RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 PLS1Q14651 629 aa4.8□□□□□ -1.64
CBX3-207ENST00000481300 KIAA0753Q2KHM9 967 aa4.8□□□□□ -1.64
CBX3-207ENST00000481300 DACT2Q5SW24 774 aa4.8□□□□□ -1.64
CBX3-207ENST00000481300 CHST15Q7LFX5 561 aaPredicted RBP4.8□□□□□ -1.64
CBX3-207ENST00000481300 UBE3BQ7Z3V4 1068 aa4.8□□□□□ -1.64
CBX3-207ENST00000481300 AOPEPQ8N6M6 819 aa4.8□□□□□ -1.64
CBX3-207ENST00000481300 AMER2Q8N7J2 671 aa4.8□□□□□ -1.64
CBX3-207ENST00000481300 DCBLD1Q8N8Z6 715 aa4.8□□□□□ -1.64
CBX3-207ENST00000481300 RNF169Q8NCN4 708 aa4.8□□□□□ -1.64
CBX3-207ENST00000481300 BRIX1Q8TDN6 353 aaKnown RBP4.8□□□□□ -1.64
CBX3-207ENST00000481300 LRFN3Q9BTN0 628 aa4.8□□□□□ -1.64
CBX3-207ENST00000481300 LSM14BQ9BX40 385 aaKnown RBP4.8□□□□□ -1.64
CBX3-207ENST00000481300 ZNF703Q9H7S9 590 aaPredicted RBP4.8□□□□□ -1.64
CBX3-207ENST00000481300 SARS2Q9NP81 518 aaKnown RBP4.8□□□□□ -1.64
CBX3-207ENST00000481300 SIDT1Q9NXL6 827 aaKnown RBP4.8□□□□□ -1.64
CBX3-207ENST00000481300 SLC23A1Q9UHI7 598 aa4.8□□□□□ -1.64
CBX3-207ENST00000481300 ABCC9O60706 1549 aa4.79□□□□□ -1.64
CBX3-207ENST00000481300 A0A088AWK7 358 aa4.79□□□□□ -1.64
CBX3-207ENST00000481300 CCDC194A0A1B0GVG4 234 aa4.79□□□□□ -1.64
CBX3-207ENST00000481300 A0A1W2PPL8 197 aa4.79□□□□□ -1.64
CBX3-207ENST00000481300 KRTAP23-1A1A580 65 aa4.79□□□□□ -1.64
CBX3-207ENST00000481300 CFAP69A5D8W1 941 aa4.79□□□□□ -1.64
CBX3-207ENST00000481300 F2RL2O00254 374 aa4.79□□□□□ -1.64
CBX3-207ENST00000481300 NBPF7P0C2Y1 421 aaPredicted RBP4.79□□□□□ -1.64
CBX3-207ENST00000481300 RHCEP18577 417 aa4.79□□□□□ -1.64
CBX3-207ENST00000481300 MCM7P33993 719 aa4.79□□□□□ -1.64
CBX3-207ENST00000481300 PIK3CGP48736 1102 aa4.79□□□□□ -1.64
CBX3-207ENST00000481300 USP14P54578 494 aa4.79□□□□□ -1.64
CBX3-207ENST00000481300 TGFB2P61812 414 aa4.79□□□□□ -1.64
CBX3-207ENST00000481300 NKX6-1P78426 367 aaPredicted RBP4.79□□□□□ -1.64
CBX3-207ENST00000481300 PURAQ00577 322 aaKnown RBP4.79□□□□□ -1.64
CBX3-207ENST00000481300 RHDQ02161 417 aa4.79□□□□□ -1.64
CBX3-207ENST00000481300 CRHR2Q13324 411 aa4.79□□□□□ -1.64
CBX3-207ENST00000481300 TUBA3CQ13748 450 aa4.79□□□□□ -1.64
CBX3-207ENST00000481300 COBLL1Q53SF7 1204 aa4.79□□□□□ -1.64
CBX3-207ENST00000481300 DCAF17Q5H9S7 520 aaPredicted RBP4.79□□□□□ -1.64
CBX3-207ENST00000481300 METTL24Q5JXM2 366 aa4.79□□□□□ -1.64
CBX3-207ENST00000481300 TUBA3EQ6PEY2 450 aa4.79□□□□□ -1.64
CBX3-207ENST00000481300 DARS2Q6PI48 645 aaKnown RBP4.79□□□□□ -1.64
CBX3-207ENST00000481300 FAM156AQ8NDB6 213 aa4.79□□□□□ -1.64
CBX3-207ENST00000481300 OR52N2Q8NGI0 321 aa4.79□□□□□ -1.64
CBX3-207ENST00000481300 TNPO1Q92973 898 aaKnown RBP4.79□□□□□ -1.64
CBX3-207ENST00000481300 CHFRQ96EP1 664 aa4.79□□□□□ -1.64
CBX3-207ENST00000481300 SARGQ9BW04 601 aa4.79□□□□□ -1.64
CBX3-207ENST00000481300 ARNT2Q9HBZ2 717 aa4.79□□□□□ -1.64
CBX3-207ENST00000481300 SLAMF7Q9NQ25 335 aa4.79□□□□□ -1.64
CBX3-207ENST00000481300 STAP2Q9UGK3 403 aa4.79□□□□□ -1.64
CBX3-207ENST00000481300 FAM50BQ9Y247 325 aa4.79□□□□□ -1.64
CBX3-207ENST00000481300 PCDHA1Q9Y5I3 950 aa4.79□□□□□ -1.64
CBX3-207ENST00000481300 A6NNZ2 444 aa4.78□□□□□ -1.64
CBX3-207ENST00000481300 GOLGA6L6A8MZA4 724 aa4.78□□□□□ -1.64
CBX3-207ENST00000481300 NT5C1B-RDH14C9J2C7 533 aa4.78□□□□□ -1.64
CBX3-207ENST00000481300 MGEA5O60502 916 aa4.78□□□□□ -1.64
CBX3-207ENST00000481300 HAUS5O94927 633 aa4.78□□□□□ -1.64
CBX3-207ENST00000481300 HRGP04196 525 aa4.78□□□□□ -1.64
CBX3-207ENST00000481300 TRIM27P14373 513 aa4.78□□□□□ -1.64
CBX3-207ENST00000481300 PRDX5P30044 214 aa4.78□□□□□ -1.64
CBX3-207ENST00000481300 UBXN2BQ14CS0 331 aa4.78□□□□□ -1.64
CBX3-207ENST00000481300 CNN3Q15417 329 aaKnown RBP4.78□□□□□ -1.64
CBX3-207ENST00000481300 SAFBQ15424 915 aaKnown RBP eCLIP4.78□□□□□ -1.64
CBX3-207ENST00000481300 VPS72Q15906 364 aa4.78□□□□□ -1.64
CBX3-207ENST00000481300 CCDC93Q567U6 631 aa4.78□□□□□ -1.64
CBX3-207ENST00000481300 KHDC1LQ5JSQ8 128 aa4.78□□□□□ -1.64
CBX3-207ENST00000481300 DRICH1Q6PGQ1 229 aaPredicted RBP4.78□□□□□ -1.64
CBX3-207ENST00000481300 MAEAQ7L5Y9 396 aa4.78□□□□□ -1.64
CBX3-207ENST00000481300 GPRIN1Q7Z2K8 1008 aa4.78□□□□□ -1.64
CBX3-207ENST00000481300 TMPRSS6Q8IU80 811 aa4.78□□□□□ -1.64
CBX3-207ENST00000481300 KIAA0319LQ8IZA0 1049 aa4.78□□□□□ -1.64
CBX3-207ENST00000481300 IL17RDQ8NFM7 739 aa4.78□□□□□ -1.64
CBX3-207ENST00000481300 OR10H5Q8NGA6 315 aa4.78□□□□□ -1.64
CBX3-207ENST00000481300 PLBD2Q8NHP8 589 aa4.78□□□□□ -1.64
CBX3-207ENST00000481300 PGBD4Q96DM1 585 aa4.78□□□□□ -1.64
CBX3-207ENST00000481300 PHACTR3Q96KR7 559 aa4.78□□□□□ -1.64
CBX3-207ENST00000481300 NDC1Q9BTX1 674 aa4.78□□□□□ -1.64
CBX3-207ENST00000481300 GPR87Q9BY21 358 aa4.78□□□□□ -1.64
CBX3-207ENST00000481300 CPEB1Q9BZB8 566 aaKnown RBP4.78□□□□□ -1.64
CBX3-207ENST00000481300 REXO4Q9GZR2 422 aaKnown RBP4.78□□□□□ -1.64
CBX3-207ENST00000481300 IKZF4Q9H2S9 585 aa4.78□□□□□ -1.64
CBX3-207ENST00000481300 GSTO2Q9H4Y5 243 aa4.78□□□□□ -1.64
CBX3-207ENST00000481300 MMRN2Q9H8L6 949 aa4.78□□□□□ -1.64
CBX3-207ENST00000481300 BRD9Q9H8M2 597 aa4.78□□□□□ -1.64
CBX3-207ENST00000481300 AURKAIP1Q9NWT8 199 aaPredicted RBP4.78□□□□□ -1.64
CBX3-207ENST00000481300 CPA4Q9UI42 421 aa4.78□□□□□ -1.64
CBX3-207ENST00000481300 L1RE1Q9UN81 338 aa4.78□□□□□ -1.64
CBX3-207ENST00000481300 PNPLA7Q6ZV29 1317 aa4.77□□□□□ -1.65
CBX3-207ENST00000481300 GOLIM4O00461 696 aa4.77□□□□□ -1.65
CBX3-207ENST00000481300 PHGDHO43175 533 aaKnown RBP4.77□□□□□ -1.65
CBX3-207ENST00000481300 ITGB1P05556 798 aa4.77□□□□□ -1.65
CBX3-207ENST00000481300 SBK3P0C264 359 aa4.77□□□□□ -1.65
CBX3-207ENST00000481300 MAN2A2P49641 1150 aa4.77□□□□□ -1.65
CBX3-207ENST00000481300 DPTQ07507 201 aa4.77□□□□□ -1.65
CBX3-207ENST00000481300 CNGB1Q14028 1251 aaPredicted RBP4.77□□□□□ -1.65
CBX3-207ENST00000481300 RRP1BQ14684 758 aaKnown RBP4.77□□□□□ -1.65
CBX3-207ENST00000481300 RNF220Q5VTB9 566 aa4.77□□□□□ -1.65
CBX3-207ENST00000481300 MED25Q71SY5 747 aa4.77□□□□□ -1.65
CBX3-207ENST00000481300 FAM90A1Q86YD7 464 aa4.77□□□□□ -1.65
CBX3-207ENST00000481300 FAM43AQ8N2R8 423 aa4.77□□□□□ -1.65
CBX3-207ENST00000481300 FITM2Q8N6M3 262 aa4.77□□□□□ -1.65
CBX3-207ENST00000481300 NEU4Q8WWR8 484 aaPredicted RBP4.77□□□□□ -1.65
CBX3-207ENST00000481300 LRTOMTQ8WZ04 291 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms