RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 VIMP08670 466 aaKnown RBP15.85■□□□□ 0.13
ATG4B-220ENST00000482507 TRMT10CQ7L0Y3 403 aaKnown RBP15.85■□□□□ 0.13
ATG4B-220ENST00000482507 ANKS1BQ7Z6G8 1248 aa15.85■□□□□ 0.13
ATG4B-220ENST00000482507 MGARPQ8TDB4 240 aa15.85■□□□□ 0.13
ATG4B-220ENST00000482507 FAM213AQ9BRX8 229 aa15.85■□□□□ 0.13
ATG4B-220ENST00000482507 PXMP2Q9NR77 195 aa15.85■□□□□ 0.13
ATG4B-220ENST00000482507 PHIPQ8WWQ0 1821 aa15.84■□□□□ 0.13
ATG4B-220ENST00000482507 CYP2C8P10632 490 aa15.84■□□□□ 0.13
ATG4B-220ENST00000482507 JAK3P52333 1124 aa15.84■□□□□ 0.13
ATG4B-220ENST00000482507 ITGA8P53708 1063 aa15.84■□□□□ 0.13
ATG4B-220ENST00000482507 MPP2Q14168 576 aa15.84■□□□□ 0.13
ATG4B-220ENST00000482507 KYNUQ16719 465 aa15.84■□□□□ 0.13
ATG4B-220ENST00000482507 PARP9Q8IXQ6 854 aa15.84■□□□□ 0.13
ATG4B-220ENST00000482507 KIFAP3Q92845 792 aa15.84■□□□□ 0.13
ATG4B-220ENST00000482507 SGSM3Q96HU1 749 aa15.84■□□□□ 0.13
ATG4B-220ENST00000482507 NTPCRQ9BSD7 190 aaKnown RBP15.84■□□□□ 0.13
ATG4B-220ENST00000482507 HEMGNQ9BXL5 484 aa15.84■□□□□ 0.13
ATG4B-220ENST00000482507 DCLK3Q9C098 648 aa15.84■□□□□ 0.13
ATG4B-220ENST00000482507 R3HDMLQ9H3Y0 253 aa15.84■□□□□ 0.13
ATG4B-220ENST00000482507 DNAJC8O75937 253 aaPredicted RBP15.84■□□□□ 0.13
ATG4B-220ENST00000482507 CETPP11597 493 aa15.84■□□□□ 0.13
ATG4B-220ENST00000482507 SSTR3P32745 418 aaPredicted RBP15.84■□□□□ 0.13
ATG4B-220ENST00000482507 VPS41P49754 854 aa15.84■□□□□ 0.13
ATG4B-220ENST00000482507 GCNT1Q02742 428 aa15.84■□□□□ 0.13
ATG4B-220ENST00000482507 GRM1Q13255 1194 aa15.84■□□□□ 0.13
ATG4B-220ENST00000482507 PTK6Q13882 451 aa15.84■□□□□ 0.13
ATG4B-220ENST00000482507 ITIH4Q14624 930 aa15.84■□□□□ 0.13
ATG4B-220ENST00000482507 C15orf39Q6ZRI6 1047 aa15.84■□□□□ 0.13
ATG4B-220ENST00000482507 P3H4Q92791 437 aa15.84■□□□□ 0.13
ATG4B-220ENST00000482507 ARHGEF2Q92974 986 aaKnown RBP15.84■□□□□ 0.13
ATG4B-220ENST00000482507 ROPN1BQ9BZX4 212 aaPredicted RBP15.84■□□□□ 0.13
ATG4B-220ENST00000482507 ASCC2Q9H1I8 757 aaPredicted RBP15.84■□□□□ 0.13
ATG4B-220ENST00000482507 ROPN1Q9HAT0 212 aaPredicted RBP15.84■□□□□ 0.13
ATG4B-220ENST00000482507 MLXIPLQ9NP71 852 aa15.84■□□□□ 0.13
ATG4B-220ENST00000482507 XPNPEP1Q9NQW7 623 aa15.84■□□□□ 0.13
ATG4B-220ENST00000482507 ABCF3Q9NUQ8 709 aa15.84■□□□□ 0.13
ATG4B-220ENST00000482507 HOXC10Q9NYD6 342 aa15.84■□□□□ 0.13
ATG4B-220ENST00000482507 TPX2Q9ULW0 747 aaKnown RBP15.84■□□□□ 0.13
ATG4B-220ENST00000482507 NEU2Q9Y3R4 380 aa15.84■□□□□ 0.13
ATG4B-220ENST00000482507 FKBP1BP68106 108 aa15.83■□□□□ 0.12
ATG4B-220ENST00000482507 KRT76Q01546 638 aa15.83■□□□□ 0.12
ATG4B-220ENST00000482507 SNAPC2Q13487 334 aa15.83■□□□□ 0.12
ATG4B-220ENST00000482507 SNRNP48Q6IEG0 339 aaKnown RBP15.83■□□□□ 0.12
ATG4B-220ENST00000482507 SPOPLQ6IQ16 392 aa15.83■□□□□ 0.12
ATG4B-220ENST00000482507 GPAT2Q6NUI2 795 aa15.83■□□□□ 0.12
ATG4B-220ENST00000482507 CROCCP2Q86T23 111 aa15.83■□□□□ 0.12
ATG4B-220ENST00000482507 PRUNE1Q86TP1 453 aa15.83■□□□□ 0.12
ATG4B-220ENST00000482507 CYP4X1Q8N118 509 aa15.83■□□□□ 0.12
ATG4B-220ENST00000482507 SPIRE2Q8WWL2 714 aa15.83■□□□□ 0.12
ATG4B-220ENST00000482507 MS4A4AQ96JQ5 239 aa15.83■□□□□ 0.12
ATG4B-220ENST00000482507 CEP170P1Q96L14 293 aa15.83■□□□□ 0.12
ATG4B-220ENST00000482507 MOV10L1Q9BXT6 1211 aaKnown RBP15.83■□□□□ 0.12
ATG4B-220ENST00000482507 GABBR1Q9UBS5 961 aa15.83■□□□□ 0.12
ATG4B-220ENST00000482507 ZNF214Q9UL59 606 aaPredicted RBP15.83■□□□□ 0.12
ATG4B-220ENST00000482507 SLC12A4Q9UP95 1085 aa15.83■□□□□ 0.12
ATG4B-220ENST00000482507 UMODL1Q5DID0 1318 aa15.83■□□□□ 0.12
ATG4B-220ENST00000482507 TMEM120BA0PK00 339 aa15.83■□□□□ 0.12
ATG4B-220ENST00000482507 HNRNPDLO14979 420 aaKnown RBP15.83■□□□□ 0.12
ATG4B-220ENST00000482507 CHUKO15111 745 aa15.83■□□□□ 0.12
ATG4B-220ENST00000482507 ITIH2P19823 946 aa15.83■□□□□ 0.12
ATG4B-220ENST00000482507 SFNP31947 248 aa15.83■□□□□ 0.12
ATG4B-220ENST00000482507 GTF2H1P32780 548 aa15.83■□□□□ 0.12
ATG4B-220ENST00000482507 ZNF157P51786 506 aaPredicted RBP15.83■□□□□ 0.12
ATG4B-220ENST00000482507 IRX3P78415 501 aaPredicted RBP15.83■□□□□ 0.12
ATG4B-220ENST00000482507 SAPCD2Q86UD0 394 aa15.83■□□□□ 0.12
ATG4B-220ENST00000482507 GPD1LQ8N335 351 aa15.83■□□□□ 0.12
ATG4B-220ENST00000482507 SLC17A8Q8NDX2 589 aa15.83■□□□□ 0.12
ATG4B-220ENST00000482507 REPS2Q8NFH8 660 aa15.83■□□□□ 0.12
ATG4B-220ENST00000482507 SNF8Q96H20 258 aa15.83■□□□□ 0.12
ATG4B-220ENST00000482507 A1CFQ9NQ94 594 aaKnown RBP15.83■□□□□ 0.12
ATG4B-220ENST00000482507 AVENQ9NQS1 362 aaPredicted RBP15.83■□□□□ 0.12
ATG4B-220ENST00000482507 BTBD7Q9P203 1132 aa15.83■□□□□ 0.12
ATG4B-220ENST00000482507 GGT7Q9UJ14 662 aa15.83■□□□□ 0.12
ATG4B-220ENST00000482507 ADAMTS5Q9UNA0 930 aa15.83■□□□□ 0.12
ATG4B-220ENST00000482507 PTPRJQ12913 1337 aa15.83■□□□□ 0.12
ATG4B-220ENST00000482507 TTC4O95801 387 aa15.82■□□□□ 0.12
ATG4B-220ENST00000482507 OAS1P00973 400 aaKnown RBP15.82■□□□□ 0.12
ATG4B-220ENST00000482507 GH1P01241 217 aa15.82■□□□□ 0.12
ATG4B-220ENST00000482507 TAS2R40P59535 323 aa15.82■□□□□ 0.12
ATG4B-220ENST00000482507 KLF1Q13351 362 aaPredicted RBP15.82■□□□□ 0.12
ATG4B-220ENST00000482507 SCARA3Q6AZY7 606 aa15.82■□□□□ 0.12
ATG4B-220ENST00000482507 SAMD3Q8N6K7 520 aa15.82■□□□□ 0.12
ATG4B-220ENST00000482507 STMN4Q9H169 189 aaPredicted RBP15.82■□□□□ 0.12
ATG4B-220ENST00000482507 PDLIM7Q9NR12 457 aa15.82■□□□□ 0.12
ATG4B-220ENST00000482507 TCEAL9Q9UHQ7 104 aa15.82■□□□□ 0.12
ATG4B-220ENST00000482507 AGAP1Q9UPQ3 857 aa15.82■□□□□ 0.12
ATG4B-220ENST00000482507 AGTPBP1Q9UPW5 1226 aa15.82■□□□□ 0.12
ATG4B-220ENST00000482507 CCL15-CCL14A0A0B4J2E2 113 aa15.82■□□□□ 0.12
ATG4B-220ENST00000482507 SNX3O60493 162 aa15.82■□□□□ 0.12
ATG4B-220ENST00000482507 SORBS3O60504 671 aa15.82■□□□□ 0.12
ATG4B-220ENST00000482507 RALAP11233 206 aa15.82■□□□□ 0.12
ATG4B-220ENST00000482507 CCL15Q16663 113 aa15.82■□□□□ 0.12
ATG4B-220ENST00000482507 FAM133BQ5BKY9 247 aaKnown RBP15.82■□□□□ 0.12
ATG4B-220ENST00000482507 ARHGEF16Q5VV41 709 aa15.82■□□□□ 0.12
ATG4B-220ENST00000482507 SPRYD7Q5W111 196 aa15.82■□□□□ 0.12
ATG4B-220ENST00000482507 MON1BQ7L1V2 547 aa15.82■□□□□ 0.12
ATG4B-220ENST00000482507 TAOK1Q7L7X3 1001 aa15.82■□□□□ 0.12
ATG4B-220ENST00000482507 ANKS4BQ8N8V4 417 aa15.82■□□□□ 0.12
ATG4B-220ENST00000482507 BRI3BPQ8WY22 251 aa15.82■□□□□ 0.12
ATG4B-220ENST00000482507 SERPINB12Q96P63 405 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms