RNA–Protein interactions for RNA: ENST00000482878.5

CCDC78-213, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-213ENST00000482878 APBB1IPQ7Z5R6 666 aaPredicted RBP13.18□□□□□ -0.3
CCDC78-213ENST00000482878 APLFQ8IW19 511 aaPredicted RBP13.18□□□□□ -0.3
CCDC78-213ENST00000482878 ARHGEF2Q92974 986 aaKnown RBP13.18□□□□□ -0.3
CCDC78-213ENST00000482878 ZNF653Q96CK0 615 aa13.18□□□□□ -0.3
CCDC78-213ENST00000482878 MASTLQ96GX5 879 aa13.18□□□□□ -0.3
CCDC78-213ENST00000482878 HAO1Q9UJM8 370 aa13.18□□□□□ -0.3
CCDC78-213ENST00000482878 CYP1A2P05177 515 aa13.18□□□□□ -0.3
CCDC78-213ENST00000482878 GSTT1P30711 240 aa13.18□□□□□ -0.3
CCDC78-213ENST00000482878 STX2P32856 288 aa13.18□□□□□ -0.3
CCDC78-213ENST00000482878 ABCD1P33897 745 aa13.18□□□□□ -0.3
CCDC78-213ENST00000482878 CHKAP35790 457 aa13.18□□□□□ -0.3
CCDC78-213ENST00000482878 MXI1P50539 228 aa13.18□□□□□ -0.3
CCDC78-213ENST00000482878 CCNJLQ8IV13 435 aa13.18□□□□□ -0.3
CCDC78-213ENST00000482878 XXYLT1Q8NBI6 393 aa13.18□□□□□ -0.3
CCDC78-213ENST00000482878 SUPT20HQ8NEM7 779 aa13.18□□□□□ -0.3
CCDC78-213ENST00000482878 LRRC8CQ8TDW0 803 aa13.18□□□□□ -0.3
CCDC78-213ENST00000482878 MORC4Q8TE76 937 aa13.18□□□□□ -0.3
CCDC78-213ENST00000482878 SEMA4DQ92854 862 aa13.18□□□□□ -0.3
CCDC78-213ENST00000482878 RUNDC3BQ96NL0 473 aa13.18□□□□□ -0.3
CCDC78-213ENST00000482878 PLEKHG4BQ96PX9 1271 aa13.18□□□□□ -0.3
CCDC78-213ENST00000482878 MRIQ9BWK5 157 aa13.18□□□□□ -0.3
CCDC78-213ENST00000482878 LRRC19Q9H756 370 aa13.18□□□□□ -0.3
CCDC78-213ENST00000482878 TMEM206Q9H813 350 aa13.18□□□□□ -0.3
CCDC78-213ENST00000482878 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.18□□□□□ -0.3
CCDC78-213ENST00000482878 LARSQ9P2J5 1176 aaKnown RBP13.18□□□□□ -0.3
CCDC78-213ENST00000482878 CTNNAL1Q9UBT7 734 aa13.18□□□□□ -0.3
CCDC78-213ENST00000482878 ADRB2P07550 413 aa13.17□□□□□ -0.3
CCDC78-213ENST00000482878 UBTFL6P0CB48 400 aaPredicted RBP13.17□□□□□ -0.3
CCDC78-213ENST00000482878 TPBGLP0DKB5 382 aa13.17□□□□□ -0.3
CCDC78-213ENST00000482878 SKIP12755 728 aa13.17□□□□□ -0.3
CCDC78-213ENST00000482878 CALCOCO2Q13137 446 aa13.17□□□□□ -0.3
CCDC78-213ENST00000482878 DLGAP5Q15398 846 aa13.17□□□□□ -0.3
CCDC78-213ENST00000482878 C12orf50Q8NA57 414 aaPredicted RBP13.17□□□□□ -0.3
CCDC78-213ENST00000482878 MIPOL1Q8TD10 442 aa13.17□□□□□ -0.3
CCDC78-213ENST00000482878 PSPC1Q8WXF1 523 aaKnown RBP13.17□□□□□ -0.3
CCDC78-213ENST00000482878 ERP27Q96DN0 273 aa13.17□□□□□ -0.3
CCDC78-213ENST00000482878 PRMT6Q96LA8 375 aaPredicted RBP13.17□□□□□ -0.3
CCDC78-213ENST00000482878 PREBQ9HCU5 417 aa13.17□□□□□ -0.3
CCDC78-213ENST00000482878 METTL5Q9NRN9 209 aaKnown RBP13.17□□□□□ -0.3
CCDC78-213ENST00000482878 DNAJC17Q9NVM6 304 aaKnown RBP13.17□□□□□ -0.3
CCDC78-213ENST00000482878 TMEM120BA0PK00 339 aa13.17□□□□□ -0.3
CCDC78-213ENST00000482878 ABLIM1O14639 778 aa13.17□□□□□ -0.3
CCDC78-213ENST00000482878 PEX11AO75192 247 aa13.17□□□□□ -0.3
CCDC78-213ENST00000482878 ENTPD5O75356 428 aa13.17□□□□□ -0.3
CCDC78-213ENST00000482878 ZBTB7AO95365 584 aa13.17□□□□□ -0.3
CCDC78-213ENST00000482878 KRT17Q04695 432 aa13.17□□□□□ -0.3
CCDC78-213ENST00000482878 DEUP1Q05D60 604 aa13.17□□□□□ -0.3
CCDC78-213ENST00000482878 SGSM1Q2NKQ1 1148 aa13.17□□□□□ -0.3
CCDC78-213ENST00000482878 ZNF365Q70YC5 407 aa13.17□□□□□ -0.3
CCDC78-213ENST00000482878 OCEL1Q9H607 264 aa13.17□□□□□ -0.3
CCDC78-213ENST00000482878 TMEM150BA6NC51 233 aa13.16□□□□□ -0.3
CCDC78-213ENST00000482878 ZSCAN9O15535 394 aaPredicted RBP13.16□□□□□ -0.3
CCDC78-213ENST00000482878 ATP9AO75110 1047 aa13.16□□□□□ -0.3
CCDC78-213ENST00000482878 OAS1P00973 400 aaKnown RBP13.16□□□□□ -0.3
CCDC78-213ENST00000482878 CYP11B1P15538 503 aa13.16□□□□□ -0.3
CCDC78-213ENST00000482878 ITGB5P18084 799 aa13.16□□□□□ -0.3
CCDC78-213ENST00000482878 GALNTL6Q49A17 601 aa13.16□□□□□ -0.3
CCDC78-213ENST00000482878 STRIP1Q5VSL9 837 aa13.16□□□□□ -0.3
CCDC78-213ENST00000482878 VSTM1Q6UX27 236 aa13.16□□□□□ -0.3
CCDC78-213ENST00000482878 TRMT10CQ7L0Y3 403 aaKnown RBP13.16□□□□□ -0.3
CCDC78-213ENST00000482878 ATG4AQ8WYN0 398 aa13.16□□□□□ -0.3
CCDC78-213ENST00000482878 VTI1AQ96AJ9 217 aa13.16□□□□□ -0.3
CCDC78-213ENST00000482878 ACCSQ96QU6 501 aa13.16□□□□□ -0.3
CCDC78-213ENST00000482878 ROPN1BQ9BZX4 212 aaPredicted RBP13.16□□□□□ -0.3
CCDC78-213ENST00000482878 ROPN1Q9HAT0 212 aaPredicted RBP13.16□□□□□ -0.3
CCDC78-213ENST00000482878 CHST7Q9NS84 486 aa13.16□□□□□ -0.3
CCDC78-213ENST00000482878 CALCAP01258 141 aa13.16□□□□□ -0.3
CCDC78-213ENST00000482878 ZCCHC18P0CG32 403 aa13.16□□□□□ -0.3
CCDC78-213ENST00000482878 MAGEA8P43361 318 aa13.16□□□□□ -0.3
CCDC78-213ENST00000482878 CCNG1P51959 295 aa13.16□□□□□ -0.3
CCDC78-213ENST00000482878 TRIP13Q15645 432 aaPredicted RBP13.16□□□□□ -0.3
CCDC78-213ENST00000482878 PHC3Q8NDX5 983 aa13.16□□□□□ -0.3
CCDC78-213ENST00000482878 SHC3Q92529 594 aa13.16□□□□□ -0.3
CCDC78-213ENST00000482878 TGS1Q96RS0 853 aaKnown RBP13.16□□□□□ -0.3
CCDC78-213ENST00000482878 GTF3C4Q9UKN8 822 aa13.16□□□□□ -0.3
CCDC78-213ENST00000482878 NPM3O75607 178 aaKnown RBP13.16□□□□□ -0.3
CCDC78-213ENST00000482878 ACADSP16219 412 aa13.16□□□□□ -0.3
CCDC78-213ENST00000482878 GNAZP19086 355 aa13.16□□□□□ -0.3
CCDC78-213ENST00000482878 SGO2Q562F6 1265 aa13.16□□□□□ -0.3
CCDC78-213ENST00000482878 IRGCQ6NXR0 463 aa13.16□□□□□ -0.3
CCDC78-213ENST00000482878 RHBDF2Q6PJF5 856 aa13.16□□□□□ -0.3
CCDC78-213ENST00000482878 CBWD2Q8IUF1 395 aa13.16□□□□□ -0.3
CCDC78-213ENST00000482878 C12orf56Q8IXR9 622 aa13.16□□□□□ -0.3
CCDC78-213ENST00000482878 DDX50Q9BQ39 737 aaKnown RBP13.16□□□□□ -0.3
CCDC78-213ENST00000482878 HERPUD2Q9BSE4 406 aa13.16□□□□□ -0.3
CCDC78-213ENST00000482878 GPRC5CQ9NQ84 441 aa13.16□□□□□ -0.3
CCDC78-213ENST00000482878 ASIC3Q9UHC3 531 aa13.16□□□□□ -0.3
CCDC78-213ENST00000482878 FZD1Q9UP38 647 aa13.16□□□□□ -0.3
CCDC78-213ENST00000482878 ZHX2Q9Y6X8 837 aa13.16□□□□□ -0.3
CCDC78-213ENST00000482878 UNC5CO95185 931 aa13.15□□□□□ -0.3
CCDC78-213ENST00000482878 PLS3P13797 630 aa13.15□□□□□ -0.3
CCDC78-213ENST00000482878 ETS2P15036 469 aa13.15□□□□□ -0.3
CCDC78-213ENST00000482878 EPHB2P29323 1055 aa13.15□□□□□ -0.3
CCDC78-213ENST00000482878 MPP2Q14168 576 aa13.15□□□□□ -0.3
CCDC78-213ENST00000482878 MIER3Q7Z3K6 550 aa13.15□□□□□ -0.3
CCDC78-213ENST00000482878 HAUS6Q7Z4H7 955 aa13.15□□□□□ -0.3
CCDC78-213ENST00000482878 TRIM42Q8IWZ5 723 aa13.15□□□□□ -0.3
CCDC78-213ENST00000482878 RBBP8NLQ8NC74 664 aaPredicted RBP13.15□□□□□ -0.3
CCDC78-213ENST00000482878 PPFIBP2Q8ND30 876 aa13.15□□□□□ -0.3
CCDC78-213ENST00000482878 FAM13CQ8NE31 585 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms