RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 UPP1Q16831 310 aa18.93■□□□□ 0.62
CHMP3-207ENST00000485465 EXOC3L4Q17RC7 722 aa18.93■□□□□ 0.62
CHMP3-207ENST00000485465 LRRC52Q8N7C0 313 aa18.93■□□□□ 0.62
CHMP3-207ENST00000485465 LMO3Q8TAP4 145 aa18.93■□□□□ 0.62
CHMP3-207ENST00000485465 SP7Q8TDD2 431 aaPredicted RBP18.93■□□□□ 0.62
CHMP3-207ENST00000485465 ERGIC2Q96RQ1 377 aa18.93■□□□□ 0.62
CHMP3-207ENST00000485465 PAAF1Q9BRP4 392 aa18.93■□□□□ 0.62
CHMP3-207ENST00000485465 TMEM175Q9BSA9 504 aa18.93■□□□□ 0.62
CHMP3-207ENST00000485465 INTS2Q9H0H0 1204 aaKnown RBP18.93■□□□□ 0.62
CHMP3-207ENST00000485465 GCNT4Q9P109 453 aa18.93■□□□□ 0.62
CHMP3-207ENST00000485465 MRPL42Q9Y6G3 142 aaKnown RBP18.93■□□□□ 0.62
CHMP3-207ENST00000485465 GRXCR1A8MXD5 290 aa18.92■□□□□ 0.62
CHMP3-207ENST00000485465 ZC3H11AO75152 810 aaKnown RBP eCLIP18.92■□□□□ 0.62
CHMP3-207ENST00000485465 LRRN2O75325 713 aa18.92■□□□□ 0.62
CHMP3-207ENST00000485465 ALDH2P05091 517 aa18.92■□□□□ 0.62
CHMP3-207ENST00000485465 PON1P27169 355 aa18.92■□□□□ 0.62
CHMP3-207ENST00000485465 ATICP31939 592 aa18.92■□□□□ 0.62
CHMP3-207ENST00000485465 OR1G1P47890 313 aa18.92■□□□□ 0.62
CHMP3-207ENST00000485465 SLC11A1P49279 550 aa18.92■□□□□ 0.62
CHMP3-207ENST00000485465 RABGGTBP53611 331 aa18.92■□□□□ 0.62
CHMP3-207ENST00000485465 SGSM1Q2NKQ1 1148 aa18.92■□□□□ 0.62
CHMP3-207ENST00000485465 FAM109BQ6ICB4 259 aaPredicted RBP18.92■□□□□ 0.62
CHMP3-207ENST00000485465 DCLRE1AQ6PJP8 1040 aa18.92■□□□□ 0.62
CHMP3-207ENST00000485465 FIBCD1Q8N539 461 aa18.92■□□□□ 0.62
CHMP3-207ENST00000485465 RABGGTAQ92696 567 aa18.92■□□□□ 0.62
CHMP3-207ENST00000485465 HPDLQ96IR7 371 aa18.92■□□□□ 0.62
CHMP3-207ENST00000485465 XYLT2Q9H1B5 865 aa18.92■□□□□ 0.62
CHMP3-207ENST00000485465 TDRD15B5MCY1 1934 aaKnown RBP18.92■□□□□ 0.62
CHMP3-207ENST00000485465 A0A1W2PQC6 194 aa18.91■□□□□ 0.62
CHMP3-207ENST00000485465 NRP1O14786 923 aa18.91■□□□□ 0.62
CHMP3-207ENST00000485465 STAU1O95793 577 aaKnown RBP18.91■□□□□ 0.62
CHMP3-207ENST00000485465 ASS1P00966 412 aaKnown RBP18.91■□□□□ 0.62
CHMP3-207ENST00000485465 GALTP07902 379 aa18.91■□□□□ 0.62
CHMP3-207ENST00000485465 SLC9A1P19634 815 aa18.91■□□□□ 0.62
CHMP3-207ENST00000485465 PNPLA4P41247 253 aa18.91■□□□□ 0.62
CHMP3-207ENST00000485465 MRE11P49959 708 aa18.91■□□□□ 0.62
CHMP3-207ENST00000485465 ZNF75DP51815 510 aa18.91■□□□□ 0.62
CHMP3-207ENST00000485465 BCAR1P56945 870 aa18.91■□□□□ 0.62
CHMP3-207ENST00000485465 MYO1EQ12965 1108 aa18.91■□□□□ 0.62
CHMP3-207ENST00000485465 SYCP1Q15431 976 aa18.91■□□□□ 0.62
CHMP3-207ENST00000485465 WDR44Q5JSH3 913 aa18.91■□□□□ 0.62
CHMP3-207ENST00000485465 SPOUT1Q5T280 376 aaKnown RBP18.91■□□□□ 0.62
CHMP3-207ENST00000485465 TDHQ8IZJ6 230 aa18.91■□□□□ 0.62
CHMP3-207ENST00000485465 CCDC150Q8NCX0 1101 aa18.91■□□□□ 0.62
CHMP3-207ENST00000485465 TAF4BQ92750 862 aa18.91■□□□□ 0.62
CHMP3-207ENST00000485465 ZNF560Q96MR9 790 aa18.91■□□□□ 0.62
CHMP3-207ENST00000485465 PI4K2AQ9BTU6 479 aa18.91■□□□□ 0.62
CHMP3-207ENST00000485465 PRO3102Q9H379 93 aa18.91■□□□□ 0.62
CHMP3-207ENST00000485465 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.91■□□□□ 0.62
CHMP3-207ENST00000485465 SIK3Q9Y2K2 1263 aa18.91■□□□□ 0.62
CHMP3-207ENST00000485465 FAN1Q9Y2M0 1017 aa18.91■□□□□ 0.62
CHMP3-207ENST00000485465 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.9■□□□□ 0.62
CHMP3-207ENST00000485465 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.9■□□□□ 0.62
CHMP3-207ENST00000485465 B3GAT3O94766 335 aa18.9■□□□□ 0.62
CHMP3-207ENST00000485465 LAG3P18627 525 aa18.9■□□□□ 0.62
CHMP3-207ENST00000485465 IGFBP6P24592 240 aaPredicted RBP18.9■□□□□ 0.62
CHMP3-207ENST00000485465 PBX1P40424 430 aa18.9■□□□□ 0.62
CHMP3-207ENST00000485465 TAF6P49848 677 aa18.9■□□□□ 0.62
CHMP3-207ENST00000485465 KLK7P49862 253 aa18.9■□□□□ 0.62
CHMP3-207ENST00000485465 LILRA4P59901 499 aa18.9■□□□□ 0.62
CHMP3-207ENST00000485465 PTPN21Q16825 1174 aa18.9■□□□□ 0.62
CHMP3-207ENST00000485465 ZNF699Q32M78 642 aa18.9■□□□□ 0.62
CHMP3-207ENST00000485465 TRIM65Q6PJ69 517 aa18.9■□□□□ 0.62
CHMP3-207ENST00000485465 CD300LGQ6UXG3 332 aa18.9■□□□□ 0.62
CHMP3-207ENST00000485465 CHRDL2Q6WN34 429 aa18.9■□□□□ 0.62
CHMP3-207ENST00000485465 C3orf58Q8NDZ4 430 aa18.9■□□□□ 0.62
CHMP3-207ENST00000485465 ELMO3Q96BJ8 720 aa18.9■□□□□ 0.62
CHMP3-207ENST00000485465 COLEC11Q9BWP8 271 aa18.9■□□□□ 0.62
CHMP3-207ENST00000485465 LSM14BQ9BX40 385 aaKnown RBP18.9■□□□□ 0.62
CHMP3-207ENST00000485465 IMPG2Q9BZV3 1241 aa18.9■□□□□ 0.62
CHMP3-207ENST00000485465 VRTNQ9H8Y1 702 aa18.9■□□□□ 0.62
CHMP3-207ENST00000485465 PRG3Q9Y2Y8 225 aaPredicted RBP18.9■□□□□ 0.62
CHMP3-207ENST00000485465 PCDHA11Q9Y5I1 949 aa18.9■□□□□ 0.62
CHMP3-207ENST00000485465 LCHNA4D1U4 455 aa18.89■□□□□ 0.61
CHMP3-207ENST00000485465 TMEM189-UBE2V1I3L0A0 370 aa18.89■□□□□ 0.61
CHMP3-207ENST00000485465 SPTLC1O15269 473 aa18.89■□□□□ 0.61
CHMP3-207ENST00000485465 KIF4AO95239 1232 aa18.89■□□□□ 0.61
CHMP3-207ENST00000485465 PAX3P23760 479 aa18.89■□□□□ 0.61
CHMP3-207ENST00000485465 ALDH7A1P49419 539 aaKnown RBP18.89■□□□□ 0.61
CHMP3-207ENST00000485465 NOP14P78316 857 aaKnown RBP18.89■□□□□ 0.61
CHMP3-207ENST00000485465 LRMPQ12912 555 aa18.89■□□□□ 0.61
CHMP3-207ENST00000485465 SV2CQ496J9 727 aa18.89■□□□□ 0.61
CHMP3-207ENST00000485465 SPOPLQ6IQ16 392 aa18.89■□□□□ 0.61
CHMP3-207ENST00000485465 DPY19L2P1Q6NXN4 242 aa18.89■□□□□ 0.61
CHMP3-207ENST00000485465 KCNT2Q6UVM3 1135 aa18.89■□□□□ 0.61
CHMP3-207ENST00000485465 COLGALT1Q8NBJ5 622 aa18.89■□□□□ 0.61
CHMP3-207ENST00000485465 MRFAP1L1Q96HT8 127 aa18.89■□□□□ 0.61
CHMP3-207ENST00000485465 PCMTD1Q96MG8 357 aaPredicted RBP18.89■□□□□ 0.61
CHMP3-207ENST00000485465 ZNF558Q96NG5 402 aa18.89■□□□□ 0.61
CHMP3-207ENST00000485465 APOBEC3GQ9HC16 384 aaKnown RBP18.89■□□□□ 0.61
CHMP3-207ENST00000485465 SIX2Q9NPC8 291 aa18.89■□□□□ 0.61
CHMP3-207ENST00000485465 PLCB1Q9NQ66 1216 aa18.89■□□□□ 0.61
CHMP3-207ENST00000485465 CARNS1A5YM72 827 aa18.88■□□□□ 0.61
CHMP3-207ENST00000485465 KPNA7A9QM74 516 aa18.88■□□□□ 0.61
CHMP3-207ENST00000485465 F8W810 466 aa18.88■□□□□ 0.61
CHMP3-207ENST00000485465 CLSTN1O94985 981 aa18.88■□□□□ 0.61
CHMP3-207ENST00000485465 ADCY5O95622 1261 aa18.88■□□□□ 0.61
CHMP3-207ENST00000485465 LINC00271P0C7V0 271 aa18.88■□□□□ 0.61
CHMP3-207ENST00000485465 MYOGP15173 224 aa18.88■□□□□ 0.61
CHMP3-207ENST00000485465 PBX3P40426 434 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms