RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 TWF2Q6IBS0 349 aaKnown RBP9.82□□□□□ -0.84
COL8A1-207ENST00000483969 TXNDC11Q6PKC3 985 aa9.82□□□□□ -0.84
COL8A1-207ENST00000483969 CAPN12Q6ZSI9 719 aa9.82□□□□□ -0.84
COL8A1-207ENST00000483969 SV2BQ7L1I2 683 aa9.82□□□□□ -0.84
COL8A1-207ENST00000483969 KCNK18Q7Z418 384 aa9.82□□□□□ -0.84
COL8A1-207ENST00000483969 TMCO2Q7Z6W1 182 aaPredicted RBP9.82□□□□□ -0.84
COL8A1-207ENST00000483969 FIBCD1Q8N539 461 aa9.82□□□□□ -0.84
COL8A1-207ENST00000483969 CNNM3Q8NE01 707 aa9.82□□□□□ -0.84
COL8A1-207ENST00000483969 RAD54LQ92698 747 aa9.82□□□□□ -0.84
COL8A1-207ENST00000483969 UTP4Q969X6 686 aaKnown RBP9.82□□□□□ -0.84
COL8A1-207ENST00000483969 UBL7Q96S82 380 aaPredicted RBP9.82□□□□□ -0.84
COL8A1-207ENST00000483969 TRAIPQ9BWF2 469 aa9.82□□□□□ -0.84
COL8A1-207ENST00000483969 PANK2Q9BZ23 570 aa9.82□□□□□ -0.84
COL8A1-207ENST00000483969 LRRC27Q9C0I9 530 aa9.82□□□□□ -0.84
COL8A1-207ENST00000483969 SCAND2PQ9GZW5 306 aaPredicted RBP9.82□□□□□ -0.84
COL8A1-207ENST00000483969 TMEM161AQ9NX61 479 aa9.82□□□□□ -0.84
COL8A1-207ENST00000483969 PIN4Q9Y237 131 aaKnown RBP9.82□□□□□ -0.84
COL8A1-207ENST00000483969 YBX2Q9Y2T7 364 aaKnown RBP9.82□□□□□ -0.84
COL8A1-207ENST00000483969 PHLPP2Q6ZVD8 1323 aa9.82□□□□□ -0.84
COL8A1-207ENST00000483969 CCDC169A6NNP5 214 aa9.81□□□□□ -0.84
COL8A1-207ENST00000483969 K7ERI5 159 aa9.81□□□□□ -0.84
COL8A1-207ENST00000483969 FSCN2O14926 492 aa9.81□□□□□ -0.84
COL8A1-207ENST00000483969 MGEA5O60502 916 aa9.81□□□□□ -0.84
COL8A1-207ENST00000483969 ZNF623O75123 536 aa9.81□□□□□ -0.84
COL8A1-207ENST00000483969 HIP1RO75146 1068 aa9.81□□□□□ -0.84
COL8A1-207ENST00000483969 DGKIO75912 1065 aa9.81□□□□□ -0.84
COL8A1-207ENST00000483969 CA3P07451 260 aa9.81□□□□□ -0.84
COL8A1-207ENST00000483969 MYOGP15173 224 aa9.81□□□□□ -0.84
COL8A1-207ENST00000483969 IBSPP21815 317 aaPredicted RBP9.81□□□□□ -0.84
COL8A1-207ENST00000483969 RAB27AP51159 221 aa9.81□□□□□ -0.84
COL8A1-207ENST00000483969 PEX3P56589 373 aa9.81□□□□□ -0.84
COL8A1-207ENST00000483969 BTG3Q14201 252 aaPredicted RBP9.81□□□□□ -0.84
COL8A1-207ENST00000483969 MAPK6Q16659 721 aa9.81□□□□□ -0.84
COL8A1-207ENST00000483969 USP49Q70CQ1 688 aa9.81□□□□□ -0.84
COL8A1-207ENST00000483969 ECHDC2Q86YB7 292 aa9.81□□□□□ -0.84
COL8A1-207ENST00000483969 KRTAP1-3Q8IUG1 177 aa9.81□□□□□ -0.84
COL8A1-207ENST00000483969 LINC01599Q8WXQ3 324 aa9.81□□□□□ -0.84
COL8A1-207ENST00000483969 RSPH1Q8WYR4 309 aa9.81□□□□□ -0.84
COL8A1-207ENST00000483969 LARP4BQ92615 738 aaKnown RBP9.81□□□□□ -0.84
COL8A1-207ENST00000483969 PGBD4Q96DM1 585 aa9.81□□□□□ -0.84
COL8A1-207ENST00000483969 CCDC51Q96ER9 411 aa9.81□□□□□ -0.84
COL8A1-207ENST00000483969 SPATA32Q96LK8 384 aa9.81□□□□□ -0.84
COL8A1-207ENST00000483969 SAMD11Q96NU1 681 aa9.81□□□□□ -0.84
COL8A1-207ENST00000483969 PYM1Q9BRP8 204 aaKnown RBP9.81□□□□□ -0.84
COL8A1-207ENST00000483969 NTPCRQ9BSD7 190 aaKnown RBP9.81□□□□□ -0.84
COL8A1-207ENST00000483969 RUSC1Q9BVN2 902 aa9.81□□□□□ -0.84
COL8A1-207ENST00000483969 FZD8Q9H461 694 aa9.81□□□□□ -0.84
COL8A1-207ENST00000483969 MINDY3Q9H8M7 445 aa9.81□□□□□ -0.84
COL8A1-207ENST00000483969 POLD4Q9HCU8 107 aa9.81□□□□□ -0.84
COL8A1-207ENST00000483969 KMT5AQ9NQR1 393 aa9.81□□□□□ -0.84
COL8A1-207ENST00000483969 AGPAT5Q9NUQ2 364 aa9.81□□□□□ -0.84
COL8A1-207ENST00000483969 PRMT7Q9NVM4 692 aaPredicted RBP9.81□□□□□ -0.84
COL8A1-207ENST00000483969 MTMR10Q9NXD2 777 aa9.81□□□□□ -0.84
COL8A1-207ENST00000483969 LARSQ9P2J5 1176 aaKnown RBP9.81□□□□□ -0.84
COL8A1-207ENST00000483969 ODF2LQ9ULJ1 636 aa9.81□□□□□ -0.84
COL8A1-207ENST00000483969 PCDHA7Q9UN72 937 aa9.81□□□□□ -0.84
COL8A1-207ENST00000483969 LTBP2Q14767 1821 aa9.8□□□□□ -0.84
COL8A1-207ENST00000483969 KIAA1324LA8MWY0 1029 aaPredicted RBP9.8□□□□□ -0.84
COL8A1-207ENST00000483969 H0YCG3 227 aa9.8□□□□□ -0.84
COL8A1-207ENST00000483969 RPLP1P05386 114 aaKnown RBP9.8□□□□□ -0.84
COL8A1-207ENST00000483969 PLS3P13797 630 aa9.8□□□□□ -0.84
COL8A1-207ENST00000483969 SCP2P22307 547 aa9.8□□□□□ -0.84
COL8A1-207ENST00000483969 STAT6P42226 847 aa9.8□□□□□ -0.84
COL8A1-207ENST00000483969 AMPD3Q01432 767 aa9.8□□□□□ -0.84
COL8A1-207ENST00000483969 TAP1Q03518 808 aa9.8□□□□□ -0.84
COL8A1-207ENST00000483969 MBTD1Q05BQ5 628 aa9.8□□□□□ -0.84
COL8A1-207ENST00000483969 DMP1Q13316 513 aaPredicted RBP9.8□□□□□ -0.84
COL8A1-207ENST00000483969 FAM187BQ17R55 369 aa9.8□□□□□ -0.84
COL8A1-207ENST00000483969 ARSHQ5FYA8 562 aa9.8□□□□□ -0.84
COL8A1-207ENST00000483969 CDCA2Q69YH5 1023 aaPredicted RBP9.8□□□□□ -0.84
COL8A1-207ENST00000483969 NOTUMQ6P988 496 aa9.8□□□□□ -0.84
COL8A1-207ENST00000483969 Q7L0L9 218 aa9.8□□□□□ -0.84
COL8A1-207ENST00000483969 GPBP1Q86WP2 473 aa9.8□□□□□ -0.84
COL8A1-207ENST00000483969 CMTR2Q8IYT2 770 aaKnown RBP9.8□□□□□ -0.84
COL8A1-207ENST00000483969 HACE1Q8IYU2 909 aa9.8□□□□□ -0.84
COL8A1-207ENST00000483969 ABI1Q8IZP0 508 aa9.8□□□□□ -0.84
COL8A1-207ENST00000483969 ARMC10Q8N2F6 343 aa9.8□□□□□ -0.84
COL8A1-207ENST00000483969 IQUBQ8NA54 791 aa9.8□□□□□ -0.84
COL8A1-207ENST00000483969 ZNF689Q96CS4 500 aaPredicted RBP9.8□□□□□ -0.84
COL8A1-207ENST00000483969 FAM161BQ96MY7 647 aa9.8□□□□□ -0.84
COL8A1-207ENST00000483969 TGS1Q96RS0 853 aaKnown RBP9.8□□□□□ -0.84
COL8A1-207ENST00000483969 TTYH1Q9H313 450 aaPredicted RBP9.8□□□□□ -0.84
COL8A1-207ENST00000483969 CUEDC2Q9H467 287 aa9.8□□□□□ -0.84
COL8A1-207ENST00000483969 UBN1Q9NPG3 1134 aa9.8□□□□□ -0.84
COL8A1-207ENST00000483969 BLOC1S4Q9NUP1 217 aa9.8□□□□□ -0.84
COL8A1-207ENST00000483969 FAM105AQ9NUU6 356 aa9.8□□□□□ -0.84
COL8A1-207ENST00000483969 RWDD3Q9Y3V2 267 aa9.8□□□□□ -0.84
COL8A1-207ENST00000483969 A0A1B0GUA9 196 aa9.79□□□□□ -0.84
COL8A1-207ENST00000483969 LINC01553A4QN01 128 aa9.79□□□□□ -0.84
COL8A1-207ENST00000483969 ACKR2O00590 384 aa9.79□□□□□ -0.84
COL8A1-207ENST00000483969 TM4SF5O14894 197 aa9.79□□□□□ -0.84
COL8A1-207ENST00000483969 TSPAN1O60635 241 aa9.79□□□□□ -0.84
COL8A1-207ENST00000483969 TBCAO75347 108 aaKnown RBP9.79□□□□□ -0.84
COL8A1-207ENST00000483969 FAM13AO94988 1023 aa9.79□□□□□ -0.84
COL8A1-207ENST00000483969 RB1P06400 928 aa9.79□□□□□ -0.84
COL8A1-207ENST00000483969 LIG1P18858 919 aa9.79□□□□□ -0.84
COL8A1-207ENST00000483969 EPHA1P21709 976 aa9.79□□□□□ -0.84
COL8A1-207ENST00000483969 HOXA11P31270 313 aaPredicted RBP9.79□□□□□ -0.84
COL8A1-207ENST00000483969 ABCD1P33897 745 aa9.79□□□□□ -0.84
COL8A1-207ENST00000483969 NPTX2P47972 431 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms