RNA–Protein interactions for RNA: ENST00000484546.1

CDK5RAP2-217, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 1 (best)

Gene CDK5RAP2, Length 1,269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-217ENST00000484546 RPL13P26373 211 aaKnown RBP12.69□□□□□ -0.38
CDK5RAP2-217ENST00000484546 LRPAP1P30533 357 aa12.69□□□□□ -0.38
CDK5RAP2-217ENST00000484546 HOXD13P35453 343 aa12.69□□□□□ -0.38
CDK5RAP2-217ENST00000484546 BRCC3P46736 316 aa12.69□□□□□ -0.38
CDK5RAP2-217ENST00000484546 GUCY2FP51841 1108 aa12.69□□□□□ -0.38
CDK5RAP2-217ENST00000484546 KCNC3Q14003 757 aa12.69□□□□□ -0.38
CDK5RAP2-217ENST00000484546 CLUL1Q15846 466 aa12.69□□□□□ -0.38
CDK5RAP2-217ENST00000484546 PSMD5Q16401 504 aa12.69□□□□□ -0.38
CDK5RAP2-217ENST00000484546 PUS10Q3MIT2 529 aaKnown RBP12.69□□□□□ -0.38
CDK5RAP2-217ENST00000484546 ZNF658Q5TYW1 1059 aaPredicted RBP12.69□□□□□ -0.38
CDK5RAP2-217ENST00000484546 PTCRAQ6ISU1 281 aaPredicted RBP12.69□□□□□ -0.38
CDK5RAP2-217ENST00000484546 ANKS3Q6ZW76 656 aa12.69□□□□□ -0.38
CDK5RAP2-217ENST00000484546 TAS1R1Q7RTX1 841 aa12.69□□□□□ -0.38
CDK5RAP2-217ENST00000484546 USP37Q86T82 979 aa12.69□□□□□ -0.38
CDK5RAP2-217ENST00000484546 CBWD2Q8IUF1 395 aa12.69□□□□□ -0.38
CDK5RAP2-217ENST00000484546 GLYCTKQ8IVS8 523 aa12.69□□□□□ -0.38
CDK5RAP2-217ENST00000484546 ELOA2Q8IYF1 753 aaPredicted RBP12.69□□□□□ -0.38
CDK5RAP2-217ENST00000484546 GUF1Q8N442 669 aaKnown RBP12.69□□□□□ -0.38
CDK5RAP2-217ENST00000484546 APPL2Q8NEU8 664 aa12.69□□□□□ -0.38
CDK5RAP2-217ENST00000484546 MSLNLQ96KJ4 702 aa12.69□□□□□ -0.38
CDK5RAP2-217ENST00000484546 ZNF560Q96MR9 790 aa12.69□□□□□ -0.38
CDK5RAP2-217ENST00000484546 KLHL5Q96PQ7 755 aa12.69□□□□□ -0.38
CDK5RAP2-217ENST00000484546 PDE11AQ9HCR9 933 aa12.69□□□□□ -0.38
CDK5RAP2-217ENST00000484546 DPP3Q9NY33 737 aa12.69□□□□□ -0.38
CDK5RAP2-217ENST00000484546 CD207Q9UJ71 328 aa12.69□□□□□ -0.38
CDK5RAP2-217ENST00000484546 PCDHA5Q9Y5H7 936 aa12.69□□□□□ -0.38
CDK5RAP2-217ENST00000484546 H7C4K7 107 aa12.68□□□□□ -0.38
CDK5RAP2-217ENST00000484546 SYN3O14994 580 aa12.68□□□□□ -0.38
CDK5RAP2-217ENST00000484546 LILRB3O75022 631 aa12.68□□□□□ -0.38
CDK5RAP2-217ENST00000484546 GLUD1P00367 558 aa12.68□□□□□ -0.38
CDK5RAP2-217ENST00000484546 NR3C1P04150 777 aa12.68□□□□□ -0.38
CDK5RAP2-217ENST00000484546 CNPP09543 421 aaKnown RBP12.68□□□□□ -0.38
CDK5RAP2-217ENST00000484546 IL9P15248 144 aa12.68□□□□□ -0.38
CDK5RAP2-217ENST00000484546 PAX3P23760 479 aa12.68□□□□□ -0.38
CDK5RAP2-217ENST00000484546 TKTP29401 623 aaKnown RBP12.68□□□□□ -0.38
CDK5RAP2-217ENST00000484546 PPP1R2P41236 205 aa12.68□□□□□ -0.38
CDK5RAP2-217ENST00000484546 PNPLA4P41247 253 aa12.68□□□□□ -0.38
CDK5RAP2-217ENST00000484546 C1QBPQ07021 282 aaKnown RBP12.68□□□□□ -0.38
CDK5RAP2-217ENST00000484546 SMAD4Q13485 552 aaKnown RBP12.68□□□□□ -0.38
CDK5RAP2-217ENST00000484546 ZBTB6Q15916 424 aa12.68□□□□□ -0.38
CDK5RAP2-217ENST00000484546 RTP2Q5QGT7 225 aa12.68□□□□□ -0.38
CDK5RAP2-217ENST00000484546 KIAA0319Q5VV43 1072 aa12.68□□□□□ -0.38
CDK5RAP2-217ENST00000484546 C9orf57Q5W0N0 161 aa12.68□□□□□ -0.38
CDK5RAP2-217ENST00000484546 CEP135Q66GS9 1140 aa12.68□□□□□ -0.38
CDK5RAP2-217ENST00000484546 PRSS55Q6UWB4 352 aaPredicted RBP12.68□□□□□ -0.38
CDK5RAP2-217ENST00000484546 C12orf56Q8IXR9 622 aa12.68□□□□□ -0.38
CDK5RAP2-217ENST00000484546 GPR65Q8IYL9 337 aa12.68□□□□□ -0.38
CDK5RAP2-217ENST00000484546 C3orf58Q8NDZ4 430 aa12.68□□□□□ -0.38
CDK5RAP2-217ENST00000484546 ZSWIM2Q8NEG5 633 aa12.68□□□□□ -0.38
CDK5RAP2-217ENST00000484546 PIK3R5Q8WYR1 880 aa12.68□□□□□ -0.38
CDK5RAP2-217ENST00000484546 ERCC4Q92889 916 aaPredicted RBP12.68□□□□□ -0.38
CDK5RAP2-217ENST00000484546 CCDC127Q96BQ5 260 aa12.68□□□□□ -0.38
CDK5RAP2-217ENST00000484546 NECAB3Q96P71 396 aaPredicted RBP12.68□□□□□ -0.38
CDK5RAP2-217ENST00000484546 CHST7Q9NS84 486 aa12.68□□□□□ -0.38
CDK5RAP2-217ENST00000484546 DZANK1Q9NVP4 752 aa12.68□□□□□ -0.38
CDK5RAP2-217ENST00000484546 HCFC2Q9Y5Z7 792 aa12.68□□□□□ -0.38
CDK5RAP2-217ENST00000484546 VWA8A3KMH1 1905 aa12.68□□□□□ -0.38
CDK5RAP2-217ENST00000484546 ANK1P16157 1881 aa12.68□□□□□ -0.38
CDK5RAP2-217ENST00000484546 GRXCR2A6NFK2 248 aa12.67□□□□□ -0.38
CDK5RAP2-217ENST00000484546 PSMA7O14818 248 aa12.67□□□□□ -0.38
CDK5RAP2-217ENST00000484546 TEX28O15482 410 aa12.67□□□□□ -0.38
CDK5RAP2-217ENST00000484546 MBTPS2O43462 519 aa12.67□□□□□ -0.38
CDK5RAP2-217ENST00000484546 ITGB3P05106 788 aa12.67□□□□□ -0.38
CDK5RAP2-217ENST00000484546 ODC1P11926 461 aa12.67□□□□□ -0.38
CDK5RAP2-217ENST00000484546 HOXB8P17481 243 aaPredicted RBP12.67□□□□□ -0.38
CDK5RAP2-217ENST00000484546 FGFR3P22607 806 aa12.67□□□□□ -0.38
CDK5RAP2-217ENST00000484546 NR2F2P24468 414 aa12.67□□□□□ -0.38
CDK5RAP2-217ENST00000484546 IGFBP6P24592 240 aaPredicted RBP12.67□□□□□ -0.38
CDK5RAP2-217ENST00000484546 TAF6P49848 677 aa12.67□□□□□ -0.38
CDK5RAP2-217ENST00000484546 CAMK4Q16566 473 aa12.67□□□□□ -0.38
CDK5RAP2-217ENST00000484546 DUOXA2Q1HG44 320 aa12.67□□□□□ -0.38
CDK5RAP2-217ENST00000484546 SV2CQ496J9 727 aa12.67□□□□□ -0.38
CDK5RAP2-217ENST00000484546 ISM2Q6H9L7 571 aa12.67□□□□□ -0.38
CDK5RAP2-217ENST00000484546 ZNF280DQ6N043 979 aa12.67□□□□□ -0.38
CDK5RAP2-217ENST00000484546 CES5AQ6NT32 575 aa12.67□□□□□ -0.38
CDK5RAP2-217ENST00000484546 CD300LGQ6UXG3 332 aa12.67□□□□□ -0.38
CDK5RAP2-217ENST00000484546 TMEM184AQ6ZMB5 413 aa12.67□□□□□ -0.38
CDK5RAP2-217ENST00000484546 METTL23Q86XA0 190 aa12.67□□□□□ -0.38
CDK5RAP2-217ENST00000484546 PALB2Q86YC2 1186 aa12.67□□□□□ -0.38
CDK5RAP2-217ENST00000484546 WDR49Q8IV35 697 aa12.67□□□□□ -0.38
CDK5RAP2-217ENST00000484546 EFCAB13Q8IY85 973 aa12.67□□□□□ -0.38
CDK5RAP2-217ENST00000484546 SMYD4Q8IYR2 804 aaPredicted RBP12.67□□□□□ -0.38
CDK5RAP2-217ENST00000484546 CSGALNACT2Q8N6G5 542 aa12.67□□□□□ -0.38
CDK5RAP2-217ENST00000484546 SMRP1Q8NCR6 262 aa12.67□□□□□ -0.38
CDK5RAP2-217ENST00000484546 SUSD3Q96L08 255 aa12.67□□□□□ -0.38
CDK5RAP2-217ENST00000484546 UHRF1Q96T88 793 aaPredicted RBP12.67□□□□□ -0.38
CDK5RAP2-217ENST00000484546 MTMR12Q9C0I1 747 aa12.67□□□□□ -0.38
CDK5RAP2-217ENST00000484546 KCTD10Q9H3F6 313 aa12.67□□□□□ -0.38
CDK5RAP2-217ENST00000484546 RXFP1Q9HBX9 757 aa12.67□□□□□ -0.38
CDK5RAP2-217ENST00000484546 FNIP2Q9P278 1114 aa12.67□□□□□ -0.38
CDK5RAP2-217ENST00000484546 ITGA11Q9UKX5 1188 aa12.67□□□□□ -0.38
CDK5RAP2-217ENST00000484546 PCDHB8Q9UN66 801 aa12.67□□□□□ -0.38
CDK5RAP2-217ENST00000484546 PLXNA3P51805 1871 aa12.67□□□□□ -0.38
CDK5RAP2-217ENST00000484546 VCANP13611 3396 aa12.66□□□□□ -0.38
CDK5RAP2-217ENST00000484546 TTC28Q96AY4 2481 aa12.66□□□□□ -0.38
CDK5RAP2-217ENST00000484546 DLL1O00548 723 aa12.66□□□□□ -0.38
CDK5RAP2-217ENST00000484546 PHACTR2O75167 634 aa12.66□□□□□ -0.38
CDK5RAP2-217ENST00000484546 KRT13P13646 458 aa12.66□□□□□ -0.38
CDK5RAP2-217ENST00000484546 EPCAMP16422 314 aa12.66□□□□□ -0.38
CDK5RAP2-217ENST00000484546 RPL17P18621 184 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms