RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 TRPC3Q13507 836 aa14.16□□□□□ -0.14
CPNE1-225ENST00000483495 DCAF12L1Q5VU92 463 aa14.16□□□□□ -0.14
CPNE1-225ENST00000483495 PPP1R2P3Q6NXS1 205 aa14.16□□□□□ -0.14
CPNE1-225ENST00000483495 TLK2Q86UE8 772 aa14.16□□□□□ -0.14
CPNE1-225ENST00000483495 SOCS4Q8WXH5 440 aa14.16□□□□□ -0.14
CPNE1-225ENST00000483495 CD101Q93033 1021 aa14.16□□□□□ -0.14
CPNE1-225ENST00000483495 ADAMTS10Q9H324 1103 aa14.16□□□□□ -0.14
CPNE1-225ENST00000483495 ASB7Q9H672 318 aa14.16□□□□□ -0.14
CPNE1-225ENST00000483495 SETD4Q9NVD3 440 aa14.16□□□□□ -0.14
CPNE1-225ENST00000483495 FAM170AA1A519 330 aa14.15□□□□□ -0.14
CPNE1-225ENST00000483495 FAM155AB1AL88 458 aaPredicted RBP14.15□□□□□ -0.14
CPNE1-225ENST00000483495 CCDC188H7C350 402 aa14.15□□□□□ -0.14
CPNE1-225ENST00000483495 HAS3O00219 553 aa14.15□□□□□ -0.14
CPNE1-225ENST00000483495 ATMINO43313 823 aaPredicted RBP14.15□□□□□ -0.14
CPNE1-225ENST00000483495 SMIM10L2AP0DMW4 78 aa14.15□□□□□ -0.14
CPNE1-225ENST00000483495 SMIM10L2BP0DMW5 78 aa14.15□□□□□ -0.14
CPNE1-225ENST00000483495 MON1BQ7L1V2 547 aa14.15□□□□□ -0.14
CPNE1-225ENST00000483495 CPB2Q96IY4 423 aa14.15□□□□□ -0.14
CPNE1-225ENST00000483495 VCPIP1Q96JH7 1222 aa14.15□□□□□ -0.14
CPNE1-225ENST00000483495 PPP1R16BQ96T49 567 aa14.15□□□□□ -0.14
CPNE1-225ENST00000483495 APBA2Q99767 749 aa14.15□□□□□ -0.14
CPNE1-225ENST00000483495 ZFYVE28Q9HCC9 887 aa14.15□□□□□ -0.14
CPNE1-225ENST00000483495 CNOT8Q9UFF9 292 aaKnown RBP14.15□□□□□ -0.14
CPNE1-225ENST00000483495 SMIM35A0A1B0GVV1 85 aa14.14□□□□□ -0.15
CPNE1-225ENST00000483495 LACTBL1A8MY62 500 aa14.14□□□□□ -0.15
CPNE1-225ENST00000483495 ZMYND10O75800 440 aa14.14□□□□□ -0.15
CPNE1-225ENST00000483495 NFICP08651 508 aa14.14□□□□□ -0.15
CPNE1-225ENST00000483495 COMTP21964 271 aa14.14□□□□□ -0.15
CPNE1-225ENST00000483495 CYP2C19P33261 490 aa14.14□□□□□ -0.15
CPNE1-225ENST00000483495 ASPAP45381 313 aa14.14□□□□□ -0.15
CPNE1-225ENST00000483495 NSFP46459 744 aaKnown RBP14.14□□□□□ -0.15
CPNE1-225ENST00000483495 RNASE9P60153 205 aaKnown RBP14.14□□□□□ -0.15
CPNE1-225ENST00000483495 NOMO3P69849 1222 aa14.14□□□□□ -0.15
CPNE1-225ENST00000483495 ADAM17P78536 824 aa14.14□□□□□ -0.15
CPNE1-225ENST00000483495 CBX1P83916 185 aa14.14□□□□□ -0.15
CPNE1-225ENST00000483495 CLUL1Q15846 466 aa14.14□□□□□ -0.15
CPNE1-225ENST00000483495 CCL14Q16627 93 aa14.14□□□□□ -0.15
CPNE1-225ENST00000483495 ZNF699Q32M78 642 aa14.14□□□□□ -0.15
CPNE1-225ENST00000483495 PHF13Q86YI8 300 aaPredicted RBP14.14□□□□□ -0.15
CPNE1-225ENST00000483495 CXorf38Q8TB03 319 aa14.14□□□□□ -0.15
CPNE1-225ENST00000483495 ALG3Q92685 438 aa14.14□□□□□ -0.15
CPNE1-225ENST00000483495 CYFIP2Q96F07 1278 aa14.14□□□□□ -0.15
CPNE1-225ENST00000483495 KRT12Q99456 494 aa14.14□□□□□ -0.15
CPNE1-225ENST00000483495 ZSWIM1Q9BR11 485 aa14.14□□□□□ -0.15
CPNE1-225ENST00000483495 WNT8AQ9H1J5 351 aa14.14□□□□□ -0.15
CPNE1-225ENST00000483495 CISHQ9NSE2 258 aa14.14□□□□□ -0.15
CPNE1-225ENST00000483495 SIX4Q9UIU6 781 aa14.14□□□□□ -0.15
CPNE1-225ENST00000483495 GPR32O75388 356 aa14.14□□□□□ -0.15
CPNE1-225ENST00000483495 ERLIN2O94905 339 aa14.14□□□□□ -0.15
CPNE1-225ENST00000483495 MYBL2P10244 700 aa14.14□□□□□ -0.15
CPNE1-225ENST00000483495 PEX5P50542 639 aa14.14□□□□□ -0.15
CPNE1-225ENST00000483495 MESDQ14696 234 aa14.14□□□□□ -0.15
CPNE1-225ENST00000483495 PCBP1Q15365 356 aaKnown RBP eCLIP14.14□□□□□ -0.151e-8■■■■■ 45.6
CPNE1-225ENST00000483495 SLC10A6Q3KNW5 377 aa14.14□□□□□ -0.15
CPNE1-225ENST00000483495 NAA35Q5VZE5 725 aa14.14□□□□□ -0.15
CPNE1-225ENST00000483495 UBL4BQ8N7F7 174 aa14.14□□□□□ -0.15
CPNE1-225ENST00000483495 C1orf127Q8N9H9 656 aa14.14□□□□□ -0.15
CPNE1-225ENST00000483495 AENQ8WTP8 325 aaKnown RBP14.14□□□□□ -0.15
CPNE1-225ENST00000483495 ZNF606Q8WXB4 792 aa14.14□□□□□ -0.15
CPNE1-225ENST00000483495 CPA5Q8WXQ8 436 aa14.14□□□□□ -0.15
CPNE1-225ENST00000483495 VRTNQ9H8Y1 702 aa14.14□□□□□ -0.15
CPNE1-225ENST00000483495 GDF3Q9NR23 364 aa14.14□□□□□ -0.15
CPNE1-225ENST00000483495 CHORDC1Q9UHD1 332 aaPredicted RBP14.14□□□□□ -0.15
CPNE1-225ENST00000483495 TLL2Q9Y6L7 1015 aa14.14□□□□□ -0.15
CPNE1-225ENST00000483495 ANK1P16157 1881 aa14.14□□□□□ -0.15
CPNE1-225ENST00000483495 CFHP08603 1231 aa14.13□□□□□ -0.15
CPNE1-225ENST00000483495 CYP2B6P20813 491 aa14.13□□□□□ -0.15
CPNE1-225ENST00000483495 CTNNA2P26232 953 aa14.13□□□□□ -0.15
CPNE1-225ENST00000483495 CPT1AP50416 773 aa14.13□□□□□ -0.15
CPNE1-225ENST00000483495 YWHAEP62258 255 aaKnown RBP14.13□□□□□ -0.15
CPNE1-225ENST00000483495 SLC7A5Q01650 507 aa14.13□□□□□ -0.15
CPNE1-225ENST00000483495 SREBF2Q12772 1141 aa14.13□□□□□ -0.15
CPNE1-225ENST00000483495 MFSD10Q14728 455 aa14.13□□□□□ -0.15
CPNE1-225ENST00000483495 CASP8Q14790 479 aa14.13□□□□□ -0.15
CPNE1-225ENST00000483495 JADE1Q6IE81 842 aa14.13□□□□□ -0.15
CPNE1-225ENST00000483495 NT5DC4Q86YG4 428 aa14.13□□□□□ -0.15
CPNE1-225ENST00000483495 CCDC102AQ96A19 550 aa14.13□□□□□ -0.15
CPNE1-225ENST00000483495 RNPC3Q96LT9 517 aaKnown RBP14.13□□□□□ -0.15
CPNE1-225ENST00000483495 SCLT1Q96NL6 688 aa14.13□□□□□ -0.15
CPNE1-225ENST00000483495 NAP1L3Q99457 506 aaPredicted RBP14.13□□□□□ -0.15
CPNE1-225ENST00000483495 BCO2Q9BYV7 579 aa14.13□□□□□ -0.15
CPNE1-225ENST00000483495 C2CD2Q9Y426 696 aa14.13□□□□□ -0.15
CPNE1-225ENST00000483495 CCDC66A2RUB6 948 aa14.12□□□□□ -0.15
CPNE1-225ENST00000483495 BHMG1C9JSJ3 638 aaPredicted RBP14.12□□□□□ -0.15
CPNE1-225ENST00000483495 KRIT1O00522 736 aa14.12□□□□□ -0.15
CPNE1-225ENST00000483495 THAP12O43422 761 aa14.12□□□□□ -0.15
CPNE1-225ENST00000483495 LSM8O95777 96 aaKnown RBP14.12□□□□□ -0.15
CPNE1-225ENST00000483495 GLI1P08151 1106 aa14.12□□□□□ -0.15
CPNE1-225ENST00000483495 RRM1P23921 792 aa14.12□□□□□ -0.15
CPNE1-225ENST00000483495 ATICP31939 592 aa14.12□□□□□ -0.15
CPNE1-225ENST00000483495 CTNNA1P35221 906 aaKnown RBP14.12□□□□□ -0.15
CPNE1-225ENST00000483495 GRM5P41594 1212 aa14.12□□□□□ -0.15
CPNE1-225ENST00000483495 C1QBPQ07021 282 aaKnown RBP14.12□□□□□ -0.15
CPNE1-225ENST00000483495 PTP4A2Q12974 167 aa14.12□□□□□ -0.15
CPNE1-225ENST00000483495 DCAF4L1Q3SXM0 396 aa14.12□□□□□ -0.15
CPNE1-225ENST00000483495 CD302Q8IX05 232 aa14.12□□□□□ -0.15
CPNE1-225ENST00000483495 KRT35Q92764 455 aa14.12□□□□□ -0.15
CPNE1-225ENST00000483495 LENG1Q96BZ8 264 aaPredicted RBP14.12□□□□□ -0.15
CPNE1-225ENST00000483495 ADPGKQ9BRR6 497 aa14.12□□□□□ -0.15
CPNE1-225ENST00000483495 GCOM2Q9BZD3 368 aaPredicted RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms