RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 EXOSC6Q5RKV6 272 aaKnown RBP8.42□□□□□ -1.06
SNX13-208ENST00000482558 TOGARAM2Q6ZUX3 1019 aa8.42□□□□□ -1.06
SNX13-208ENST00000482558 KCTD1Q719H9 257 aa8.42□□□□□ -1.06
SNX13-208ENST00000482558 MYOCDQ8IZQ8 938 aa8.42□□□□□ -1.06
SNX13-208ENST00000482558 SHISA5Q8N114 240 aa8.42□□□□□ -1.06
SNX13-208ENST00000482558 STK35Q8TDR2 534 aa8.42□□□□□ -1.06
SNX13-208ENST00000482558 CNOT6LQ96LI5 555 aaKnown RBP8.42□□□□□ -1.06
SNX13-208ENST00000482558 HERPUD2Q9BSE4 406 aa8.42□□□□□ -1.06
SNX13-208ENST00000482558 YIPF4Q9BSR8 244 aa8.42□□□□□ -1.06
SNX13-208ENST00000482558 MXD3Q9BW11 206 aa8.42□□□□□ -1.06
SNX13-208ENST00000482558 TARS2Q9BW92 718 aaKnown RBP8.42□□□□□ -1.06
SNX13-208ENST00000482558 SPATA9Q9BWV2 254 aa8.42□□□□□ -1.06
SNX13-208ENST00000482558 CPVLQ9H3G5 476 aa8.42□□□□□ -1.06
SNX13-208ENST00000482558 DNAJC18Q9H819 358 aa8.42□□□□□ -1.06
SNX13-208ENST00000482558 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.42□□□□□ -1.06
SNX13-208ENST00000482558 LUC7LQ9NQ29 371 aaKnown RBP8.42□□□□□ -1.06
SNX13-208ENST00000482558 OGFRQ9NZT2 677 aa8.42□□□□□ -1.06
SNX13-208ENST00000482558 FAM184BQ9ULE4 1060 aa8.42□□□□□ -1.06
SNX13-208ENST00000482558 TMX2Q9Y320 296 aa8.42□□□□□ -1.06
SNX13-208ENST00000482558 EPN1Q9Y6I3 576 aaPredicted RBP8.42□□□□□ -1.06
SNX13-208ENST00000482558 TNS1Q9HBL0 1735 aaKnown RBP8.42□□□□□ -1.06
SNX13-208ENST00000482558 PSME4Q14997 1843 aa8.42□□□□□ -1.06
SNX13-208ENST00000482558 MYMKA6NI61 221 aa8.41□□□□□ -1.06
SNX13-208ENST00000482558 VSTM5A8MXK1 200 aa8.41□□□□□ -1.06
SNX13-208ENST00000482558 PES1O00541 588 aaKnown RBP8.41□□□□□ -1.06
SNX13-208ENST00000482558 KRT86O43790 486 aa8.41□□□□□ -1.06
SNX13-208ENST00000482558 PPP1R11O60927 126 aaPredicted RBP8.41□□□□□ -1.06
SNX13-208ENST00000482558 ZRANB2O95218 330 aaKnown RBP eCLIP8.41□□□□□ -1.06
SNX13-208ENST00000482558 NDUFB10O96000 172 aa8.41□□□□□ -1.06
SNX13-208ENST00000482558 GSTP1P09211 210 aaKnown RBP8.41□□□□□ -1.06
SNX13-208ENST00000482558 VDRP11473 427 aa8.41□□□□□ -1.06
SNX13-208ENST00000482558 RPA1P27694 616 aa8.41□□□□□ -1.06
SNX13-208ENST00000482558 HNRNPH3P31942 346 aaKnown RBP8.41□□□□□ -1.06
SNX13-208ENST00000482558 ADMP35318 185 aa8.41□□□□□ -1.06
SNX13-208ENST00000482558 FXR1P51114 621 aaKnown RBP eCLIP8.41□□□□□ -1.06
SNX13-208ENST00000482558 STAT2P52630 851 aa8.41□□□□□ -1.06
SNX13-208ENST00000482558 TCP10Q12799 353 aa8.41□□□□□ -1.06
SNX13-208ENST00000482558 STK4Q13043 487 aa8.41□□□□□ -1.06
SNX13-208ENST00000482558 IKQ13123 557 aaPredicted RBP8.41□□□□□ -1.06
SNX13-208ENST00000482558 CBX2Q14781 532 aaPredicted RBP8.41□□□□□ -1.06
SNX13-208ENST00000482558 AOC3Q16853 763 aa8.41□□□□□ -1.06
SNX13-208ENST00000482558 WHAMMP3Q1A5X7 153 aa8.41□□□□□ -1.06
SNX13-208ENST00000482558 EDRF1Q3B7T1 1238 aa8.41□□□□□ -1.06
SNX13-208ENST00000482558 VWA3BQ502W6 1294 aa8.41□□□□□ -1.06
SNX13-208ENST00000482558 FAM26FQ5R3K3 315 aa8.41□□□□□ -1.06
SNX13-208ENST00000482558 RASIP1Q5U651 963 aa8.41□□□□□ -1.06
SNX13-208ENST00000482558 MAP1SQ66K74 1059 aaPredicted RBP8.41□□□□□ -1.06
SNX13-208ENST00000482558 ANKRD40Q6AI12 368 aa8.41□□□□□ -1.06
SNX13-208ENST00000482558 ZNF354CQ86Y25 554 aa8.41□□□□□ -1.06
SNX13-208ENST00000482558 FAM178BQ8IXR5 827 aa8.41□□□□□ -1.06
SNX13-208ENST00000482558 C2CD4AQ8NCU7 369 aaPredicted RBP8.41□□□□□ -1.06
SNX13-208ENST00000482558 FBLIM1Q8WUP2 373 aa8.41□□□□□ -1.06
SNX13-208ENST00000482558 SNRNP27Q8WVK2 155 aaKnown RBP8.41□□□□□ -1.06
SNX13-208ENST00000482558 CRYGNQ8WXF5 182 aa8.41□□□□□ -1.06
SNX13-208ENST00000482558 JPH3Q8WXH2 748 aaPredicted RBP8.41□□□□□ -1.06
SNX13-208ENST00000482558 RABGGTAQ92696 567 aa8.41□□□□□ -1.06
SNX13-208ENST00000482558 SYN2Q92777 582 aaPredicted RBP8.41□□□□□ -1.06
SNX13-208ENST00000482558 HAS1Q92839 578 aa8.41□□□□□ -1.06
SNX13-208ENST00000482558 RPGRIP1Q96KN7 1286 aa8.41□□□□□ -1.06
SNX13-208ENST00000482558 ELAC2Q9BQ52 826 aaKnown RBP8.41□□□□□ -1.06
SNX13-208ENST00000482558 POLR3CQ9BUI4 534 aaPredicted RBP8.41□□□□□ -1.06
SNX13-208ENST00000482558 SELENOOQ9BVL4 669 aa8.41□□□□□ -1.06
SNX13-208ENST00000482558 DEFB129Q9H1M3 183 aa8.41□□□□□ -1.06
SNX13-208ENST00000482558 FBRSQ9HAH7 460 aa8.41□□□□□ -1.06
SNX13-208ENST00000482558 KCND2Q9NZV8 630 aa8.41□□□□□ -1.06
SNX13-208ENST00000482558 ZNRF3Q9ULT6 936 aa8.41□□□□□ -1.06
SNX13-208ENST00000482558 DNM3Q9UQ16 869 aa8.41□□□□□ -1.06
SNX13-208ENST00000482558 MRPL11Q9Y3B7 192 aaKnown RBP8.41□□□□□ -1.06
SNX13-208ENST00000482558 MRFAP1Q9Y605 127 aa8.41□□□□□ -1.06
SNX13-208ENST00000482558 SLX4Q8IY92 1834 aa8.4□□□□□ -1.06
SNX13-208ENST00000482558 TTC26A0AVF1 554 aa8.4□□□□□ -1.06
SNX13-208ENST00000482558 ANO9A1A5B4 782 aa8.4□□□□□ -1.06
SNX13-208ENST00000482558 FRMD3A2A2Y4 597 aa8.4□□□□□ -1.06
SNX13-208ENST00000482558 EIF3CLB5ME19 914 aaKnown RBP8.4□□□□□ -1.06
SNX13-208ENST00000482558 PRRT4C9JH25 899 aa8.4□□□□□ -1.06
SNX13-208ENST00000482558 MEIS2O14770 477 aa8.4□□□□□ -1.06
SNX13-208ENST00000482558 USO1O60763 962 aaKnown RBP8.4□□□□□ -1.06
SNX13-208ENST00000482558 RNASEH2AO75792 299 aaKnown RBP8.4□□□□□ -1.06
SNX13-208ENST00000482558 NDUFA10O95299 355 aa8.4□□□□□ -1.06
SNX13-208ENST00000482558 PAPLNO95428 1278 aa8.4□□□□□ -1.06
SNX13-208ENST00000482558 GH2P01242 217 aa8.4□□□□□ -1.06
SNX13-208ENST00000482558 PLA2G4BP0C869 781 aa8.4□□□□□ -1.06
SNX13-208ENST00000482558 IDEP14735 1019 aa8.4□□□□□ -1.06
SNX13-208ENST00000482558 ZSCAN20P17040 1043 aaPredicted RBP8.4□□□□□ -1.06
SNX13-208ENST00000482558 GAP43P17677 238 aa8.4□□□□□ -1.06
SNX13-208ENST00000482558 MCM3P25205 808 aa8.4□□□□□ -1.06
SNX13-208ENST00000482558 SLC16A2P36021 539 aa8.4□□□□□ -1.06
SNX13-208ENST00000482558 CYP27A1Q02318 531 aa8.4□□□□□ -1.06
SNX13-208ENST00000482558 TNFAIP1Q13829 316 aa8.4□□□□□ -1.06
SNX13-208ENST00000482558 POU4F3Q15319 338 aa8.4□□□□□ -1.06
SNX13-208ENST00000482558 SPA17Q15506 151 aa8.4□□□□□ -1.06
SNX13-208ENST00000482558 UBE2SQ16763 222 aa8.4□□□□□ -1.06
SNX13-208ENST00000482558 FNDC3BQ53EP0 1204 aaKnown RBP8.4□□□□□ -1.06
SNX13-208ENST00000482558 LCE4AQ5TA78 99 aa8.4□□□□□ -1.06
SNX13-208ENST00000482558 IQCEQ6IPM2 695 aa8.4□□□□□ -1.06
SNX13-208ENST00000482558 CDPF1Q6NVV7 123 aa8.4□□□□□ -1.06
SNX13-208ENST00000482558 C6orf15Q6UXA7 325 aaPredicted RBP8.4□□□□□ -1.06
SNX13-208ENST00000482558 RAD9BQ6WBX8 426 aa8.4□□□□□ -1.06
SNX13-208ENST00000482558 STXBP4Q6ZWJ1 553 aa8.4□□□□□ -1.06
SNX13-208ENST00000482558 EEPD1Q7L9B9 569 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms