RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 PPP2R3AQ06190 1150 aa11.49□□□□□ -0.57
SSBP1-210ENST00000481508 PSMD2Q13200 908 aa11.49□□□□□ -0.57
SSBP1-210ENST00000481508 UPP1Q16831 310 aa11.49□□□□□ -0.57
SSBP1-210ENST00000481508 KNOP1Q1ED39 458 aaKnown RBP11.49□□□□□ -0.57
SSBP1-210ENST00000481508 TIGD5Q53EQ6 642 aa11.49□□□□□ -0.57
SSBP1-210ENST00000481508 KANK3Q6NY19 840 aa11.49□□□□□ -0.57
SSBP1-210ENST00000481508 RBM23Q86U06 439 aaKnown RBP11.49□□□□□ -0.57
SSBP1-210ENST00000481508 BRSK2Q8IWQ3 736 aa11.49□□□□□ -0.57
SSBP1-210ENST00000481508 FEZF2Q8TBJ5 459 aa11.49□□□□□ -0.57
SSBP1-210ENST00000481508 PLEKHO2Q8TD55 490 aa11.49□□□□□ -0.57
SSBP1-210ENST00000481508 COLEC11Q9BWP8 271 aa11.49□□□□□ -0.57
SSBP1-210ENST00000481508 MFRPQ9BY79 579 aa11.49□□□□□ -0.57
SSBP1-210ENST00000481508 GZF1Q9H116 711 aaPredicted RBP11.49□□□□□ -0.57
SSBP1-210ENST00000481508 PLEKHA5Q9HAU0 1116 aa11.49□□□□□ -0.57
SSBP1-210ENST00000481508 ENTPD7Q9NQZ7 604 aa11.49□□□□□ -0.57
SSBP1-210ENST00000481508 FAM86C1Q9NVL1 165 aa11.49□□□□□ -0.57
SSBP1-210ENST00000481508 ADAM28Q9UKQ2 775 aa11.49□□□□□ -0.57
SSBP1-210ENST00000481508 NCOR2Q9Y618 2525 aa11.48□□□□□ -0.57
SSBP1-210ENST00000481508 LILRB3O75022 631 aa11.48□□□□□ -0.57
SSBP1-210ENST00000481508 GLP2RO95838 553 aa11.48□□□□□ -0.57
SSBP1-210ENST00000481508 SOD2P04179 222 aa11.48□□□□□ -0.57
SSBP1-210ENST00000481508 CTSAP10619 480 aa11.48□□□□□ -0.57
SSBP1-210ENST00000481508 NRIP1P48552 1158 aa11.48□□□□□ -0.57
SSBP1-210ENST00000481508 KRT17Q04695 432 aa11.48□□□□□ -0.57
SSBP1-210ENST00000481508 COL19A1Q14993 1142 aa11.48□□□□□ -0.57
SSBP1-210ENST00000481508 PTPN14Q15678 1187 aa11.48□□□□□ -0.57
SSBP1-210ENST00000481508 CAMK4Q16566 473 aa11.48□□□□□ -0.57
SSBP1-210ENST00000481508 KYAT1Q16773 422 aa11.48□□□□□ -0.57
SSBP1-210ENST00000481508 RTP2Q5QGT7 225 aa11.48□□□□□ -0.57
SSBP1-210ENST00000481508 LMBRD2Q68DH5 695 aaPredicted RBP11.48□□□□□ -0.57
SSBP1-210ENST00000481508 TMC7Q7Z402 723 aa11.48□□□□□ -0.57
SSBP1-210ENST00000481508 C12orf56Q8IXR9 622 aa11.48□□□□□ -0.57
SSBP1-210ENST00000481508 ELOA2Q8IYF1 753 aaPredicted RBP11.48□□□□□ -0.57
SSBP1-210ENST00000481508 GPD1LQ8N335 351 aa11.48□□□□□ -0.57
SSBP1-210ENST00000481508 RDH13Q8NBN7 331 aa11.48□□□□□ -0.57
SSBP1-210ENST00000481508 GPT2Q8TD30 523 aa11.48□□□□□ -0.57
SSBP1-210ENST00000481508 MICAL1Q8TDZ2 1067 aa11.48□□□□□ -0.57
SSBP1-210ENST00000481508 SMARCE1Q969G3 411 aa11.48□□□□□ -0.57
SSBP1-210ENST00000481508 IGFLR1Q9H665 355 aa11.48□□□□□ -0.57
SSBP1-210ENST00000481508 PDE11AQ9HCR9 933 aa11.48□□□□□ -0.57
SSBP1-210ENST00000481508 RBAKQ9NYW8 714 aaPredicted RBP11.48□□□□□ -0.57
SSBP1-210ENST00000481508 PUF60Q9UHX1 559 aaKnown RBP11.48□□□□□ -0.57
SSBP1-210ENST00000481508 C2orf16Q68DN1 1984 aa11.48□□□□□ -0.57
SSBP1-210ENST00000481508 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.47□□□□□ -0.57
SSBP1-210ENST00000481508 TMEM189-UBE2V1I3L0A0 370 aa11.47□□□□□ -0.57
SSBP1-210ENST00000481508 TULP1O00294 542 aaPredicted RBP11.47□□□□□ -0.57
SSBP1-210ENST00000481508 BIN1O00499 593 aa11.47□□□□□ -0.57
SSBP1-210ENST00000481508 C2CD2LO14523 706 aa11.47□□□□□ -0.57
SSBP1-210ENST00000481508 CLASP2O75122 1294 aaKnown RBP11.47□□□□□ -0.57
SSBP1-210ENST00000481508 TBX10O75333 385 aa11.47□□□□□ -0.57
SSBP1-210ENST00000481508 TADA2AO75478 443 aa11.47□□□□□ -0.57
SSBP1-210ENST00000481508 B3GAT3O94766 335 aa11.47□□□□□ -0.57
SSBP1-210ENST00000481508 CXCL14O95715 111 aa11.47□□□□□ -0.57
SSBP1-210ENST00000481508 LRPAP1P30533 357 aa11.47□□□□□ -0.57
SSBP1-210ENST00000481508 CA8P35219 290 aa11.47□□□□□ -0.57
SSBP1-210ENST00000481508 LTBRP36941 435 aa11.47□□□□□ -0.57
SSBP1-210ENST00000481508 PRCPP42785 496 aa11.47□□□□□ -0.57
SSBP1-210ENST00000481508 CASP4P49662 377 aa11.47□□□□□ -0.57
SSBP1-210ENST00000481508 PMS1P54277 932 aaKnown RBP11.47□□□□□ -0.57
SSBP1-210ENST00000481508 DLX2Q07687 328 aaPredicted RBP11.47□□□□□ -0.57
SSBP1-210ENST00000481508 SMC1AQ14683 1233 aaKnown RBP11.47□□□□□ -0.57
SSBP1-210ENST00000481508 TMEM132DQ14C87 1099 aa11.47□□□□□ -0.57
SSBP1-210ENST00000481508 DUSP6Q16828 381 aa11.47□□□□□ -0.57
SSBP1-210ENST00000481508 ZCWPW2Q504Y3 356 aa11.47□□□□□ -0.57
SSBP1-210ENST00000481508 KIAA0319Q5VV43 1072 aa11.47□□□□□ -0.57
SSBP1-210ENST00000481508 SPATA1Q5VX52 437 aa11.47□□□□□ -0.57
SSBP1-210ENST00000481508 PRSS55Q6UWB4 352 aaPredicted RBP11.47□□□□□ -0.57
SSBP1-210ENST00000481508 MRPL43Q8N983 215 aaKnown RBP11.47□□□□□ -0.57
SSBP1-210ENST00000481508 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.47□□□□□ -0.57
SSBP1-210ENST00000481508 CXorf38Q8TB03 319 aa11.47□□□□□ -0.57
SSBP1-210ENST00000481508 GSDMAQ96QA5 445 aa11.47□□□□□ -0.57
SSBP1-210ENST00000481508 UBE2ZQ9H832 354 aaPredicted RBP11.47□□□□□ -0.57
SSBP1-210ENST00000481508 SLC38A7Q9NVC3 462 aa11.47□□□□□ -0.57
SSBP1-210ENST00000481508 DMAC2Q9NW81 257 aa11.47□□□□□ -0.57
SSBP1-210ENST00000481508 UBQLN1Q9UMX0 589 aaKnown RBP11.47□□□□□ -0.57
SSBP1-210ENST00000481508 SF3B1O75533 1304 aaKnown RBP eCLIP11.46□□□□□ -0.575e-6■■■□□ 17.1
SSBP1-210ENST00000481508 TRIM49BA6NDI0 452 aa11.46□□□□□ -0.57
SSBP1-210ENST00000481508 SPTLC1O15269 473 aa11.46□□□□□ -0.57
SSBP1-210ENST00000481508 DCXO43602 365 aa11.46□□□□□ -0.57
SSBP1-210ENST00000481508 NR3C1P04150 777 aa11.46□□□□□ -0.57
SSBP1-210ENST00000481508 RPL17P18621 184 aaKnown RBP11.46□□□□□ -0.57
SSBP1-210ENST00000481508 TKTP29401 623 aaKnown RBP11.46□□□□□ -0.57
SSBP1-210ENST00000481508 DSG1Q02413 1049 aa11.46□□□□□ -0.57
SSBP1-210ENST00000481508 MMRN1Q13201 1228 aa11.46□□□□□ -0.57
SSBP1-210ENST00000481508 KCNC3Q14003 757 aa11.46□□□□□ -0.57
SSBP1-210ENST00000481508 ZNF658Q5TYW1 1059 aaPredicted RBP11.46□□□□□ -0.57
SSBP1-210ENST00000481508 FAM171A1Q5VUB5 890 aa11.46□□□□□ -0.57
SSBP1-210ENST00000481508 C9orf57Q5W0N0 161 aa11.46□□□□□ -0.57
SSBP1-210ENST00000481508 LLGL2Q6P1M3 1020 aa11.46□□□□□ -0.57
SSBP1-210ENST00000481508 DCLRE1AQ6PJP8 1040 aa11.46□□□□□ -0.57
SSBP1-210ENST00000481508 HS2ST1Q7LGA3 356 aa11.46□□□□□ -0.57
SSBP1-210ENST00000481508 CD302Q8IX05 232 aa11.46□□□□□ -0.57
SSBP1-210ENST00000481508 GUF1Q8N442 669 aaKnown RBP11.46□□□□□ -0.57
SSBP1-210ENST00000481508 XXYLT1Q8NBI6 393 aa11.46□□□□□ -0.57
SSBP1-210ENST00000481508 OR5B17Q8NGF7 314 aa11.46□□□□□ -0.57
SSBP1-210ENST00000481508 CCDC47Q96A33 483 aaKnown RBP11.46□□□□□ -0.57
SSBP1-210ENST00000481508 UROC1Q96N76 676 aa11.46□□□□□ -0.57
SSBP1-210ENST00000481508 KLHL5Q96PQ7 755 aa11.46□□□□□ -0.57
SSBP1-210ENST00000481508 POP1Q99575 1024 aaKnown RBP11.46□□□□□ -0.57
SSBP1-210ENST00000481508 KRTAP3-3Q9BYR6 98 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms