RNA–Protein interactions for RNA: ENST00000480961.1

CTSA-206, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 513 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-206ENST00000480961 FRMD4BQ9Y2L6 1034 aa22.01■■□□□ 1.11
CTSA-206ENST00000480961 TDRD15B5MCY1 1934 aaKnown RBP22■■□□□ 1.11
CTSA-206ENST00000480961 ANO9A1A5B4 782 aa22■■□□□ 1.11
CTSA-206ENST00000480961 PIRO00625 290 aa22■■□□□ 1.11
CTSA-206ENST00000480961 PSMA7O14818 248 aa22■■□□□ 1.11
CTSA-206ENST00000480961 TRAPPC3O43617 180 aa22■■□□□ 1.11
CTSA-206ENST00000480961 CLASP2O75122 1294 aaKnown RBP22■■□□□ 1.11
CTSA-206ENST00000480961 SLC34A2O95436 690 aa22■■□□□ 1.11
CTSA-206ENST00000480961 ITGB3P05106 788 aa22■■□□□ 1.11
CTSA-206ENST00000480961 CNPP09543 421 aaKnown RBP22■■□□□ 1.11
CTSA-206ENST00000480961 TMEM191BP0C7N4 346 aa22■■□□□ 1.11
CTSA-206ENST00000480961 TNNI1P19237 187 aa22■■□□□ 1.11
CTSA-206ENST00000480961 RPL13P26373 211 aaKnown RBP22■■□□□ 1.11
CTSA-206ENST00000480961 POLR2BP30876 1174 aaKnown RBP22■■□□□ 1.11
CTSA-206ENST00000480961 STX17P56962 302 aa22■■□□□ 1.11
CTSA-206ENST00000480961 MYBPC2Q14324 1141 aa22■■□□□ 1.11
CTSA-206ENST00000480961 SURF1Q15526 300 aa22■■□□□ 1.11
CTSA-206ENST00000480961 GLYCTKQ8IVS8 523 aa22■■□□□ 1.11
CTSA-206ENST00000480961 CSGALNACT2Q8N6G5 542 aa22■■□□□ 1.11
CTSA-206ENST00000480961 NELFBQ8WX92 580 aa22■■□□□ 1.11
CTSA-206ENST00000480961 ZNF516Q92618 1163 aa22■■□□□ 1.11
CTSA-206ENST00000480961 PPP2R3CQ969Q6 453 aa22■■□□□ 1.11
CTSA-206ENST00000480961 KLHL5Q96PQ7 755 aa22■■□□□ 1.11
CTSA-206ENST00000480961 TSG101Q99816 390 aa22■■□□□ 1.11
CTSA-206ENST00000480961 CLDND1Q9NY35 253 aa22■■□□□ 1.11
CTSA-206ENST00000480961 AGAP1Q9UPQ3 857 aa22■■□□□ 1.11
CTSA-206ENST00000480961 CTNND2Q9UQB3 1225 aa22■■□□□ 1.11
CTSA-206ENST00000480961 KRT19P08727 400 aa21.99■■□□□ 1.11
CTSA-206ENST00000480961 FGFR3P22607 806 aa21.99■■□□□ 1.11
CTSA-206ENST00000480961 CCNE1P24864 410 aa21.99■■□□□ 1.11
CTSA-206ENST00000480961 DLG4P78352 724 aa21.99■■□□□ 1.11
CTSA-206ENST00000480961 ELAVL2Q12926 359 aaKnown RBP21.99■■□□□ 1.11
CTSA-206ENST00000480961 NFIL3Q16649 462 aa21.99■■□□□ 1.11
CTSA-206ENST00000480961 DUOXA2Q1HG44 320 aa21.99■■□□□ 1.11
CTSA-206ENST00000480961 DSTYKQ6XUX3 929 aa21.99■■□□□ 1.11
CTSA-206ENST00000480961 NT5DC4Q86YG4 428 aa21.99■■□□□ 1.11
CTSA-206ENST00000480961 VN1R2Q8NFZ6 395 aa21.99■■□□□ 1.11
CTSA-206ENST00000480961 TMEM174Q8WUU8 243 aa21.99■■□□□ 1.11
CTSA-206ENST00000480961 DHTKD1Q96HY7 919 aaPredicted RBP21.99■■□□□ 1.11
CTSA-206ENST00000480961 ANKRD36BP1Q96IX9 119 aa21.99■■□□□ 1.11
CTSA-206ENST00000480961 CGRRF1Q99675 332 aa21.99■■□□□ 1.11
CTSA-206ENST00000480961 TIMM13Q9Y5L4 95 aaPredicted RBP21.99■■□□□ 1.11
CTSA-206ENST00000480961 TRIP11Q15643 1979 aa21.98■■□□□ 1.11
CTSA-206ENST00000480961 LRRIQ3A6PVS8 624 aaPredicted RBP21.98■■□□□ 1.11
CTSA-206ENST00000480961 TEX28O15482 410 aa21.98■■□□□ 1.11
CTSA-206ENST00000480961 TNNC2P02585 160 aa21.98■■□□□ 1.11
CTSA-206ENST00000480961 KLRC2P26717 231 aa21.98■■□□□ 1.11
CTSA-206ENST00000480961 LILRA4P59901 499 aa21.98■■□□□ 1.11
CTSA-206ENST00000480961 ADAM15Q13444 863 aa21.98■■□□□ 1.11
CTSA-206ENST00000480961 EDRF1Q3B7T1 1238 aa21.98■■□□□ 1.11
CTSA-206ENST00000480961 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.98■■□□□ 1.11
CTSA-206ENST00000480961 WDR49Q8IV35 697 aa21.98■■□□□ 1.11
CTSA-206ENST00000480961 FAM186BQ8IYM0 893 aa21.98■■□□□ 1.11
CTSA-206ENST00000480961 TRIML1Q8N9V2 468 aa21.98■■□□□ 1.11
CTSA-206ENST00000480961 CXorf38Q8TB03 319 aa21.98■■□□□ 1.11
CTSA-206ENST00000480961 LNX1Q8TBB1 728 aaPredicted RBP21.98■■□□□ 1.11
CTSA-206ENST00000480961 PARD3BQ8TEW8 1205 aa21.98■■□□□ 1.11
CTSA-206ENST00000480961 SUSD3Q96L08 255 aa21.98■■□□□ 1.11
CTSA-206ENST00000480961 EMILIN2Q9BXX0 1053 aa21.98■■□□□ 1.11
CTSA-206ENST00000480961 SIX4Q9UIU6 781 aa21.98■■□□□ 1.11
CTSA-206ENST00000480961 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.98■■□□□ 1.11
CTSA-206ENST00000480961 IRAK3Q9Y616 596 aa21.98■■□□□ 1.11
CTSA-206ENST00000480961 CETN3O15182 167 aa21.97■■□□□ 1.11
CTSA-206ENST00000480961 ADAM12O43184 909 aa21.97■■□□□ 1.11
CTSA-206ENST00000480961 MBD3O95983 291 aa21.97■■□□□ 1.11
CTSA-206ENST00000480961 PSMC2P35998 433 aaKnown RBP21.97■■□□□ 1.11
CTSA-206ENST00000480961 TFF2Q03403 129 aa21.97■■□□□ 1.11
CTSA-206ENST00000480961 DLX2Q07687 328 aaPredicted RBP21.97■■□□□ 1.11
CTSA-206ENST00000480961 TRAPPC11Q7Z392 1133 aa21.97■■□□□ 1.11
CTSA-206ENST00000480961 EFHBQ8N7U6 833 aa21.97■■□□□ 1.11
CTSA-206ENST00000480961 HLA-CQ95604 372 aa21.97■■□□□ 1.11
CTSA-206ENST00000480961 DUSP9Q99956 384 aaKnown RBP21.97■■□□□ 1.11
CTSA-206ENST00000480961 RXFP1Q9HBX9 757 aa21.97■■□□□ 1.11
CTSA-206ENST00000480961 SSX2IPQ9Y2D8 614 aa21.97■■□□□ 1.11
CTSA-206ENST00000480961 CITO14578 2027 aa21.97■■□□□ 1.11
CTSA-206ENST00000480961 H3BQ06 376 aaPredicted RBP21.96■■□□□ 1.11
CTSA-206ENST00000480961 GLP2RO95838 553 aa21.96■■□□□ 1.11
CTSA-206ENST00000480961 EPCAMP16422 314 aa21.96■■□□□ 1.11
CTSA-206ENST00000480961 KCNA5P22460 613 aa21.96■■□□□ 1.11
CTSA-206ENST00000480961 LTBRP36941 435 aa21.96■■□□□ 1.11
CTSA-206ENST00000480961 RBP5P82980 135 aa21.96■■□□□ 1.11
CTSA-206ENST00000480961 CLUL1Q15846 466 aa21.96■■□□□ 1.11
CTSA-206ENST00000480961 PSMD5Q16401 504 aa21.96■■□□□ 1.11
CTSA-206ENST00000480961 CTC1Q2NKJ3 1217 aa21.96■■□□□ 1.11
CTSA-206ENST00000480961 VARS2Q5ST30 1063 aaKnown RBP21.96■■□□□ 1.11
CTSA-206ENST00000480961 RSPO2Q6UXX9 243 aaPredicted RBP21.96■■□□□ 1.11
CTSA-206ENST00000480961 PALB2Q86YC2 1186 aa21.96■■□□□ 1.11
CTSA-206ENST00000480961 PIK3R5Q8WYR1 880 aa21.96■■□□□ 1.11
CTSA-206ENST00000480961 PABPC5Q96DU9 382 aaKnown RBP21.96■■□□□ 1.11
CTSA-206ENST00000480961 SENP8Q96LD8 212 aa21.96■■□□□ 1.11
CTSA-206ENST00000480961 UBE2ZQ9H832 354 aaPredicted RBP21.96■■□□□ 1.11
CTSA-206ENST00000480961 ITGA11Q9UKX5 1188 aa21.96■■□□□ 1.11
CTSA-206ENST00000480961 BARX2Q9UMQ3 279 aaPredicted RBP21.96■■□□□ 1.11
CTSA-206ENST00000480961 PCDHB8Q9UN66 801 aa21.96■■□□□ 1.11
CTSA-206ENST00000480961 CST3P01034 146 aaPredicted RBP21.95■■□□□ 1.1
CTSA-206ENST00000480961 SPATA31D3P0C874 917 aa21.95■■□□□ 1.1
CTSA-206ENST00000480961 TRIM49P0CI25 452 aa21.95■■□□□ 1.1
CTSA-206ENST00000480961 TRIM49CP0CI26 452 aa21.95■■□□□ 1.1
CTSA-206ENST00000480961 PPP1R2P41236 205 aa21.95■■□□□ 1.1
CTSA-206ENST00000480961 AARSP49588 968 aaKnown RBP eCLIP21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms