RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 NFIL3Q16649 462 aa7.51□□□□□ -1.21
BRCA1-216ENST00000484087 MIIPQ5JXC2 388 aa7.51□□□□□ -1.21
BRCA1-216ENST00000484087 PLPP4Q5VZY2 271 aa7.51□□□□□ -1.21
BRCA1-216ENST00000484087 ZNF720Q7Z2F6 126 aa7.51□□□□□ -1.21
BRCA1-216ENST00000484087 CACNA2D4Q7Z3S7 1137 aa7.51□□□□□ -1.21
BRCA1-216ENST00000484087 SRGAP1Q7Z6B7 1085 aa7.51□□□□□ -1.21
BRCA1-216ENST00000484087 TMEM139Q8IV31 216 aa7.51□□□□□ -1.21
BRCA1-216ENST00000484087 ZC3H3Q8IXZ2 948 aaKnown RBP7.51□□□□□ -1.21
BRCA1-216ENST00000484087 THNSL1Q8IYQ7 743 aa7.51□□□□□ -1.21
BRCA1-216ENST00000484087 ABI1Q8IZP0 508 aa7.51□□□□□ -1.21
BRCA1-216ENST00000484087 CEP120Q8N960 986 aa7.51□□□□□ -1.21
BRCA1-216ENST00000484087 GLIS3Q8NEA6 775 aa7.51□□□□□ -1.21
BRCA1-216ENST00000484087 NEK11Q8NG66 645 aa7.51□□□□□ -1.21
BRCA1-216ENST00000484087 SPPL3Q8TCT6 385 aa7.51□□□□□ -1.21
BRCA1-216ENST00000484087 ZNF592Q92610 1267 aa7.51□□□□□ -1.21
BRCA1-216ENST00000484087 MRPL38Q96DV4 380 aaKnown RBP7.51□□□□□ -1.21
BRCA1-216ENST00000484087 EDEM3Q9BZQ6 932 aa7.51□□□□□ -1.21
BRCA1-216ENST00000484087 TMEM117Q9H0C3 514 aa7.51□□□□□ -1.21
BRCA1-216ENST00000484087 NUCKS1Q9H1E3 243 aaKnown RBP7.51□□□□□ -1.21
BRCA1-216ENST00000484087 IKZF4Q9H2S9 585 aa7.51□□□□□ -1.21
BRCA1-216ENST00000484087 MMRN2Q9H8L6 949 aa7.51□□□□□ -1.21
BRCA1-216ENST00000484087 TBC1D13Q9NVG8 400 aa7.51□□□□□ -1.21
BRCA1-216ENST00000484087 MIOSQ9NXC5 875 aa7.51□□□□□ -1.21
BRCA1-216ENST00000484087 CGNQ9P2M7 1197 aaKnown RBP7.51□□□□□ -1.21
BRCA1-216ENST00000484087 ARMCX3Q9UH62 379 aaPredicted RBP7.51□□□□□ -1.21
BRCA1-216ENST00000484087 CDH22Q9UJ99 828 aa7.51□□□□□ -1.21
BRCA1-216ENST00000484087 FRMD4BQ9Y2L6 1034 aa7.51□□□□□ -1.21
BRCA1-216ENST00000484087 PPP2R2CQ9Y2T4 447 aa7.51□□□□□ -1.21
BRCA1-216ENST00000484087 TTC26A0AVF1 554 aa7.5□□□□□ -1.21
BRCA1-216ENST00000484087 H0YCG3 227 aa7.5□□□□□ -1.21
BRCA1-216ENST00000484087 K7ENM7 598 aa7.5□□□□□ -1.21
BRCA1-216ENST00000484087 SLC16A4O15374 487 aa7.5□□□□□ -1.21
BRCA1-216ENST00000484087 GAS2O43903 313 aaKnown RBP7.5□□□□□ -1.21
BRCA1-216ENST00000484087 TBX10O75333 385 aa7.5□□□□□ -1.21
BRCA1-216ENST00000484087 FGF18O76093 207 aa7.5□□□□□ -1.21
BRCA1-216ENST00000484087 PRKCBP05771 671 aa7.5□□□□□ -1.21
BRCA1-216ENST00000484087 HARSP12081 509 aaKnown RBP7.5□□□□□ -1.21
BRCA1-216ENST00000484087 PLS3P13797 630 aa7.5□□□□□ -1.21
BRCA1-216ENST00000484087 KCNA5P22460 613 aa7.5□□□□□ -1.21
BRCA1-216ENST00000484087 IGFBP6P24592 240 aaPredicted RBP7.5□□□□□ -1.21
BRCA1-216ENST00000484087 NMT1P30419 496 aaKnown RBP7.5□□□□□ -1.21
BRCA1-216ENST00000484087 CA8P35219 290 aa7.5□□□□□ -1.21
BRCA1-216ENST00000484087 CYLC1P35663 651 aaPredicted RBP7.5□□□□□ -1.21
BRCA1-216ENST00000484087 PSMC2P35998 433 aaKnown RBP7.5□□□□□ -1.21
BRCA1-216ENST00000484087 SCNN1GP51170 649 aa7.5□□□□□ -1.21
BRCA1-216ENST00000484087 CASP5P51878 434 aa7.5□□□□□ -1.21
BRCA1-216ENST00000484087 BCAR1P56945 870 aa7.5□□□□□ -1.21
BRCA1-216ENST00000484087 SNRPFP62306 86 aaKnown RBP7.5□□□□□ -1.21
BRCA1-216ENST00000484087 HYAL1Q12794 435 aa7.5□□□□□ -1.21
BRCA1-216ENST00000484087 TFDP1Q14186 410 aa7.5□□□□□ -1.21
BRCA1-216ENST00000484087 MYBPC2Q14324 1141 aa7.5□□□□□ -1.21
BRCA1-216ENST00000484087 MXD4Q14582 209 aaPredicted RBP7.5□□□□□ -1.21
BRCA1-216ENST00000484087 CDCA2Q69YH5 1023 aaPredicted RBP7.5□□□□□ -1.21
BRCA1-216ENST00000484087 KCNT2Q6UVM3 1135 aa7.5□□□□□ -1.21
BRCA1-216ENST00000484087 Q6ZNB5 142 aa7.5□□□□□ -1.21
BRCA1-216ENST00000484087 NYAP1Q6ZVC0 841 aa7.5□□□□□ -1.21
BRCA1-216ENST00000484087 TAS1R3Q7RTX0 852 aa7.5□□□□□ -1.21
BRCA1-216ENST00000484087 TRIM59Q8IWR1 403 aa7.5□□□□□ -1.21
BRCA1-216ENST00000484087 LRRC43Q8N309 656 aa7.5□□□□□ -1.21
BRCA1-216ENST00000484087 MCPH1Q8NEM0 835 aa7.5□□□□□ -1.21
BRCA1-216ENST00000484087 DEPTORQ8TB45 409 aa7.5□□□□□ -1.21
BRCA1-216ENST00000484087 KIFAP3Q92845 792 aa7.5□□□□□ -1.21
BRCA1-216ENST00000484087 ACCSQ96QU6 501 aa7.5□□□□□ -1.21
BRCA1-216ENST00000484087 GAD1Q99259 594 aa7.5□□□□□ -1.21
BRCA1-216ENST00000484087 C11orf84Q9BUA3 381 aaPredicted RBP7.5□□□□□ -1.21
BRCA1-216ENST00000484087 MKNK1Q9BUB5 465 aa7.5□□□□□ -1.21
BRCA1-216ENST00000484087 VN1R3Q9BXE9 311 aa7.5□□□□□ -1.21
BRCA1-216ENST00000484087 FGFBP2Q9BYJ0 223 aa7.5□□□□□ -1.21
BRCA1-216ENST00000484087 CCDC113Q9H0I3 377 aa7.5□□□□□ -1.21
BRCA1-216ENST00000484087 PDZD7Q9H5P4 517 aa7.5□□□□□ -1.21
BRCA1-216ENST00000484087 ELAC1Q9H777 363 aaKnown RBP7.5□□□□□ -1.21
BRCA1-216ENST00000484087 NRDE2Q9H7Z3 1164 aa7.5□□□□□ -1.21
BRCA1-216ENST00000484087 RSAD1Q9HA92 442 aa7.5□□□□□ -1.21
BRCA1-216ENST00000484087 C17orf75Q9HAS0 396 aa7.5□□□□□ -1.21
BRCA1-216ENST00000484087 CLDND1Q9NY35 253 aa7.5□□□□□ -1.21
BRCA1-216ENST00000484087 EXOC7Q9UPT5 735 aa7.5□□□□□ -1.21
BRCA1-216ENST00000484087 PPME1Q9Y570 386 aa7.5□□□□□ -1.21
BRCA1-216ENST00000484087 VWA8A3KMH1 1905 aa7.5□□□□□ -1.21
BRCA1-216ENST00000484087 CITO14578 2027 aa7.5□□□□□ -1.21
BRCA1-216ENST00000484087 TRIOO75962 3097 aa7.5□□□□□ -1.21
BRCA1-216ENST00000484087 SOWAHDA6NJG2 315 aa7.49□□□□□ -1.21
BRCA1-216ENST00000484087 CCDC169A6NNP5 214 aa7.49□□□□□ -1.21
BRCA1-216ENST00000484087 USP27XA6NNY8 438 aa7.49□□□□□ -1.21
BRCA1-216ENST00000484087 HIDE1A8MVS5 230 aa7.49□□□□□ -1.21
BRCA1-216ENST00000484087 DLL1O00548 723 aa7.49□□□□□ -1.21
BRCA1-216ENST00000484087 AFPP02771 609 aaKnown RBP7.49□□□□□ -1.21
BRCA1-216ENST00000484087 IL9P15248 144 aa7.49□□□□□ -1.21
BRCA1-216ENST00000484087 ANK1P16157 1881 aa7.49□□□□□ -1.21
BRCA1-216ENST00000484087 POU3F3P20264 500 aaPredicted RBP7.49□□□□□ -1.21
BRCA1-216ENST00000484087 SCP2P22307 547 aa7.49□□□□□ -1.21
BRCA1-216ENST00000484087 NPTX2P47972 431 aa7.49□□□□□ -1.21
BRCA1-216ENST00000484087 NRIP1P48552 1158 aa7.49□□□□□ -1.21
BRCA1-216ENST00000484087 SLC11A1P49279 550 aa7.49□□□□□ -1.21
BRCA1-216ENST00000484087 OSTNP61366 133 aa7.49□□□□□ -1.21
BRCA1-216ENST00000484087 KRT83P78385 493 aa7.49□□□□□ -1.21
BRCA1-216ENST00000484087 DMP1Q13316 513 aaPredicted RBP7.49□□□□□ -1.21
BRCA1-216ENST00000484087 SEZ6Q53EL9 994 aa7.49□□□□□ -1.21
BRCA1-216ENST00000484087 GLRA4Q5JXX5 417 aa7.49□□□□□ -1.21
BRCA1-216ENST00000484087 TCERG1LQ5VWI1 586 aa7.49□□□□□ -1.21
BRCA1-216ENST00000484087 LLGL2Q6P1M3 1020 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms