RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 GOLGA2P5Q9HBQ8 144 aa12.44□□□□□ -0.42
CCM2-213ENST00000480658 HSFX1Q9UBD0 423 aa12.44□□□□□ -0.42
CCM2-213ENST00000480658 AFF4Q9UHB7 1163 aaKnown RBP12.44□□□□□ -0.42
CCM2-213ENST00000480658 CDH22Q9UJ99 828 aa12.44□□□□□ -0.42
CCM2-213ENST00000480658 CFAP45Q9UL16 551 aa12.44□□□□□ -0.42
CCM2-213ENST00000480658 POLIQ9UNA4 740 aa12.44□□□□□ -0.42
CCM2-213ENST00000480658 MTMR6Q9Y217 621 aa12.44□□□□□ -0.42
CCM2-213ENST00000480658 MTCL1Q9Y4B5 1905 aaKnown RBP12.43□□□□□ -0.42
CCM2-213ENST00000480658 NPHP3-ACAD11A0A0J9YXS1 232 aa12.43□□□□□ -0.42
CCM2-213ENST00000480658 ANHXE9PGG2 379 aa12.43□□□□□ -0.42
CCM2-213ENST00000480658 OAZ2O95190 189 aa12.43□□□□□ -0.42
CCM2-213ENST00000480658 FGF19O95750 216 aa12.43□□□□□ -0.42
CCM2-213ENST00000480658 ASGR2P07307 311 aa12.43□□□□□ -0.42
CCM2-213ENST00000480658 CPB1P15086 417 aa12.43□□□□□ -0.42
CCM2-213ENST00000480658 TYMPP19971 482 aa12.43□□□□□ -0.42
CCM2-213ENST00000480658 AARSP49588 968 aaKnown RBP eCLIP12.43□□□□□ -0.42
CCM2-213ENST00000480658 NHLH1Q02575 133 aa12.43□□□□□ -0.42
CCM2-213ENST00000480658 SOX4Q06945 474 aaPredicted RBP12.43□□□□□ -0.42
CCM2-213ENST00000480658 MRPL58Q14197 206 aaKnown RBP12.43□□□□□ -0.42
CCM2-213ENST00000480658 TMEM132DQ14C87 1099 aa12.43□□□□□ -0.42
CCM2-213ENST00000480658 SPATA1Q5VX52 437 aa12.43□□□□□ -0.42
CCM2-213ENST00000480658 ADALQ6DHV7 355 aa12.43□□□□□ -0.42
CCM2-213ENST00000480658 ZNF720Q7Z2F6 126 aa12.43□□□□□ -0.42
CCM2-213ENST00000480658 C3orf58Q8NDZ4 430 aa12.43□□□□□ -0.42
CCM2-213ENST00000480658 POMGNT1Q8WZA1 660 aa12.43□□□□□ -0.42
CCM2-213ENST00000480658 EPSTI1Q96J88 318 aa12.43□□□□□ -0.42
CCM2-213ENST00000480658 ZBTB45Q96K62 511 aaPredicted RBP12.43□□□□□ -0.42
CCM2-213ENST00000480658 ZNF560Q96MR9 790 aa12.43□□□□□ -0.42
CCM2-213ENST00000480658 ACCSQ96QU6 501 aa12.43□□□□□ -0.42
CCM2-213ENST00000480658 SLC2A4RGQ9NR83 387 aa12.43□□□□□ -0.42
CCM2-213ENST00000480658 CACNG4Q9UBN1 327 aa12.43□□□□□ -0.42
CCM2-213ENST00000480658 RAPGEFL1Q9UHV5 662 aa12.43□□□□□ -0.42
CCM2-213ENST00000480658 CPSF3Q9UKF6 684 aaKnown RBP12.43□□□□□ -0.42
CCM2-213ENST00000480658 AGO2Q9UKV8 859 aaKnown RBP12.43□□□□□ -0.42
CCM2-213ENST00000480658 STYXL1Q9Y6J8 313 aa12.43□□□□□ -0.42
CCM2-213ENST00000480658 CITO14578 2027 aa12.43□□□□□ -0.42
CCM2-213ENST00000480658 C2orf16Q68DN1 1984 aa12.42□□□□□ -0.42
CCM2-213ENST00000480658 SPTLC2O15270 562 aa12.42□□□□□ -0.42
CCM2-213ENST00000480658 FAM189A1O60320 539 aa12.42□□□□□ -0.42
CCM2-213ENST00000480658 GCNT3O95395 438 aa12.42□□□□□ -0.42
CCM2-213ENST00000480658 PTPN2P17706 415 aa12.42□□□□□ -0.42
CCM2-213ENST00000480658 GARTP22102 1010 aa12.42□□□□□ -0.42
CCM2-213ENST00000480658 BRCC3P46736 316 aa12.42□□□□□ -0.42
CCM2-213ENST00000480658 MYBPC2Q14324 1141 aa12.42□□□□□ -0.42
CCM2-213ENST00000480658 ZBTB6Q15916 424 aa12.42□□□□□ -0.42
CCM2-213ENST00000480658 ENOX2Q16206 610 aaKnown RBP12.42□□□□□ -0.42
CCM2-213ENST00000480658 L1TD1Q5T7N2 865 aaKnown RBP12.42□□□□□ -0.42
CCM2-213ENST00000480658 CYP4A22Q5TCH4 519 aa12.42□□□□□ -0.42
CCM2-213ENST00000480658 KANK3Q6NY19 840 aa12.42□□□□□ -0.42
CCM2-213ENST00000480658 ARMCX5Q6P1M9 558 aa12.42□□□□□ -0.42
CCM2-213ENST00000480658 DSTYKQ6XUX3 929 aa12.42□□□□□ -0.42
CCM2-213ENST00000480658 GRASPQ7Z6J2 395 aaPredicted RBP12.42□□□□□ -0.42
CCM2-213ENST00000480658 METTL23Q86XA0 190 aa12.42□□□□□ -0.42
CCM2-213ENST00000480658 IQUBQ8NA54 791 aa12.42□□□□□ -0.42
CCM2-213ENST00000480658 C18orf25Q96B23 403 aaPredicted RBP12.42□□□□□ -0.42
CCM2-213ENST00000480658 GPR88Q9GZN0 384 aa12.42□□□□□ -0.42
CCM2-213ENST00000480658 CYP4F11Q9HBI6 524 aa12.42□□□□□ -0.42
CCM2-213ENST00000480658 ZMYM5Q9UJ78 669 aa12.42□□□□□ -0.42
CCM2-213ENST00000480658 FBXL5Q9UKA1 691 aa12.42□□□□□ -0.42
CCM2-213ENST00000480658 MRPS23Q9Y3D9 190 aaKnown RBP12.42□□□□□ -0.42
CCM2-213ENST00000480658 R3HCC1Q9Y3T6 440 aaKnown RBP12.42□□□□□ -0.42
CCM2-213ENST00000480658 FRMD3A2A2Y4 597 aa12.41□□□□□ -0.42
CCM2-213ENST00000480658 WDR27A2RRH5 827 aa12.41□□□□□ -0.42
CCM2-213ENST00000480658 CCL16O15467 120 aa12.41□□□□□ -0.42
CCM2-213ENST00000480658 GALR2O43603 387 aaPredicted RBP12.41□□□□□ -0.42
CCM2-213ENST00000480658 TBC1D4O60343 1298 aa12.41□□□□□ -0.42
CCM2-213ENST00000480658 IDEP14735 1019 aa12.41□□□□□ -0.42
CCM2-213ENST00000480658 AOC1P19801 751 aa12.41□□□□□ -0.42
CCM2-213ENST00000480658 SNRPFP62306 86 aaKnown RBP12.41□□□□□ -0.42
CCM2-213ENST00000480658 CEBPZQ03701 1054 aaKnown RBP12.41□□□□□ -0.42
CCM2-213ENST00000480658 GRIN1Q05586 938 aa12.41□□□□□ -0.42
CCM2-213ENST00000480658 HTR4Q13639 388 aa12.41□□□□□ -0.42
CCM2-213ENST00000480658 PDCD11Q14690 1871 aaKnown RBP12.41□□□□□ -0.42
CCM2-213ENST00000480658 SV2CQ496J9 727 aa12.41□□□□□ -0.42
CCM2-213ENST00000480658 CD300LGQ6UXG3 332 aa12.41□□□□□ -0.42
CCM2-213ENST00000480658 RSPO2Q6UXX9 243 aaPredicted RBP12.41□□□□□ -0.42
CCM2-213ENST00000480658 PDZD4Q76G19 769 aaPredicted RBP12.41□□□□□ -0.42
CCM2-213ENST00000480658 SFR1Q86XK3 245 aa12.41□□□□□ -0.42
CCM2-213ENST00000480658 KMT2EQ8IZD2 1858 aa12.41□□□□□ -0.42
CCM2-213ENST00000480658 SYCP3Q8IZU3 236 aa12.41□□□□□ -0.42
CCM2-213ENST00000480658 LINC00301Q8NCQ3 95 aa12.41□□□□□ -0.42
CCM2-213ENST00000480658 C2orf15Q8WU43 125 aaKnown RBP12.41□□□□□ -0.42
CCM2-213ENST00000480658 CACTINQ8WUQ7 758 aaKnown RBP12.41□□□□□ -0.42
CCM2-213ENST00000480658 FGF13Q92913 245 aa12.41□□□□□ -0.42
CCM2-213ENST00000480658 E2F7Q96AV8 911 aa12.41□□□□□ -0.42
CCM2-213ENST00000480658 USP28Q96RU2 1077 aa12.41□□□□□ -0.42
CCM2-213ENST00000480658 MYADMQ96S97 322 aa12.41□□□□□ -0.42
CCM2-213ENST00000480658 FIZ1Q96SL8 496 aa12.41□□□□□ -0.42
CCM2-213ENST00000480658 CXCL16Q9H2A7 254 aa12.41□□□□□ -0.42
CCM2-213ENST00000480658 KIAA1586Q9HCI6 787 aa12.41□□□□□ -0.42
CCM2-213ENST00000480658 TUBGCP4Q9UGJ1 667 aa12.41□□□□□ -0.42
CCM2-213ENST00000480658 ASB3Q9Y575 518 aa12.41□□□□□ -0.42
CCM2-213ENST00000480658 INSL5Q9Y5Q6 135 aa12.41□□□□□ -0.42
CCM2-213ENST00000480658 UBE4BO95155 1302 aa12.4□□□□□ -0.42
CCM2-213ENST00000480658 LACTBL1A8MY62 500 aa12.4□□□□□ -0.42
CCM2-213ENST00000480658 I3L4J1 428 aa12.4□□□□□ -0.42
CCM2-213ENST00000480658 CUTAO60888 179 aa12.4□□□□□ -0.42
CCM2-213ENST00000480658 N4BP1O75113 896 aaKnown RBP12.4□□□□□ -0.42
CCM2-213ENST00000480658 PPP1R37O75864 691 aa12.4□□□□□ -0.42
CCM2-213ENST00000480658 NMT1P30419 496 aaKnown RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms