RNA–Protein interactions for RNA: ENST00000482596.1

CHD6-209, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best)

Gene CHD6, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-209ENST00000482596 CDC37Q16543 378 aaPredicted RBP7.4□□□□□ -1.22
CHD6-209ENST00000482596 USP39Q53GS9 565 aaKnown RBP7.4□□□□□ -1.22
CHD6-209ENST00000482596 LIN9Q5TKA1 542 aa7.4□□□□□ -1.22
CHD6-209ENST00000482596 FOXD4L5Q5VV16 416 aaPredicted RBP7.4□□□□□ -1.22
CHD6-209ENST00000482596 PEAR1Q5VY43 1037 aaPredicted RBP7.4□□□□□ -1.22
CHD6-209ENST00000482596 FSTL4Q6MZW2 842 aa7.4□□□□□ -1.22
CHD6-209ENST00000482596 C1orf228Q6PIY5 440 aa7.4□□□□□ -1.22
CHD6-209ENST00000482596 PRSS55Q6UWB4 352 aaPredicted RBP7.4□□□□□ -1.22
CHD6-209ENST00000482596 DHRS13Q6UX07 377 aa7.4□□□□□ -1.22
CHD6-209ENST00000482596 ERICH1Q86X53 443 aa7.4□□□□□ -1.22
CHD6-209ENST00000482596 MFSD6LQ8IWD5 586 aa7.4□□□□□ -1.22
CHD6-209ENST00000482596 BAHD1Q8TBE0 780 aaPredicted RBP7.4□□□□□ -1.22
CHD6-209ENST00000482596 SETD7Q8WTS6 366 aaKnown RBP7.4□□□□□ -1.22
CHD6-209ENST00000482596 RLN3Q8WXF3 142 aa7.4□□□□□ -1.22
CHD6-209ENST00000482596 FOXD4L4Q8WXT5 416 aaPredicted RBP7.4□□□□□ -1.22
CHD6-209ENST00000482596 SSH1Q8WYL5 1049 aa7.4□□□□□ -1.22
CHD6-209ENST00000482596 TMEM176AQ96HP8 235 aa7.4□□□□□ -1.22
CHD6-209ENST00000482596 ZFYVE19Q96K21 471 aa7.4□□□□□ -1.22
CHD6-209ENST00000482596 ZNF668Q96K58 619 aaPredicted RBP7.4□□□□□ -1.22
CHD6-209ENST00000482596 INPP4AQ96PE3 977 aaPredicted RBP7.4□□□□□ -1.22
CHD6-209ENST00000482596 LGMNQ99538 433 aa7.4□□□□□ -1.22
CHD6-209ENST00000482596 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.4□□□□□ -1.22
CHD6-209ENST00000482596 UBA5Q9GZZ9 404 aa7.4□□□□□ -1.22
CHD6-209ENST00000482596 MAF1Q9H063 256 aa7.4□□□□□ -1.22
CHD6-209ENST00000482596 SMARCAD1Q9H4L7 1026 aa7.4□□□□□ -1.22
CHD6-209ENST00000482596 CHST7Q9NS84 486 aa7.4□□□□□ -1.22
CHD6-209ENST00000482596 FNIP2Q9P278 1114 aa7.4□□□□□ -1.22
CHD6-209ENST00000482596 HDAC5Q9UQL6 1122 aa7.4□□□□□ -1.22
CHD6-209ENST00000482596 WDR27A2RRH5 827 aa7.39□□□□□ -1.23
CHD6-209ENST00000482596 HEPACAM2A8MVW5 462 aa7.39□□□□□ -1.23
CHD6-209ENST00000482596 ATG13O75143 517 aa7.39□□□□□ -1.23
CHD6-209ENST00000482596 GOLGA8HP0CJ92 632 aa7.39□□□□□ -1.23
CHD6-209ENST00000482596 PDHBP11177 359 aa7.39□□□□□ -1.23
CHD6-209ENST00000482596 SNRPBP14678 240 aaKnown RBP7.39□□□□□ -1.23
CHD6-209ENST00000482596 CCR2P41597 374 aa7.39□□□□□ -1.23
CHD6-209ENST00000482596 ZNF543Q08ER8 600 aa7.39□□□□□ -1.23
CHD6-209ENST00000482596 DMC1Q14565 340 aa7.39□□□□□ -1.23
CHD6-209ENST00000482596 DUOXA1Q1HG43 343 aa7.39□□□□□ -1.23
CHD6-209ENST00000482596 GLB1LQ6UWU2 654 aa7.39□□□□□ -1.23
CHD6-209ENST00000482596 TRIM46Q7Z4K8 759 aa7.39□□□□□ -1.23
CHD6-209ENST00000482596 C11orf74Q86VG3 221 aa7.39□□□□□ -1.23
CHD6-209ENST00000482596 MMP21Q8N119 569 aa7.39□□□□□ -1.23
CHD6-209ENST00000482596 CCDC82Q8N4S0 544 aa7.39□□□□□ -1.23
CHD6-209ENST00000482596 DEPDC1BQ8WUY9 529 aa7.39□□□□□ -1.23
CHD6-209ENST00000482596 SEPT1Q8WYJ6 367 aa7.39□□□□□ -1.23
CHD6-209ENST00000482596 STRBPQ96SI9 672 aaKnown RBP7.39□□□□□ -1.23
CHD6-209ENST00000482596 KLF16Q9BXK1 252 aaPredicted RBP7.39□□□□□ -1.23
CHD6-209ENST00000482596 PRKRIP1Q9H875 184 aaPredicted RBP7.39□□□□□ -1.23
CHD6-209ENST00000482596 ZNF287Q9HBT7 754 aa7.39□□□□□ -1.23
CHD6-209ENST00000482596 STARD5Q9NSY2 213 aa7.39□□□□□ -1.23
CHD6-209ENST00000482596 APCP25054 2843 aa7.38□□□□□ -1.23
CHD6-209ENST00000482596 ADAM12O43184 909 aa7.38□□□□□ -1.23
CHD6-209ENST00000482596 FIBPO43427 364 aa7.38□□□□□ -1.23
CHD6-209ENST00000482596 BRINP1O60477 761 aa7.38□□□□□ -1.23
CHD6-209ENST00000482596 EGFP01133 1207 aa7.38□□□□□ -1.23
CHD6-209ENST00000482596 PHKA2P46019 1235 aa7.38□□□□□ -1.23
CHD6-209ENST00000482596 NOVP48745 357 aa7.38□□□□□ -1.23
CHD6-209ENST00000482596 TNK2Q07912 1038 aa7.38□□□□□ -1.23
CHD6-209ENST00000482596 QRICH1Q2TAL8 776 aa7.38□□□□□ -1.23
CHD6-209ENST00000482596 GNPTABQ3T906 1256 aa7.38□□□□□ -1.23
CHD6-209ENST00000482596 PRSS36Q5K4E3 855 aa7.38□□□□□ -1.23
CHD6-209ENST00000482596 AXDND1Q5T1B0 1012 aaPredicted RBP7.38□□□□□ -1.23
CHD6-209ENST00000482596 C6orf118Q5T5N4 469 aa7.38□□□□□ -1.23
CHD6-209ENST00000482596 LYSMD4Q5XG99 296 aa7.38□□□□□ -1.23
CHD6-209ENST00000482596 LPCAT2Q7L5N7 544 aa7.38□□□□□ -1.23
CHD6-209ENST00000482596 DEFB119Q8N690 84 aa7.38□□□□□ -1.23
CHD6-209ENST00000482596 RPLP0P6Q8NHW5 317 aa7.38□□□□□ -1.23
CHD6-209ENST00000482596 SMARCD2Q92925 531 aa7.38□□□□□ -1.23
CHD6-209ENST00000482596 TMEM209Q96SK2 561 aa7.38□□□□□ -1.23
CHD6-209ENST00000482596 GAD1Q99259 594 aa7.38□□□□□ -1.23
CHD6-209ENST00000482596 TMEM47Q9BQJ4 181 aa7.38□□□□□ -1.23
CHD6-209ENST00000482596 CLSTN3Q9BQT9 956 aa7.38□□□□□ -1.23
CHD6-209ENST00000482596 GPR62Q9BZJ7 368 aa7.38□□□□□ -1.23
CHD6-209ENST00000482596 FBRSL1Q9HCM7 1045 aaKnown RBP7.38□□□□□ -1.23
CHD6-209ENST00000482596 MRPL11Q9Y3B7 192 aaKnown RBP7.38□□□□□ -1.23
CHD6-209ENST00000482596 PLXND1Q9Y4D7 1925 aa7.38□□□□□ -1.23
CHD6-209ENST00000482596 HIVEP3Q5T1R4 2406 aa7.37□□□□□ -1.23
CHD6-209ENST00000482596 TSPY2A6NKD2 308 aa7.37□□□□□ -1.23
CHD6-209ENST00000482596 CHADO15335 359 aa7.37□□□□□ -1.23
CHD6-209ENST00000482596 CSDE1O75534 798 aaKnown RBP7.37□□□□□ -1.23
CHD6-209ENST00000482596 POMCP01189 267 aa7.37□□□□□ -1.23
CHD6-209ENST00000482596 ITGB6P18564 788 aa7.37□□□□□ -1.23
CHD6-209ENST00000482596 OR1G1P47890 313 aa7.37□□□□□ -1.23
CHD6-209ENST00000482596 TDO2P48775 406 aa7.37□□□□□ -1.23
CHD6-209ENST00000482596 GHRHRQ02643 423 aa7.37□□□□□ -1.23
CHD6-209ENST00000482596 VAC14Q08AM6 782 aa7.37□□□□□ -1.23
CHD6-209ENST00000482596 RTP5Q14D33 572 aa7.37□□□□□ -1.23
CHD6-209ENST00000482596 TMEM196Q5HYL7 178 aa7.37□□□□□ -1.23
CHD6-209ENST00000482596 BROXQ5VW32 411 aa7.37□□□□□ -1.23
CHD6-209ENST00000482596 ANO7Q6IWH7 933 aa7.37□□□□□ -1.23
CHD6-209ENST00000482596 MRPL14Q6P1L8 145 aaKnown RBP7.37□□□□□ -1.23
CHD6-209ENST00000482596 SYT13Q7L8C5 426 aa7.37□□□□□ -1.23
CHD6-209ENST00000482596 FCHSD1Q86WN1 690 aa7.37□□□□□ -1.23
CHD6-209ENST00000482596 WDR63Q8IWG1 891 aa7.37□□□□□ -1.23
CHD6-209ENST00000482596 SNRNP27Q8WVK2 155 aaKnown RBP7.37□□□□□ -1.23
CHD6-209ENST00000482596 ITPKCQ96DU7 683 aa7.37□□□□□ -1.23
CHD6-209ENST00000482596 CHFRQ96EP1 664 aa7.37□□□□□ -1.23
CHD6-209ENST00000482596 LRRC3BQ96PB8 259 aa7.37□□□□□ -1.23
CHD6-209ENST00000482596 SENP7Q9BQF6 1050 aa7.37□□□□□ -1.23
CHD6-209ENST00000482596 OCSTAMPQ9BR26 566 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms