RNA–Protein interactions for RNA: ENST00000485363.1

SIK3-211, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-211ENST00000485363 CD302Q8IX05 232 aa17.28■□□□□ 0.36
SIK3-211ENST00000485363 TMEM105Q8N8V8 129 aa17.28■□□□□ 0.36
SIK3-211ENST00000485363 FLCNQ8NFG4 579 aa17.28■□□□□ 0.36
SIK3-211ENST00000485363 DDX12PQ92771 950 aa17.28■□□□□ 0.36
SIK3-211ENST00000485363 USP28Q96RU2 1077 aa17.28■□□□□ 0.36
SIK3-211ENST00000485363 IRF2BPLQ9H1B7 796 aa17.28■□□□□ 0.36
SIK3-211ENST00000485363 WNT16Q9UBV4 365 aa17.28■□□□□ 0.36
SIK3-211ENST00000485363 FBXL5Q9UKA1 691 aa17.28■□□□□ 0.36
SIK3-211ENST00000485363 PCDHB8Q9UN66 801 aa17.28■□□□□ 0.36
SIK3-211ENST00000485363 WDR27A2RRH5 827 aa17.27■□□□□ 0.36
SIK3-211ENST00000485363 PRRG1O14668 218 aa17.27■□□□□ 0.36
SIK3-211ENST00000485363 LRG1P02750 347 aa17.27■□□□□ 0.36
SIK3-211ENST00000485363 ADRB2P07550 413 aa17.27■□□□□ 0.36
SIK3-211ENST00000485363 CFHP08603 1231 aa17.27■□□□□ 0.36
SIK3-211ENST00000485363 SRFP11831 508 aa17.27■□□□□ 0.36
SIK3-211ENST00000485363 ATF2P15336 505 aa17.27■□□□□ 0.36
SIK3-211ENST00000485363 HTR4Q13639 388 aa17.27■□□□□ 0.36
SIK3-211ENST00000485363 PABPC1LQ4VXU2 614 aaKnown RBP17.27■□□□□ 0.36
SIK3-211ENST00000485363 TPGS2Q68CL5 300 aa17.27■□□□□ 0.36
SIK3-211ENST00000485363 SLFN12LQ6IEE8 588 aa17.27■□□□□ 0.36
SIK3-211ENST00000485363 SLC39A4Q6P5W5 647 aa17.27■□□□□ 0.36
SIK3-211ENST00000485363 CCDC73Q6ZRK6 1079 aa17.27■□□□□ 0.36
SIK3-211ENST00000485363 SFR1Q86XK3 245 aa17.27■□□□□ 0.36
SIK3-211ENST00000485363 SIX5Q8N196 739 aa17.27■□□□□ 0.36
SIK3-211ENST00000485363 FGF13Q92913 245 aa17.27■□□□□ 0.36
SIK3-211ENST00000485363 FAM212AQ96EL1 285 aa17.27■□□□□ 0.36
SIK3-211ENST00000485363 HCFC1R1Q9NWW0 138 aa17.27■□□□□ 0.36
SIK3-211ENST00000485363 DNMT3BQ9UBC3 853 aaKnown RBP17.27■□□□□ 0.36
SIK3-211ENST00000485363 CPSF3Q9UKF6 684 aaKnown RBP17.27■□□□□ 0.36
SIK3-211ENST00000485363 KCNH3Q9ULD8 1083 aa17.27■□□□□ 0.36
SIK3-211ENST00000485363 NUMBLQ9Y6R0 609 aa17.27■□□□□ 0.36
SIK3-211ENST00000485363 NOTCH4Q99466 2003 aa17.26■□□□□ 0.35
SIK3-211ENST00000485363 MYH15Q9Y2K3 1946 aa17.26■□□□□ 0.35
SIK3-211ENST00000485363 ARHGEF37A1IGU5 675 aa17.26■□□□□ 0.35
SIK3-211ENST00000485363 M0QZQ0 153 aa17.26■□□□□ 0.35
SIK3-211ENST00000485363 GALR2O43603 387 aaPredicted RBP17.26■□□□□ 0.35
SIK3-211ENST00000485363 GAP43P17677 238 aa17.26■□□□□ 0.35
SIK3-211ENST00000485363 MRE11P49959 708 aa17.26■□□□□ 0.35
SIK3-211ENST00000485363 ADALQ6DHV7 355 aa17.26■□□□□ 0.35
SIK3-211ENST00000485363 MTSS1LQ765P7 747 aa17.26■□□□□ 0.35
SIK3-211ENST00000485363 ZNF720Q7Z2F6 126 aa17.26■□□□□ 0.35
SIK3-211ENST00000485363 BEST2Q8NFU1 509 aa17.26■□□□□ 0.35
SIK3-211ENST00000485363 ITFG1Q8TB96 612 aa17.26■□□□□ 0.35
SIK3-211ENST00000485363 HVCN1Q96D96 273 aa17.26■□□□□ 0.35
SIK3-211ENST00000485363 CYP4F11Q9HBI6 524 aa17.26■□□□□ 0.35
SIK3-211ENST00000485363 SEL1LQ9UBV2 794 aa17.26■□□□□ 0.35
SIK3-211ENST00000485363 MYMKA6NI61 221 aa17.25■□□□□ 0.35
SIK3-211ENST00000485363 ANKRD63C9JTQ0 380 aa17.25■□□□□ 0.35
SIK3-211ENST00000485363 NPR3P17342 541 aa17.25■□□□□ 0.35
SIK3-211ENST00000485363 PTPN2P17706 415 aa17.25■□□□□ 0.35
SIK3-211ENST00000485363 STAT6P42226 847 aa17.25■□□□□ 0.35
SIK3-211ENST00000485363 NASPP49321 788 aaPredicted RBP17.25■□□□□ 0.35
SIK3-211ENST00000485363 YWHAHQ04917 246 aaPredicted RBP17.25■□□□□ 0.35
SIK3-211ENST00000485363 SPATA1Q5VX52 437 aa17.25■□□□□ 0.35
SIK3-211ENST00000485363 CWF19L1Q69YN2 538 aaKnown RBP17.25■□□□□ 0.35
SIK3-211ENST00000485363 JADE1Q6IE81 842 aa17.25■□□□□ 0.35
SIK3-211ENST00000485363 DSTYKQ6XUX3 929 aa17.25■□□□□ 0.35
SIK3-211ENST00000485363 TCEAL8Q8IYN2 117 aa17.25■□□□□ 0.35
SIK3-211ENST00000485363 TMEM130Q8N3G9 435 aa17.25■□□□□ 0.35
SIK3-211ENST00000485363 FGF14Q92915 247 aa17.25■□□□□ 0.35
SIK3-211ENST00000485363 SNX21Q969T3 373 aa17.25■□□□□ 0.35
SIK3-211ENST00000485363 DNAJC19Q96DA6 116 aa17.25■□□□□ 0.35
SIK3-211ENST00000485363 OXCT2Q9BYC2 517 aaPredicted RBP17.25■□□□□ 0.35
SIK3-211ENST00000485363 MRPL44Q9H9J2 332 aaKnown RBP17.25■□□□□ 0.35
SIK3-211ENST00000485363 AFF4Q9UHB7 1163 aaKnown RBP17.25■□□□□ 0.35
SIK3-211ENST00000485363 MAFFQ9ULX9 164 aa17.25■□□□□ 0.35
SIK3-211ENST00000485363 DERAQ9Y315 318 aa17.25■□□□□ 0.35
SIK3-211ENST00000485363 MRPS23Q9Y3D9 190 aaKnown RBP17.25■□□□□ 0.35
SIK3-211ENST00000485363 STYXL1Q9Y6J8 313 aa17.25■□□□□ 0.35
SIK3-211ENST00000485363 ANK1P16157 1881 aa17.24■□□□□ 0.35
SIK3-211ENST00000485363 OAZ2O95190 189 aa17.24■□□□□ 0.35
SIK3-211ENST00000485363 SEC24AO95486 1093 aa17.24■□□□□ 0.35
SIK3-211ENST00000485363 RHOP08100 348 aa17.24■□□□□ 0.35
SIK3-211ENST00000485363 CPB1P15086 417 aa17.24■□□□□ 0.35
SIK3-211ENST00000485363 AOC1P19801 751 aa17.24■□□□□ 0.35
SIK3-211ENST00000485363 RFX1P22670 979 aa17.24■□□□□ 0.35
SIK3-211ENST00000485363 PAX3P23760 479 aa17.24■□□□□ 0.35
SIK3-211ENST00000485363 AARSP49588 968 aaKnown RBP eCLIP17.24■□□□□ 0.35
SIK3-211ENST00000485363 ACOT2P49753 483 aa17.24■□□□□ 0.35
SIK3-211ENST00000485363 GUCY2FP51841 1108 aa17.24■□□□□ 0.35
SIK3-211ENST00000485363 STK38Q15208 465 aa17.24■□□□□ 0.35
SIK3-211ENST00000485363 PARM1Q6UWI2 310 aa17.24■□□□□ 0.35
SIK3-211ENST00000485363 ST13P5Q8NFI4 369 aaPredicted RBP17.24■□□□□ 0.35
SIK3-211ENST00000485363 GPR152Q8TDT2 470 aa17.24■□□□□ 0.35
SIK3-211ENST00000485363 RTP3Q9BQQ7 232 aa17.24■□□□□ 0.35
SIK3-211ENST00000485363 PANK2Q9BZ23 570 aa17.24■□□□□ 0.35
SIK3-211ENST00000485363 ASB7Q9H672 318 aa17.24■□□□□ 0.35
SIK3-211ENST00000485363 AVENQ9NQS1 362 aaPredicted RBP17.24■□□□□ 0.35
SIK3-211ENST00000485363 SLC2A4RGQ9NR83 387 aa17.24■□□□□ 0.35
SIK3-211ENST00000485363 AGO2Q9UKV8 859 aaKnown RBP17.24■□□□□ 0.35
SIK3-211ENST00000485363 EXOC7Q9UPT5 735 aa17.24■□□□□ 0.35
SIK3-211ENST00000485363 INSL5Q9Y5Q6 135 aa17.24■□□□□ 0.35
SIK3-211ENST00000485363 CACNA1HO95180 2353 aa17.23■□□□□ 0.35
SIK3-211ENST00000485363 KRBA1A5PL33 1030 aa17.23■□□□□ 0.35
SIK3-211ENST00000485363 TISP43B9A030 160 aa17.23■□□□□ 0.35
SIK3-211ENST00000485363 H0Y858 1186 aa17.23■□□□□ 0.35
SIK3-211ENST00000485363 STK25O00506 426 aa17.23■□□□□ 0.35
SIK3-211ENST00000485363 PPP1R37O75864 691 aa17.23■□□□□ 0.35
SIK3-211ENST00000485363 IDEP14735 1019 aa17.23■□□□□ 0.35
SIK3-211ENST00000485363 POU5F1Q01860 360 aaKnown RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms