RNA–Protein interactions for RNA: ENST00000485705.5

RPUSD3-217, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 3

Gene RPUSD3, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-217ENST00000485705 ANO6Q4KMQ2 910 aa16.73■□□□□ 0.27
RPUSD3-217ENST00000485705 CT47A1Q5JQC4 288 aaPredicted RBP16.73■□□□□ 0.27
RPUSD3-217ENST00000485705 FUT10Q6P4F1 479 aa16.73■□□□□ 0.27
RPUSD3-217ENST00000485705 TRAPPC11Q7Z392 1133 aa16.73■□□□□ 0.27
RPUSD3-217ENST00000485705 IRF2BP1Q8IU81 584 aa16.73■□□□□ 0.27
RPUSD3-217ENST00000485705 B3GALT6Q96L58 329 aa16.73■□□□□ 0.27
RPUSD3-217ENST00000485705 GUCD1Q96NT3 240 aa16.73■□□□□ 0.27
RPUSD3-217ENST00000485705 ADAM28Q9UKQ2 775 aa16.73■□□□□ 0.27
RPUSD3-217ENST00000485705 PCDHGC5Q9Y5F6 944 aa16.73■□□□□ 0.27
RPUSD3-217ENST00000485705 BRWD1Q9NSI6 2320 aa16.72■□□□□ 0.27
RPUSD3-217ENST00000485705 CARNS1A5YM72 827 aa16.72■□□□□ 0.27
RPUSD3-217ENST00000485705 SPTLC1O15269 473 aa16.72■□□□□ 0.27
RPUSD3-217ENST00000485705 TNNC2P02585 160 aa16.72■□□□□ 0.27
RPUSD3-217ENST00000485705 C4BPAP04003 597 aaKnown RBP16.72■□□□□ 0.27
RPUSD3-217ENST00000485705 CCDC192P0DO97 292 aa16.72■□□□□ 0.27
RPUSD3-217ENST00000485705 IRS1P35568 1242 aa16.72■□□□□ 0.27
RPUSD3-217ENST00000485705 MCCD1P59942 119 aaPredicted RBP16.72■□□□□ 0.27
RPUSD3-217ENST00000485705 TPD52L1Q16890 204 aaPredicted RBP16.72■□□□□ 0.27
RPUSD3-217ENST00000485705 CCDC40Q4G0X9 1142 aa16.72■□□□□ 0.27
RPUSD3-217ENST00000485705 TIGD5Q53EQ6 642 aa16.72■□□□□ 0.27
RPUSD3-217ENST00000485705 TDRD10Q5VZ19 366 aaKnown RBP16.72■□□□□ 0.27
RPUSD3-217ENST00000485705 DDX53Q86TM3 631 aaKnown RBP16.72■□□□□ 0.27
RPUSD3-217ENST00000485705 RNF168Q8IYW5 571 aaPredicted RBP16.72■□□□□ 0.27
RPUSD3-217ENST00000485705 VPS52Q8N1B4 723 aa16.72■□□□□ 0.27
RPUSD3-217ENST00000485705 MYLIPQ8WY64 445 aa16.72■□□□□ 0.27
RPUSD3-217ENST00000485705 CDX2Q99626 313 aaPredicted RBP16.72■□□□□ 0.27
RPUSD3-217ENST00000485705 MMRN2Q9H8L6 949 aa16.72■□□□□ 0.27
RPUSD3-217ENST00000485705 MTMR10Q9NXD2 777 aa16.72■□□□□ 0.27
RPUSD3-217ENST00000485705 ARMCX3Q9UH62 379 aaPredicted RBP16.72■□□□□ 0.27
RPUSD3-217ENST00000485705 AGAP1Q9UPQ3 857 aa16.72■□□□□ 0.27
RPUSD3-217ENST00000485705 CST3P01034 146 aaPredicted RBP16.71■□□□□ 0.27
RPUSD3-217ENST00000485705 KRT19P08727 400 aa16.71■□□□□ 0.27
RPUSD3-217ENST00000485705 GCLMP48507 274 aa16.71■□□□□ 0.27
RPUSD3-217ENST00000485705 UBE3AQ05086 875 aa16.71■□□□□ 0.27
RPUSD3-217ENST00000485705 HSP90AA4PQ58FG1 418 aa16.71■□□□□ 0.27
RPUSD3-217ENST00000485705 DCAF17Q5H9S7 520 aaPredicted RBP16.71■□□□□ 0.27
RPUSD3-217ENST00000485705 SV2AQ7L0J3 742 aa16.71■□□□□ 0.27
RPUSD3-217ENST00000485705 FRMD5Q7Z6J6 570 aa16.71■□□□□ 0.27
RPUSD3-217ENST00000485705 ENOX1Q8TC92 643 aaKnown RBP16.71■□□□□ 0.27
RPUSD3-217ENST00000485705 AUTS2Q8WXX7 1259 aa16.71■□□□□ 0.27
RPUSD3-217ENST00000485705 ELMO3Q96BJ8 720 aa16.71■□□□□ 0.27
RPUSD3-217ENST00000485705 SAMSN1Q9NSI8 373 aaKnown RBP16.71■□□□□ 0.27
RPUSD3-217ENST00000485705 PUF60Q9UHX1 559 aaKnown RBP16.71■□□□□ 0.27
RPUSD3-217ENST00000485705 ITGA11Q9UKX5 1188 aa16.71■□□□□ 0.27
RPUSD3-217ENST00000485705 LZTS1Q9Y250 596 aa16.71■□□□□ 0.27
RPUSD3-217ENST00000485705 NUB1Q9Y5A7 615 aa16.71■□□□□ 0.27
RPUSD3-217ENST00000485705 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.71■□□□□ 0.27
RPUSD3-217ENST00000485705 IKBKBO14920 756 aa16.7■□□□□ 0.26
RPUSD3-217ENST00000485705 VNN1O95497 513 aa16.7■□□□□ 0.26
RPUSD3-217ENST00000485705 FGFR1OPO95684 399 aaKnown RBP16.7■□□□□ 0.26
RPUSD3-217ENST00000485705 LILRA4P59901 499 aa16.7■□□□□ 0.26
RPUSD3-217ENST00000485705 ENPEPQ07075 957 aa16.7■□□□□ 0.26
RPUSD3-217ENST00000485705 BIRC3Q13489 604 aa16.7■□□□□ 0.26
RPUSD3-217ENST00000485705 FAM171A1Q5VUB5 890 aa16.7■□□□□ 0.26
RPUSD3-217ENST00000485705 TCERG1LQ5VWI1 586 aa16.7■□□□□ 0.26
RPUSD3-217ENST00000485705 C15orf39Q6ZRI6 1047 aa16.7■□□□□ 0.26
RPUSD3-217ENST00000485705 CREBRFQ8IUR6 639 aa16.7■□□□□ 0.26
RPUSD3-217ENST00000485705 CNOT6LQ96LI5 555 aaKnown RBP16.7■□□□□ 0.26
RPUSD3-217ENST00000485705 HERC2P3Q9BVR0 1158 aa16.7■□□□□ 0.26
RPUSD3-217ENST00000485705 ZBP1Q9H171 429 aa16.7■□□□□ 0.26
RPUSD3-217ENST00000485705 METTL14Q9HCE5 456 aaKnown RBP16.7■□□□□ 0.26
RPUSD3-217ENST00000485705 TLR9Q9NR96 1032 aa16.7■□□□□ 0.26
RPUSD3-217ENST00000485705 NFE2L3Q9Y4A8 694 aa16.7■□□□□ 0.26
RPUSD3-217ENST00000485705 REV3LO60673 3130 aa16.7■□□□□ 0.26
RPUSD3-217ENST00000485705 SF3B1O75533 1304 aaKnown RBP eCLIP16.7■□□□□ 0.261e-6■■■■■ 66.8
RPUSD3-217ENST00000485705 FSCN2O14926 492 aa16.69■□□□□ 0.26
RPUSD3-217ENST00000485705 PHACTR2O75167 634 aa16.69■□□□□ 0.26
RPUSD3-217ENST00000485705 GNA14O95837 355 aa16.69■□□□□ 0.26
RPUSD3-217ENST00000485705 SOD2P04179 222 aa16.69■□□□□ 0.26
RPUSD3-217ENST00000485705 IGFBP4P22692 258 aa16.69■□□□□ 0.26
RPUSD3-217ENST00000485705 TKTP29401 623 aaKnown RBP16.69■□□□□ 0.26
RPUSD3-217ENST00000485705 AARSP49588 968 aaKnown RBP eCLIP16.69■□□□□ 0.26
RPUSD3-217ENST00000485705 AP3M2P53677 418 aa16.69■□□□□ 0.26
RPUSD3-217ENST00000485705 MARSP56192 900 aaKnown RBP16.69■□□□□ 0.26
RPUSD3-217ENST00000485705 RBP5P82980 135 aa16.69■□□□□ 0.26
RPUSD3-217ENST00000485705 NCAPHQ15003 741 aa16.69■□□□□ 0.26
RPUSD3-217ENST00000485705 ZACNQ401N2 412 aa16.69■□□□□ 0.26
RPUSD3-217ENST00000485705 PLPP4Q5VZY2 271 aa16.69■□□□□ 0.26
RPUSD3-217ENST00000485705 USP37Q86T82 979 aa16.69■□□□□ 0.26
RPUSD3-217ENST00000485705 CEP57Q86XR8 500 aa16.69■□□□□ 0.26
RPUSD3-217ENST00000485705 TRIM59Q8IWR1 403 aa16.69■□□□□ 0.26
RPUSD3-217ENST00000485705 MICAL1Q8TDZ2 1067 aa16.69■□□□□ 0.26
RPUSD3-217ENST00000485705 SLC35C1Q96A29 364 aa16.69■□□□□ 0.26
RPUSD3-217ENST00000485705 MRPL38Q96DV4 380 aaKnown RBP16.69■□□□□ 0.26
RPUSD3-217ENST00000485705 SUSD3Q96L08 255 aa16.69■□□□□ 0.26
RPUSD3-217ENST00000485705 SENP8Q96LD8 212 aa16.69■□□□□ 0.26
RPUSD3-217ENST00000485705 TCF25Q9BQ70 676 aa16.69■□□□□ 0.26
RPUSD3-217ENST00000485705 LMAN2LQ9H0V9 348 aa16.69■□□□□ 0.26
RPUSD3-217ENST00000485705 THAP9Q9H5L6 903 aa16.69■□□□□ 0.26
RPUSD3-217ENST00000485705 EYSQ5T1H1 3165 aa16.68■□□□□ 0.26
RPUSD3-217ENST00000485705 C2CD2LO14523 706 aa16.68■□□□□ 0.26
RPUSD3-217ENST00000485705 LRRN2O75325 713 aa16.68■□□□□ 0.26
RPUSD3-217ENST00000485705 CXCL14O95715 111 aa16.68■□□□□ 0.26
RPUSD3-217ENST00000485705 CTSAP10619 480 aa16.68■□□□□ 0.26
RPUSD3-217ENST00000485705 TAF6P49848 677 aa16.68■□□□□ 0.26
RPUSD3-217ENST00000485705 MYL6P60660 151 aa16.68■□□□□ 0.26
RPUSD3-217ENST00000485705 CBWD6Q4V339 395 aa16.68■□□□□ 0.26
RPUSD3-217ENST00000485705 CBWD3Q5JTY5 395 aa16.68■□□□□ 0.26
RPUSD3-217ENST00000485705 RTP2Q5QGT7 225 aa16.68■□□□□ 0.26
RPUSD3-217ENST00000485705 CBWD5Q5RIA9 395 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms