RNA–Protein interactions for RNA: ENST00000483159.1

MRPL55-229, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 790 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-229ENST00000483159 BRSK2Q8IWQ3 736 aa13.4□□□□□ -0.26
MRPL55-229ENST00000483159 C12orf56Q8IXR9 622 aa13.4□□□□□ -0.26
MRPL55-229ENST00000483159 APPL2Q8NEU8 664 aa13.4□□□□□ -0.26
MRPL55-229ENST00000483159 ENGASEQ8NFI3 743 aa13.4□□□□□ -0.26
MRPL55-229ENST00000483159 CACTINQ8WUQ7 758 aaKnown RBP13.4□□□□□ -0.26
MRPL55-229ENST00000483159 TMEM174Q8WUU8 243 aa13.4□□□□□ -0.26
MRPL55-229ENST00000483159 SAAL1Q96ER3 474 aa13.4□□□□□ -0.26
MRPL55-229ENST00000483159 NECTIN4Q96NY8 510 aa13.4□□□□□ -0.26
MRPL55-229ENST00000483159 OXCT2Q9BYC2 517 aaPredicted RBP13.4□□□□□ -0.26
MRPL55-229ENST00000483159 PCIF1Q9H4Z3 704 aa13.4□□□□□ -0.26
MRPL55-229ENST00000483159 SFXN1Q9H9B4 322 aa13.4□□□□□ -0.26
MRPL55-229ENST00000483159 AGPAT3Q9NRZ7 376 aa13.4□□□□□ -0.26
MRPL55-229ENST00000483159 RBAKQ9NYW8 714 aaPredicted RBP13.4□□□□□ -0.26
MRPL55-229ENST00000483159 MTRRQ9UBK8 725 aa13.4□□□□□ -0.26
MRPL55-229ENST00000483159 VCANP13611 3396 aa13.4□□□□□ -0.26
MRPL55-229ENST00000483159 TDRD15B5MCY1 1934 aaKnown RBP13.4□□□□□ -0.26
MRPL55-229ENST00000483159 ATG2AQ2TAZ0 1938 aa13.4□□□□□ -0.26
MRPL55-229ENST00000483159 ANO9A1A5B4 782 aa13.39□□□□□ -0.27
MRPL55-229ENST00000483159 C19orf67A6NJJ6 358 aa13.39□□□□□ -0.27
MRPL55-229ENST00000483159 H7C4K7 107 aa13.39□□□□□ -0.27
MRPL55-229ENST00000483159 M0QZQ0 153 aa13.39□□□□□ -0.27
MRPL55-229ENST00000483159 TNFRSF10AO00220 468 aa13.39□□□□□ -0.27
MRPL55-229ENST00000483159 PIRO00625 290 aa13.39□□□□□ -0.27
MRPL55-229ENST00000483159 TGM5O43548 720 aa13.39□□□□□ -0.27
MRPL55-229ENST00000483159 RHOBTB3O94955 611 aa13.39□□□□□ -0.27
MRPL55-229ENST00000483159 PAPLNO95428 1278 aa13.39□□□□□ -0.27
MRPL55-229ENST00000483159 TKTP29401 623 aaKnown RBP13.39□□□□□ -0.27
MRPL55-229ENST00000483159 MCM4P33991 863 aa13.39□□□□□ -0.27
MRPL55-229ENST00000483159 MTHFRP42898 656 aa13.39□□□□□ -0.27
MRPL55-229ENST00000483159 AARSP49588 968 aaKnown RBP eCLIP13.39□□□□□ -0.27
MRPL55-229ENST00000483159 ZP2Q05996 745 aa13.39□□□□□ -0.27
MRPL55-229ENST00000483159 SNW1Q13573 536 aaKnown RBP13.39□□□□□ -0.27
MRPL55-229ENST00000483159 RAB33AQ14088 237 aa13.39□□□□□ -0.27
MRPL55-229ENST00000483159 MRPL58Q14197 206 aaKnown RBP13.39□□□□□ -0.27
MRPL55-229ENST00000483159 KCNB1Q14721 858 aa13.39□□□□□ -0.27
MRPL55-229ENST00000483159 ATAT1Q5SQI0 421 aa13.39□□□□□ -0.27
MRPL55-229ENST00000483159 C15orf39Q6ZRI6 1047 aa13.39□□□□□ -0.27
MRPL55-229ENST00000483159 RTL10Q7L3V2 364 aa13.39□□□□□ -0.27
MRPL55-229ENST00000483159 PALB2Q86YC2 1186 aa13.39□□□□□ -0.27
MRPL55-229ENST00000483159 NELFCDQ8IXH7 590 aa13.39□□□□□ -0.27
MRPL55-229ENST00000483159 ELOA2Q8IYF1 753 aaPredicted RBP13.39□□□□□ -0.27
MRPL55-229ENST00000483159 GJD3Q8N144 294 aa13.39□□□□□ -0.27
MRPL55-229ENST00000483159 CMASQ8NFW8 434 aaPredicted RBP13.39□□□□□ -0.27
MRPL55-229ENST00000483159 RIPOR3Q96MK2 946 aa13.39□□□□□ -0.27
MRPL55-229ENST00000483159 TIGD1Q96MW7 591 aa13.39□□□□□ -0.27
MRPL55-229ENST00000483159 NECAB3Q96P71 396 aaPredicted RBP13.39□□□□□ -0.27
MRPL55-229ENST00000483159 RHOBTB2Q9BYZ6 727 aa13.39□□□□□ -0.27
MRPL55-229ENST00000483159 DPP3Q9NY33 737 aa13.39□□□□□ -0.27
MRPL55-229ENST00000483159 HSPBP1Q9NZL4 362 aa13.39□□□□□ -0.27
MRPL55-229ENST00000483159 PCDHB8Q9UN66 801 aa13.39□□□□□ -0.27
MRPL55-229ENST00000483159 ARHGEF37A1IGU5 675 aa13.38□□□□□ -0.27
MRPL55-229ENST00000483159 GOLGA8IPA6NC78 632 aa13.38□□□□□ -0.27
MRPL55-229ENST00000483159 GOLGA8JA6NMD2 632 aa13.38□□□□□ -0.27
MRPL55-229ENST00000483159 I3L4J1 428 aa13.38□□□□□ -0.27
MRPL55-229ENST00000483159 RPL17P18621 184 aaKnown RBP13.38□□□□□ -0.27
MRPL55-229ENST00000483159 OR1D2P34982 312 aa13.38□□□□□ -0.27
MRPL55-229ENST00000483159 LILRA4P59901 499 aa13.38□□□□□ -0.27
MRPL55-229ENST00000483159 VARS2Q5ST30 1063 aaKnown RBP13.38□□□□□ -0.27
MRPL55-229ENST00000483159 C9orf57Q5W0N0 161 aa13.38□□□□□ -0.27
MRPL55-229ENST00000483159 SLC8B1Q6J4K2 584 aa13.38□□□□□ -0.27
MRPL55-229ENST00000483159 GPR149Q86SP6 731 aa13.38□□□□□ -0.27
MRPL55-229ENST00000483159 XXYLT1Q8NBI6 393 aa13.38□□□□□ -0.27
MRPL55-229ENST00000483159 KIAA0895Q8NCT3 520 aa13.38□□□□□ -0.27
MRPL55-229ENST00000483159 ZSWIM2Q8NEG5 633 aa13.38□□□□□ -0.27
MRPL55-229ENST00000483159 PHF7Q9BWX1 381 aaPredicted RBP13.38□□□□□ -0.27
MRPL55-229ENST00000483159 MAN1C1Q9NR34 630 aa13.38□□□□□ -0.27
MRPL55-229ENST00000483159 TSHZ2Q9NRE2 1034 aa13.38□□□□□ -0.27
MRPL55-229ENST00000483159 ZDHHC7Q9NXF8 308 aa13.38□□□□□ -0.27
MRPL55-229ENST00000483159 HOOK1Q9UJC3 728 aaKnown RBP13.38□□□□□ -0.27
MRPL55-229ENST00000483159 BRWD1Q9NSI6 2320 aa13.38□□□□□ -0.27
MRPL55-229ENST00000483159 SPTBN5Q9NRC6 3674 aaKnown RBP13.37□□□□□ -0.27
MRPL55-229ENST00000483159 SPDYE4A6NLX3 237 aa13.37□□□□□ -0.27
MRPL55-229ENST00000483159 PDXKO00764 312 aa13.37□□□□□ -0.27
MRPL55-229ENST00000483159 TBC1D4O60343 1298 aa13.37□□□□□ -0.27
MRPL55-229ENST00000483159 OAZ2O95190 189 aa13.37□□□□□ -0.27
MRPL55-229ENST00000483159 PRR29P0C7W0 189 aa13.37□□□□□ -0.27
MRPL55-229ENST00000483159 PNPLA4P41247 253 aa13.37□□□□□ -0.27
MRPL55-229ENST00000483159 TFAMQ00059 246 aaKnown RBP13.37□□□□□ -0.27
MRPL55-229ENST00000483159 MYBPC2Q14324 1141 aa13.37□□□□□ -0.27
MRPL55-229ENST00000483159 SNRNP35Q16560 246 aaKnown RBP13.37□□□□□ -0.27
MRPL55-229ENST00000483159 UVSSAQ2YD98 709 aa13.37□□□□□ -0.27
MRPL55-229ENST00000483159 RARS2Q5T160 578 aaKnown RBP13.37□□□□□ -0.27
MRPL55-229ENST00000483159 DSTYKQ6XUX3 929 aa13.37□□□□□ -0.27
MRPL55-229ENST00000483159 SLC9A9Q8IVB4 645 aa13.37□□□□□ -0.27
MRPL55-229ENST00000483159 EFCAB13Q8IY85 973 aa13.37□□□□□ -0.27
MRPL55-229ENST00000483159 C12orf76Q8N812 135 aaPredicted RBP13.37□□□□□ -0.27
MRPL55-229ENST00000483159 KREMEN2Q8NCW0 462 aa13.37□□□□□ -0.27
MRPL55-229ENST00000483159 GSDMAQ96QA5 445 aa13.37□□□□□ -0.27
MRPL55-229ENST00000483159 APOL5Q9BWW9 433 aa13.37□□□□□ -0.27
MRPL55-229ENST00000483159 GTPBP4Q9BZE4 634 aaKnown RBP13.37□□□□□ -0.27
MRPL55-229ENST00000483159 PDE11AQ9HCR9 933 aa13.37□□□□□ -0.27
MRPL55-229ENST00000483159 RMND1Q9NWS8 449 aa13.37□□□□□ -0.27
MRPL55-229ENST00000483159 MAFFQ9ULX9 164 aa13.37□□□□□ -0.27
MRPL55-229ENST00000483159 CDY1Q9Y6F8 540 aa13.37□□□□□ -0.27
MRPL55-229ENST00000483159 CCDC195A0A1B0GUA6 201 aa13.36□□□□□ -0.27
MRPL55-229ENST00000483159 LOC730098B7Z3J9 87 aa13.36□□□□□ -0.27
MRPL55-229ENST00000483159 PRPF40AO75400 957 aaKnown RBP13.36□□□□□ -0.27
MRPL55-229ENST00000483159 ZMYND10O75800 440 aa13.36□□□□□ -0.27
MRPL55-229ENST00000483159 SMC2O95347 1197 aa13.36□□□□□ -0.27
MRPL55-229ENST00000483159 SPATA31D3P0C874 917 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms