204ENST00000486023 UBALD2Q8IYN6 164 aa19.12■□□□□ 0.65
COL6A1-204ENST00000486023 SENP8Q96LD8 212 aa19.12■□□□□ 0.65
COL6A1-204ENST00000486023 PGLYRP2Q96PD5 576 aa19.12■□□□□ 0.65
COL6A1-204ENST00000486023 TSPAN18Q96SJ8 248 aa19.12■□□□□ 0.65
COL6A1-204ENST00000486023 RBAKQ9NYW8 714 aaPredicted RBP19.12■□□□□ 0.65
COL6A1-204ENST00000486023 A0A1B0GVL5 298 aa19.11■□□□□ 0.65
COL6A1-204ENST00000486023 M0QZQ0 153 aa19.11■□□□□ 0.65
COL6A1-204ENST00000486023 SPTLC1O15269 473 aa19.11■□□□□ 0.65
COL6A1-204ENST00000486023 TBC1D4O60343 1298 aa19.11■□□□□ 0.65
COL6A1-204ENST00000486023 IL18RAPO95256 599 aa19.11■□□□□ 0.65
COL6A1-204ENST00000486023 SEC24AO95486 1093 aa19.11■□□□□ 0.65
COL6A1-204ENST00000486023 PDGFBP01127 241 aaPredicted RBP19.11■□□□□ 0.65
COL6A1-204ENST00000486023 GARTP22102 1010 aa19.11■□□□□ 0.65
COL6A1-204ENST00000486023 LILRA4P59901 499 aa19.11■□□□□ 0.65
COL6A1-204ENST00000486023 KRT85P78386 507 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms