RNA–Protein interactions for RNA: ENST00000481812.4

VPS16-207, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 943 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-207ENST00000481812 SPOUT1Q5T280 376 aaKnown RBP22.34■■□□□ 1.17
VPS16-207ENST00000481812 COLGALT1Q8NBJ5 622 aa22.34■■□□□ 1.17
VPS16-207ENST00000481812 FBXL13Q8NEE6 735 aa22.34■■□□□ 1.17
VPS16-207ENST00000481812 TAF4BQ92750 862 aa22.34■■□□□ 1.17
VPS16-207ENST00000481812 VRTNQ9H8Y1 702 aa22.34■■□□□ 1.17
VPS16-207ENST00000481812 TAB2Q9NYJ8 693 aa22.34■■□□□ 1.17
VPS16-207ENST00000481812 HCSTQ9UBK5 93 aa22.34■■□□□ 1.17
VPS16-207ENST00000481812 AGAP1Q9UPQ3 857 aa22.34■■□□□ 1.17
VPS16-207ENST00000481812 COLQQ9Y215 455 aaPredicted RBP22.34■■□□□ 1.17
VPS16-207ENST00000481812 R3HCC1Q9Y3T6 440 aaKnown RBP22.34■■□□□ 1.17
VPS16-207ENST00000481812 VNN1O95497 513 aa22.33■■□□□ 1.17
VPS16-207ENST00000481812 CST3P01034 146 aaPredicted RBP22.33■■□□□ 1.17
VPS16-207ENST00000481812 POLR2BP30876 1174 aaKnown RBP22.33■■□□□ 1.17
VPS16-207ENST00000481812 PPM1AP35813 382 aa22.33■■□□□ 1.17
VPS16-207ENST00000481812 MYL7Q01449 175 aa22.33■■□□□ 1.17
VPS16-207ENST00000481812 TRPC3Q13507 836 aa22.33■■□□□ 1.17
VPS16-207ENST00000481812 NCOA4Q13772 614 aa22.33■■□□□ 1.17
VPS16-207ENST00000481812 UVSSAQ2YD98 709 aa22.33■■□□□ 1.17
VPS16-207ENST00000481812 ZNF560Q96MR9 790 aa22.33■■□□□ 1.17
VPS16-207ENST00000481812 PAAF1Q9BRP4 392 aa22.33■■□□□ 1.17
VPS16-207ENST00000481812 PLVAPQ9BX97 442 aa22.33■■□□□ 1.17
VPS16-207ENST00000481812 VPS16Q9H269 839 aa22.33■■□□□ 1.17
VPS16-207ENST00000481812 YBX2Q9Y2T7 364 aaKnown RBP22.33■■□□□ 1.17
VPS16-207ENST00000481812 PCDHB12Q9Y5F1 795 aa22.33■■□□□ 1.17
VPS16-207ENST00000481812 LGALS16A8MUM7 142 aa22.32■■□□□ 1.16
VPS16-207ENST00000481812 HLA-DRAP01903 254 aa22.32■■□□□ 1.16
VPS16-207ENST00000481812 RB1P06400 928 aa22.32■■□□□ 1.16
VPS16-207ENST00000481812 CA3P07451 260 aa22.32■■□□□ 1.16
VPS16-207ENST00000481812 MYOGP15173 224 aa22.32■■□□□ 1.16
VPS16-207ENST00000481812 BMPR1AP36894 532 aa22.32■■□□□ 1.16
VPS16-207ENST00000481812 AARSP49588 968 aaKnown RBP eCLIP22.32■■□□□ 1.16
VPS16-207ENST00000481812 FANCCQ00597 558 aa22.32■■□□□ 1.16
VPS16-207ENST00000481812 SGSM1Q2NKQ1 1148 aa22.32■■□□□ 1.16
VPS16-207ENST00000481812 FILIP1LQ4L180 1135 aa22.32■■□□□ 1.16
VPS16-207ENST00000481812 EPC2Q52LR7 807 aa22.32■■□□□ 1.16
VPS16-207ENST00000481812 SLC39A11Q8N1S5 342 aa22.32■■□□□ 1.16
VPS16-207ENST00000481812 FAXDC2Q96IV6 333 aa22.32■■□□□ 1.16
VPS16-207ENST00000481812 FAM84AQ96KN4 292 aa22.32■■□□□ 1.16
VPS16-207ENST00000481812 MMRN2Q9H8L6 949 aa22.32■■□□□ 1.16
VPS16-207ENST00000481812 RAB20Q9NX57 234 aa22.32■■□□□ 1.16
VPS16-207ENST00000481812 STK39Q9UEW8 545 aa22.32■■□□□ 1.16
VPS16-207ENST00000481812 C5orf67F2Z3F1 127 aa22.31■■□□□ 1.16
VPS16-207ENST00000481812 B3GAT3O94766 335 aa22.31■■□□□ 1.16
VPS16-207ENST00000481812 KRT19P08727 400 aa22.31■■□□□ 1.16
VPS16-207ENST00000481812 PBX2P40425 430 aa22.31■■□□□ 1.16
VPS16-207ENST00000481812 PIK3CAP42336 1068 aa22.31■■□□□ 1.16
VPS16-207ENST00000481812 TAF6P49848 677 aa22.31■■□□□ 1.16
VPS16-207ENST00000481812 LILRA4P59901 499 aa22.31■■□□□ 1.16
VPS16-207ENST00000481812 ERVK-21P61565 698 aa22.31■■□□□ 1.16
VPS16-207ENST00000481812 MYO1EQ12965 1108 aa22.31■■□□□ 1.16
VPS16-207ENST00000481812 SV2CQ496J9 727 aa22.31■■□□□ 1.16
VPS16-207ENST00000481812 CD300LGQ6UXG3 332 aa22.31■■□□□ 1.16
VPS16-207ENST00000481812 TAS1R2Q8TE23 839 aa22.31■■□□□ 1.16
VPS16-207ENST00000481812 TGS1Q96RS0 853 aaKnown RBP22.31■■□□□ 1.16
VPS16-207ENST00000481812 XYLT2Q9H1B5 865 aa22.31■■□□□ 1.16
VPS16-207ENST00000481812 RTN4Q9NQC3 1192 aaKnown RBP22.31■■□□□ 1.16
VPS16-207ENST00000481812 SPG21Q9NZD8 308 aa22.31■■□□□ 1.16
VPS16-207ENST00000481812 ADAM28Q9UKQ2 775 aa22.31■■□□□ 1.16
VPS16-207ENST00000481812 LAMA2P24043 3122 aaKnown RBP22.31■■□□□ 1.16
VPS16-207ENST00000481812 A0A1B0GTH6 734 aa22.3■■□□□ 1.16
VPS16-207ENST00000481812 PPEF2O14830 753 aa22.3■■□□□ 1.16
VPS16-207ENST00000481812 ASS1P00966 412 aaKnown RBP22.3■■□□□ 1.16
VPS16-207ENST00000481812 SERPINC1P01008 464 aa22.3■■□□□ 1.16
VPS16-207ENST00000481812 TAP1Q03518 808 aa22.3■■□□□ 1.16
VPS16-207ENST00000481812 ELAVL2Q12926 359 aaKnown RBP22.3■■□□□ 1.16
VPS16-207ENST00000481812 FKBP15Q5T1M5 1219 aa22.3■■□□□ 1.16
VPS16-207ENST00000481812 GBP6Q6ZN66 633 aa22.3■■□□□ 1.16
VPS16-207ENST00000481812 EHBP1Q8NDI1 1231 aa22.3■■□□□ 1.16
VPS16-207ENST00000481812 C3orf58Q8NDZ4 430 aa22.3■■□□□ 1.16
VPS16-207ENST00000481812 LMO3Q8TAP4 145 aa22.3■■□□□ 1.16
VPS16-207ENST00000481812 IGSF21Q96ID5 467 aa22.3■■□□□ 1.16
VPS16-207ENST00000481812 HPDLQ96IR7 371 aa22.3■■□□□ 1.16
VPS16-207ENST00000481812 IMPG2Q9BZV3 1241 aa22.3■■□□□ 1.16
VPS16-207ENST00000481812 MARCH5Q9NX47 278 aa22.3■■□□□ 1.16
VPS16-207ENST00000481812 GDAP2Q9NXN4 497 aa22.3■■□□□ 1.16
VPS16-207ENST00000481812 CACNG4Q9UBN1 327 aa22.3■■□□□ 1.16
VPS16-207ENST00000481812 PRG3Q9Y2Y8 225 aaPredicted RBP22.3■■□□□ 1.16
VPS16-207ENST00000481812 PES1O00541 588 aaKnown RBP22.29■■□□□ 1.16
VPS16-207ENST00000481812 TRAPPC3O43617 180 aa22.29■■□□□ 1.16
VPS16-207ENST00000481812 TADA2AO75478 443 aa22.29■■□□□ 1.16
VPS16-207ENST00000481812 KIF4AO95239 1232 aa22.29■■□□□ 1.16
VPS16-207ENST00000481812 EFEMP2O95967 443 aa22.29■■□□□ 1.16
VPS16-207ENST00000481812 DNAJB2P25686 324 aa22.29■■□□□ 1.16
VPS16-207ENST00000481812 MYL6P60660 151 aa22.29■■□□□ 1.16
VPS16-207ENST00000481812 PLCB3Q01970 1234 aa22.29■■□□□ 1.16
VPS16-207ENST00000481812 EXOC3L4Q17RC7 722 aa22.29■■□□□ 1.16
VPS16-207ENST00000481812 SARM1Q6SZW1 724 aa22.29■■□□□ 1.16
VPS16-207ENST00000481812 TMEM130Q8N3G9 435 aa22.29■■□□□ 1.16
VPS16-207ENST00000481812 CCDC150Q8NCX0 1101 aa22.29■■□□□ 1.16
VPS16-207ENST00000481812 SEMA4DQ92854 862 aa22.29■■□□□ 1.16
VPS16-207ENST00000481812 SLC28A3Q9HAS3 691 aa22.29■■□□□ 1.16
VPS16-207ENST00000481812 NUB1Q9Y5A7 615 aa22.29■■□□□ 1.16
VPS16-207ENST00000481812 TRIOBPQ9H2D6 2365 aa22.28■■□□□ 1.16
VPS16-207ENST00000481812 ARHGEF37A1IGU5 675 aa22.28■■□□□ 1.16
VPS16-207ENST00000481812 KPNA7A9QM74 516 aa22.28■■□□□ 1.16
VPS16-207ENST00000481812 NT5C1B-RDH14C9J2C7 533 aa22.28■■□□□ 1.16
VPS16-207ENST00000481812 ARHGEF15O94989 841 aa22.28■■□□□ 1.16
VPS16-207ENST00000481812 FAM163BP0C2L3 166 aa22.28■■□□□ 1.16
VPS16-207ENST00000481812 UBASH3AP57075 661 aa22.28■■□□□ 1.16
VPS16-207ENST00000481812 NR1I3Q14994 352 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms