RNA–Protein interactions for RNA: ENST00000485365.1

SFPQ-208, Transcript of splicing factor proline and glutamine rich, human

TSL 2

Gene SFPQ, Length 693 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SFPQ-208	ENST00000485365	SIL1	Q9H173	461 aa		5.81	□□□□□ -1.48
SFPQ-208	ENST00000485365	VPS33B	Q9H267	617 aa		5.81	□□□□□ -1.48
SFPQ-208	ENST00000485365	TAF1D	Q9H5J8	278 aa	Predicted RBP	5.81	□□□□□ -1.48
SFPQ-208	ENST00000485365	CNOT7	Q9UIV1	285 aa	Known RBP	5.81	□□□□□ -1.48
SFPQ-208	ENST00000485365	ASB1	Q9Y576	335 aa		5.81	□□□□□ -1.48
SFPQ-208	ENST00000485365	HS3ST4	Q9Y661	456 aa		5.81	□□□□□ -1.48
SFPQ-208	ENST00000485365	CHD4	Q14839	1912 aa		5.81	□□□□□ -1.48
SFPQ-208	ENST00000485365	ZNF804B	A4D1E1	1349 aa		5.8	□□□□□ -1.48
SFPQ-208	ENST00000485365	KIF16B	Q96L93	1317 aa		5.8	□□□□□ -1.48
SFPQ-208	ENST00000485365	COL11A2	P13942	1736 aa	Predicted RBP	5.8	□□□□□ -1.48
SFPQ-208	ENST00000485365	KIAA1551	Q9HCM1	1747 aa		5.8	□□□□□ -1.48
SFPQ-208	ENST00000485365	COL4A3	Q01955	1670 aa		5.8	□□□□□ -1.48
SFPQ-208	ENST00000485365	TNRC6C	Q9HCJ0	1690 aa	Known RBP	5.8	□□□□□ -1.48
SFPQ-208	ENST00000485365	SHTN1	A0MZ66	631 aa		5.8	□□□□□ -1.48
SFPQ-208	ENST00000485365	UBE2QL1	A1L167	161 aa		5.8	□□□□□ -1.48
SFPQ-208	ENST00000485365	YDJC	A8MPS7	323 aa		5.8	□□□□□ -1.48
SFPQ-208	ENST00000485365	SCD	O00767	359 aa		5.8	□□□□□ -1.48
SFPQ-208	ENST00000485365	GSTA4	O15217	222 aa		5.8	□□□□□ -1.48
SFPQ-208	ENST00000485365	FOXP2	O15409	715 aa		5.8	□□□□□ -1.48
SFPQ-208	ENST00000485365	H2AFY	O75367	372 aa	Known RBP	5.8	□□□□□ -1.48
SFPQ-208	ENST00000485365	ABHD16A	O95870	558 aa		5.8	□□□□□ -1.48
SFPQ-208	ENST00000485365	ITGB1	P05556	798 aa		5.8	□□□□□ -1.48
SFPQ-208	ENST00000485365	C6orf222	P0C671	652 aa	Predicted RBP	5.8	□□□□□ -1.48
SFPQ-208	ENST00000485365	ZNF37A	P17032	561 aa	Predicted RBP	5.8	□□□□□ -1.48
SFPQ-208	ENST00000485365	DNM2	P50570	870 aa		5.8	□□□□□ -1.48
SFPQ-208	ENST00000485365	SESN2	P58004	480 aa	Predicted RBP	5.8	□□□□□ -1.48
SFPQ-208	ENST00000485365	GRM1	Q13255	1194 aa		5.8	□□□□□ -1.48
SFPQ-208	ENST00000485365	LRRC24	Q50LG9	513 aa		5.8	□□□□□ -1.48
SFPQ-208	ENST00000485365	FAM47C	Q5HY64	1035 aa		5.8	□□□□□ -1.48
SFPQ-208	ENST00000485365	LRRC55	Q6ZSA7	311 aa		5.8	□□□□□ -1.48
SFPQ-208	ENST00000485365	ANKS3	Q6ZW76	656 aa		5.8	□□□□□ -1.48
SFPQ-208	ENST00000485365	PNMA8A	Q86V59	439 aa	Predicted RBP	5.8	□□□□□ -1.48
SFPQ-208	ENST00000485365	CNTROB	Q8N137	903 aa		5.8	□□□□□ -1.48
SFPQ-208	ENST00000485365	CALML6	Q8TD86	181 aa		5.8	□□□□□ -1.48
SFPQ-208	ENST00000485365	THAP3	Q8WTV1	239 aa	Predicted RBP	5.8	□□□□□ -1.48
SFPQ-208	ENST00000485365	GCDH	Q92947	438 aa	Predicted RBP	5.8	□□□□□ -1.48
SFPQ-208	ENST00000485365	TCF25	Q9BQ70	676 aa		5.8	□□□□□ -1.48
SFPQ-208	ENST00000485365	MXD3	Q9BW11	206 aa		5.8	□□□□□ -1.48
SFPQ-208	ENST00000485365	TANGO6	Q9C0B7	1094 aa		5.8	□□□□□ -1.48
SFPQ-208	ENST00000485365	USP44	Q9H0E7	712 aa		5.8	□□□□□ -1.48
SFPQ-208	ENST00000485365	SYNPO2L	Q9H987	977 aa		5.8	□□□□□ -1.48
SFPQ-208	ENST00000485365	KCNH7	Q9NS40	1196 aa		5.8	□□□□□ -1.48
SFPQ-208	ENST00000485365	RBM8A	Q9Y5S9	174 aa	Known RBP	5.8	□□□□□ -1.48
SFPQ-208	ENST00000485365	LRRFIP2	Q9Y608	721 aa	Known RBP	5.8	□□□□□ -1.48
SFPQ-208	ENST00000485365	RIC1	Q4ADV7	1423 aa		5.8	□□□□□ -1.48
SFPQ-208	ENST00000485365	GOLGB1	Q14789	3259 aa	Known RBP	5.8	□□□□□ -1.48
SFPQ-208	ENST00000485365	CACNA1S	Q13698	1873 aa		5.79	□□□□□ -1.48
SFPQ-208	ENST00000485365	ZBED9	Q6R2W3	1325 aa		5.79	□□□□□ -1.48
SFPQ-208	ENST00000485365	KRTAP29-1	A8MX34	341 aa	Predicted RBP	5.79	□□□□□ -1.48
SFPQ-208	ENST00000485365	GOLGA6L6	A8MZA4	724 aa		5.79	□□□□□ -1.48
SFPQ-208	ENST00000485365	GOLGA6L22	H0YM25	854 aa		5.79	□□□□□ -1.48
SFPQ-208	ENST00000485365	STK10	O94804	968 aa	Known RBP	5.79	□□□□□ -1.48
SFPQ-208	ENST00000485365	ATP2B1	P20020	1258 aa		5.79	□□□□□ -1.48
SFPQ-208	ENST00000485365	KLRK1	P26718	216 aa		5.79	□□□□□ -1.48
SFPQ-208	ENST00000485365	RBM5	P52756	815 aa	Known RBP eCLIP	5.79	□□□□□ -1.48
SFPQ-208	ENST00000485365	KRTAP10-9	P60411	292 aa		5.79	□□□□□ -1.48
SFPQ-208	ENST00000485365	CHAF1A	Q13111	956 aa	Predicted RBP	5.79	□□□□□ -1.48
SFPQ-208	ENST00000485365	FKBP15	Q5T1M5	1219 aa		5.79	□□□□□ -1.48
SFPQ-208	ENST00000485365	TTLL5	Q6EMB2	1281 aa		5.79	□□□□□ -1.48
SFPQ-208	ENST00000485365	ATF7IP	Q6VMQ6	1270 aa		5.79	□□□□□ -1.48
SFPQ-208	ENST00000485365	ELOA2	Q8IYF1	753 aa	Predicted RBP	5.79	□□□□□ -1.48
SFPQ-208	ENST00000485365	TMEM57	Q8N5G2	664 aa		5.79	□□□□□ -1.48
SFPQ-208	ENST00000485365	CISD2	Q8N5K1	135 aa	Known RBP	5.79	□□□□□ -1.48
SFPQ-208	ENST00000485365	ATXN2L	Q8WWM7	1075 aa	Known RBP	5.79	□□□□□ -1.48
SFPQ-208	ENST00000485365	GFM2	Q969S9	779 aa	Known RBP	5.79	□□□□□ -1.48
SFPQ-208	ENST00000485365	MEIS3	Q99687	375 aa		5.79	□□□□□ -1.48
SFPQ-208	ENST00000485365	IL23A	Q9NPF7	189 aa		5.79	□□□□□ -1.48
SFPQ-208	ENST00000485365	MAGEL2	Q9UJ55	1249 aa		5.79	□□□□□ -1.48
SFPQ-208	ENST00000485365	HDAC5	Q9UQL6	1122 aa		5.79	□□□□□ -1.48
SFPQ-208	ENST00000485365	ARFGEF2	Q9Y6D5	1785 aa		5.78	□□□□□ -1.48
SFPQ-208	ENST00000485365		A0A0A6YYK5	440 aa	Predicted RBP	5.78	□□□□□ -1.48
SFPQ-208	ENST00000485365	INO80B-WBP1	J3KQ70	363 aa		5.78	□□□□□ -1.48
SFPQ-208	ENST00000485365	KLF4	O43474	513 aa		5.78	□□□□□ -1.48
SFPQ-208	ENST00000485365	GNAI2	P04899	355 aa		5.78	□□□□□ -1.48
SFPQ-208	ENST00000485365	GNAI3	P08754	354 aa		5.78	□□□□□ -1.48
SFPQ-208	ENST00000485365	TRIM27	P14373	513 aa		5.78	□□□□□ -1.48
SFPQ-208	ENST00000485365	GYG1	P46976	350 aa		5.78	□□□□□ -1.48
SFPQ-208	ENST00000485365	OS9	Q13438	667 aa	Predicted RBP	5.78	□□□□□ -1.48
SFPQ-208	ENST00000485365	CAVIN4	Q5BKX8	364 aa		5.78	□□□□□ -1.48
SFPQ-208	ENST00000485365	HECTD2	Q5U5R9	776 aa		5.78	□□□□□ -1.48
SFPQ-208	ENST00000485365	KCNV1	Q6PIU1	500 aa		5.78	□□□□□ -1.48
SFPQ-208	ENST00000485365	OLFML1	Q6UWY5	402 aa		5.78	□□□□□ -1.48
SFPQ-208	ENST00000485365	USP50	Q70EL3	339 aa	Predicted RBP	5.78	□□□□□ -1.48
SFPQ-208	ENST00000485365	ZNF804A	Q7Z570	1209 aa		5.78	□□□□□ -1.48
SFPQ-208	ENST00000485365	MB21D1	Q8N884	522 aa		5.78	□□□□□ -1.48
SFPQ-208	ENST00000485365	ANKRD44	Q8N8A2	993 aa		5.78	□□□□□ -1.48
SFPQ-208	ENST00000485365	ARHGAP45	Q92619	1136 aa		5.78	□□□□□ -1.48
SFPQ-208	ENST00000485365	DCPS	Q96C86	337 aa	Known RBP	5.78	□□□□□ -1.48
SFPQ-208	ENST00000485365	KAZALD1	Q96I82	304 aa		5.78	□□□□□ -1.48
SFPQ-208	ENST00000485365	INO80B	Q9C086	356 aa	Predicted RBP	5.78	□□□□□ -1.48
SFPQ-208	ENST00000485365	COA1	Q9GZY4	146 aa		5.78	□□□□□ -1.48
SFPQ-208	ENST00000485365	TOR3A	Q9H497	397 aa		5.78	□□□□□ -1.48
SFPQ-208	ENST00000485365	GPRC5D	Q9NZD1	345 aa		5.78	□□□□□ -1.48
SFPQ-208	ENST00000485365	SAE1	Q9UBE0	346 aa	Predicted RBP	5.78	□□□□□ -1.48
SFPQ-208	ENST00000485365	DENND2A	Q9ULE3	1009 aa		5.78	□□□□□ -1.48
SFPQ-208	ENST00000485365	ABT1	Q9ULW3	272 aa	Known RBP	5.78	□□□□□ -1.48
SFPQ-208	ENST00000485365	SCAF8	Q9UPN6	1271 aa	Known RBP	5.78	□□□□□ -1.48
SFPQ-208	ENST00000485365	PA2G4	Q9UQ80	394 aa	Known RBP	5.78	□□□□□ -1.48
SFPQ-208	ENST00000485365	PCDHA9	Q9Y5H5	950 aa		5.78	□□□□□ -1.48
SFPQ-208	ENST00000485365	ARFGEF1	Q9Y6D6	1849 aa		5.78	□□□□□ -1.48

Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms