RNA–Protein interactions for RNA: ENST00000481057.1

CBX3-206, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 860 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-206ENST00000481057 Q9UFV3 132 aa8.2□□□□□ -1.1
CBX3-206ENST00000481057 ADAM29Q9UKF5 820 aa8.2□□□□□ -1.1
CBX3-206ENST00000481057 NIP7Q9Y221 180 aaKnown RBP eCLIP8.2□□□□□ -1.1
CBX3-206ENST00000481057 PPP2R3BQ9Y5P8 575 aa8.2□□□□□ -1.1
CBX3-206ENST00000481057 hCG_2014768A0A024R1R8 64 aa8.19□□□□□ -1.1
CBX3-206ENST00000481057 CCL15-CCL14A0A0B4J2E2 113 aa8.19□□□□□ -1.1
CBX3-206ENST00000481057 MROH6A6NGR9 719 aa8.19□□□□□ -1.1
CBX3-206ENST00000481057 U2AF1L5P0DN76 240 aaPredicted RBP8.19□□□□□ -1.1
CBX3-206ENST00000481057 BMP7P18075 431 aa8.19□□□□□ -1.1
CBX3-206ENST00000481057 CSF2RBP32927 897 aa8.19□□□□□ -1.1
CBX3-206ENST00000481057 MANFP55145 182 aaKnown RBP8.19□□□□□ -1.1
CBX3-206ENST00000481057 U2AF1Q01081 240 aaKnown RBP eCLIP8.19□□□□□ -1.1
CBX3-206ENST00000481057 FAPQ12884 760 aa8.19□□□□□ -1.1
CBX3-206ENST00000481057 PDCD1Q15116 288 aa8.19□□□□□ -1.1
CBX3-206ENST00000481057 CCL15Q16663 113 aa8.19□□□□□ -1.1
CBX3-206ENST00000481057 DGLUCYQ7Z3D6 616 aa8.19□□□□□ -1.1
CBX3-206ENST00000481057 LURAP1LQ8IV03 231 aa8.19□□□□□ -1.1
CBX3-206ENST00000481057 BCL6BQ8N143 479 aaPredicted RBP8.19□□□□□ -1.1
CBX3-206ENST00000481057 TIFAQ96CG3 184 aa8.19□□□□□ -1.1
CBX3-206ENST00000481057 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.19□□□□□ -1.1
CBX3-206ENST00000481057 ASH1LQ9NR48 2969 aaKnown RBP8.19□□□□□ -1.1
CBX3-206ENST00000481057 SLC5A4Q9NY91 659 aa8.19□□□□□ -1.1
CBX3-206ENST00000481057 KCMF1Q9P0J7 381 aa8.19□□□□□ -1.1
CBX3-206ENST00000481057 GABRQQ9UN88 632 aa8.19□□□□□ -1.1
CBX3-206ENST00000481057 LRRC37A2A6NM11 1700 aa8.19□□□□□ -1.1
CBX3-206ENST00000481057 ATRNL1Q5VV63 1379 aa8.19□□□□□ -1.1
CBX3-206ENST00000481057 ABCC12Q96J65 1359 aa8.19□□□□□ -1.1
CBX3-206ENST00000481057 FAM186AA6NE01 2351 aa8.19□□□□□ -1.1
CBX3-206ENST00000481057 USP24Q9UPU5 2620 aa8.18□□□□□ -1.1
CBX3-206ENST00000481057 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.18□□□□□ -1.1
CBX3-206ENST00000481057 CENPBP07199 599 aaPredicted RBP8.18□□□□□ -1.1
CBX3-206ENST00000481057 TCF15Q12870 199 aa8.18□□□□□ -1.1
CBX3-206ENST00000481057 C17orf99Q6UX52 265 aa8.18□□□□□ -1.1
CBX3-206ENST00000481057 RPUSD2Q8IZ73 545 aaKnown RBP8.18□□□□□ -1.1
CBX3-206ENST00000481057 ZKSCAN4Q969J2 545 aaPredicted RBP8.18□□□□□ -1.1
CBX3-206ENST00000481057 HAPLN2Q9GZV7 340 aa8.18□□□□□ -1.1
CBX3-206ENST00000481057 MTG2Q9H4K7 406 aa8.18□□□□□ -1.1
CBX3-206ENST00000481057 CDC42EP3Q9UKI2 254 aa8.18□□□□□ -1.1
CBX3-206ENST00000481057 DENND2AQ9ULE3 1009 aa8.18□□□□□ -1.1
CBX3-206ENST00000481057 KRTAP9-6A0A140TA67 174 aa8.17□□□□□ -1.1
CBX3-206ENST00000481057 PRSS38A1L453 326 aa8.17□□□□□ -1.1
CBX3-206ENST00000481057 K7ESF4 209 aa8.17□□□□□ -1.1
CBX3-206ENST00000481057 ECE2O60344 883 aa8.17□□□□□ -1.1
CBX3-206ENST00000481057 SASH1O94885 1247 aa8.17□□□□□ -1.1
CBX3-206ENST00000481057 HMGCRP04035 888 aa8.17□□□□□ -1.1
CBX3-206ENST00000481057 DGKDQ16760 1214 aa8.17□□□□□ -1.1
CBX3-206ENST00000481057 PLEKHO1Q53GL0 409 aaPredicted RBP8.17□□□□□ -1.1
CBX3-206ENST00000481057 GPR155Q7Z3F1 870 aa8.17□□□□□ -1.1
CBX3-206ENST00000481057 BMP8AQ7Z5Y6 402 aa8.17□□□□□ -1.1
CBX3-206ENST00000481057 FEZF2Q8TBJ5 459 aa8.17□□□□□ -1.1
CBX3-206ENST00000481057 AHCYL2Q96HN2 611 aaKnown RBP8.17□□□□□ -1.1
CBX3-206ENST00000481057 TRIM8Q9BZR9 551 aa8.17□□□□□ -1.1
CBX3-206ENST00000481057 PUS7LQ9H0K6 701 aaKnown RBP8.17□□□□□ -1.1
CBX3-206ENST00000481057 WNT8AQ9H1J5 351 aa8.17□□□□□ -1.1
CBX3-206ENST00000481057 CPA4Q9UI42 421 aa8.17□□□□□ -1.1
CBX3-206ENST00000481057 DMDP11532 3685 aa8.17□□□□□ -1.1
CBX3-206ENST00000481057 A0A0A6YYJ9 748 aa8.16□□□□□ -1.1
CBX3-206ENST00000481057 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.16□□□□□ -1.1
CBX3-206ENST00000481057 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.16□□□□□ -1.1
CBX3-206ENST00000481057 ALG1L2C9J202 215 aa8.16□□□□□ -1.1
CBX3-206ENST00000481057 OPHN1O60890 802 aa8.16□□□□□ -1.1
CBX3-206ENST00000481057 PFKMP08237 780 aa8.16□□□□□ -1.1
CBX3-206ENST00000481057 CLEC2LP0C7M8 214 aa8.16□□□□□ -1.1
CBX3-206ENST00000481057 TNNT2P45379 298 aaPredicted RBP8.16□□□□□ -1.1
CBX3-206ENST00000481057 STAT5BP51692 787 aa8.16□□□□□ -1.1
CBX3-206ENST00000481057 GUCY2FP51841 1108 aa8.16□□□□□ -1.1
CBX3-206ENST00000481057 ERVK-21P61565 698 aa8.16□□□□□ -1.1
CBX3-206ENST00000481057 USP10Q14694 798 aaKnown RBP8.16□□□□□ -1.1
CBX3-206ENST00000481057 C1orf141Q5JVX7 400 aa8.16□□□□□ -1.1
CBX3-206ENST00000481057 SPOCD1Q6ZMY3 1216 aa8.16□□□□□ -1.1
CBX3-206ENST00000481057 ASCL5Q7RTU5 278 aa8.16□□□□□ -1.1
CBX3-206ENST00000481057 RALYLQ86SE5 291 aaKnown RBP8.16□□□□□ -1.1
CBX3-206ENST00000481057 FAM124AQ86V42 546 aa8.16□□□□□ -1.1
CBX3-206ENST00000481057 CNTD1Q8N815 330 aa8.16□□□□□ -1.1
CBX3-206ENST00000481057 OPTNQ96CV9 577 aa8.16□□□□□ -1.1
CBX3-206ENST00000481057 ACAP3Q96P50 834 aa8.16□□□□□ -1.1
CBX3-206ENST00000481057 CARD11Q9BXL7 1154 aa8.16□□□□□ -1.1
CBX3-206ENST00000481057 USP40Q9NVE5 1235 aa8.16□□□□□ -1.1
CBX3-206ENST00000481057 C14orf119Q9NWQ9 140 aa8.16□□□□□ -1.1
CBX3-206ENST00000481057 PCDH8O95206 1070 aa8.15□□□□□ -1.1
CBX3-206ENST00000481057 ZNF888P0CJ79 500 aaPredicted RBP8.15□□□□□ -1.1
CBX3-206ENST00000481057 ANTXR2P58335 489 aa8.15□□□□□ -1.1
CBX3-206ENST00000481057 TRIM68Q6AZZ1 485 aa8.15□□□□□ -1.1
CBX3-206ENST00000481057 CCDC62Q6P9F0 684 aa8.15□□□□□ -1.1
CBX3-206ENST00000481057 LARP4Q71RC2 724 aaKnown RBP eCLIP8.15□□□□□ -1.15e-13■■□□□ 14.4
CBX3-206ENST00000481057 CMIPQ8IY22 773 aa8.15□□□□□ -1.1
CBX3-206ENST00000481057 AGBL3Q8NEM8 1001 aa8.15□□□□□ -1.1
CBX3-206ENST00000481057 ANO3Q9BYT9 981 aa8.15□□□□□ -1.1
CBX3-206ENST00000481057 XYLT2Q9H1B5 865 aa8.15□□□□□ -1.1
CBX3-206ENST00000481057 ZCCHC4Q9H5U6 513 aa8.15□□□□□ -1.1
CBX3-206ENST00000481057 POLR3BQ9NW08 1133 aaPredicted RBP8.15□□□□□ -1.1
CBX3-206ENST00000481057 SAE1Q9UBE0 346 aaPredicted RBP8.15□□□□□ -1.1
CBX3-206ENST00000481057 KCNG1Q9UIX4 513 aa8.15□□□□□ -1.1
CBX3-206ENST00000481057 MAGEL2Q9UJ55 1249 aa8.15□□□□□ -1.1
CBX3-206ENST00000481057 OGDHLQ9ULD0 1010 aa8.15□□□□□ -1.1
CBX3-206ENST00000481057 ZDHHC9Q9Y397 364 aa8.15□□□□□ -1.1
CBX3-206ENST00000481057 MAFGO15525 162 aa8.14□□□□□ -1.11
CBX3-206ENST00000481057 B4GALT3O60512 393 aa8.14□□□□□ -1.11
CBX3-206ENST00000481057 A1BGP04217 495 aa8.14□□□□□ -1.11
CBX3-206ENST00000481057 FLT3LGP49771 235 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms