RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 MYO6Q9UM54 1294 aa18.91■□□□□ 0.62
UPF3A-206ENST00000480362 NUB1Q9Y5A7 615 aa18.91■□□□□ 0.62
UPF3A-206ENST00000480362 PCDHB7Q9Y5E2 793 aa18.91■□□□□ 0.62
UPF3A-206ENST00000480362 DNAH12Q6ZR08 3092 aa18.91■□□□□ 0.62
UPF3A-206ENST00000480362 TET1Q8NFU7 2136 aa18.91■□□□□ 0.62
UPF3A-206ENST00000480362 PDCD11Q14690 1871 aaKnown RBP18.9■□□□□ 0.62
UPF3A-206ENST00000480362 ATICP31939 592 aa18.9■□□□□ 0.62
UPF3A-206ENST00000480362 JAM2P57087 298 aa18.9■□□□□ 0.62
UPF3A-206ENST00000480362 SOX4Q06945 474 aaPredicted RBP18.9■□□□□ 0.62
UPF3A-206ENST00000480362 SFMBT2Q5VUG0 894 aa18.9■□□□□ 0.62
UPF3A-206ENST00000480362 FAM81BQ96LP2 452 aa18.9■□□□□ 0.62
UPF3A-206ENST00000480362 KREMEN1Q96MU8 473 aa18.9■□□□□ 0.62
UPF3A-206ENST00000480362 SLC38A7Q9NVC3 462 aa18.9■□□□□ 0.62
UPF3A-206ENST00000480362 ZNHIT6Q9NWK9 470 aaKnown RBP18.9■□□□□ 0.62
UPF3A-206ENST00000480362 PRKAG2Q9UGJ0 569 aa18.9■□□□□ 0.62
UPF3A-206ENST00000480362 INPP5FQ9Y2H2 1132 aa18.9■□□□□ 0.62
UPF3A-206ENST00000480362 ANO9A1A5B4 782 aa18.89■□□□□ 0.61
UPF3A-206ENST00000480362 POMCP01189 267 aa18.89■□□□□ 0.61
UPF3A-206ENST00000480362 FGFR1P11362 822 aa18.89■□□□□ 0.61
UPF3A-206ENST00000480362 HNRNPH3P31942 346 aaKnown RBP18.89■□□□□ 0.61
UPF3A-206ENST00000480362 STAT1P42224 750 aa18.89■□□□□ 0.61
UPF3A-206ENST00000480362 CCZ1BP86790 482 aa18.89■□□□□ 0.61
UPF3A-206ENST00000480362 CCZ1P86791 482 aaPredicted RBP18.89■□□□□ 0.61
UPF3A-206ENST00000480362 GCNT1Q02742 428 aa18.89■□□□□ 0.61
UPF3A-206ENST00000480362 NAB2Q15742 525 aa18.89■□□□□ 0.61
UPF3A-206ENST00000480362 CLLU1OSQ5K130 101 aa18.89■□□□□ 0.61
UPF3A-206ENST00000480362 C9orf57Q5W0N0 161 aa18.89■□□□□ 0.61
UPF3A-206ENST00000480362 E4F1Q66K89 784 aaPredicted RBP18.89■□□□□ 0.61
UPF3A-206ENST00000480362 WDR59Q6PJI9 974 aa18.89■□□□□ 0.61
UPF3A-206ENST00000480362 GLB1LQ6UWU2 654 aa18.89■□□□□ 0.61
UPF3A-206ENST00000480362 ENOSF1Q7L5Y1 443 aa18.89■□□□□ 0.61
UPF3A-206ENST00000480362 GPIHBP1Q8IV16 184 aa18.89■□□□□ 0.61
UPF3A-206ENST00000480362 TMEM139Q8IV31 216 aa18.89■□□□□ 0.61
UPF3A-206ENST00000480362 C7orf61Q8IZ16 206 aa18.89■□□□□ 0.61
UPF3A-206ENST00000480362 RPUSD2Q8IZ73 545 aaKnown RBP18.89■□□□□ 0.61
UPF3A-206ENST00000480362 SYN2Q92777 582 aaPredicted RBP18.89■□□□□ 0.61
UPF3A-206ENST00000480362 HPDLQ96IR7 371 aa18.89■□□□□ 0.61
UPF3A-206ENST00000480362 BAG1Q99933 345 aaPredicted RBP18.89■□□□□ 0.61
UPF3A-206ENST00000480362 GPR88Q9GZN0 384 aa18.89■□□□□ 0.61
UPF3A-206ENST00000480362 GOLGA2P5Q9HBQ8 144 aa18.89■□□□□ 0.61
UPF3A-206ENST00000480362 LRFN2Q9ULH4 789 aa18.89■□□□□ 0.61
UPF3A-206ENST00000480362 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.89■□□□□ 0.61
UPF3A-206ENST00000480362 ALPK3Q96L96 1907 aa18.89■□□□□ 0.61
UPF3A-206ENST00000480362 F8VZ95 297 aa18.88■□□□□ 0.61
UPF3A-206ENST00000480362 FOXN3O00409 490 aaPredicted RBP18.88■□□□□ 0.61
UPF3A-206ENST00000480362 PIRO00625 290 aa18.88■□□□□ 0.61
UPF3A-206ENST00000480362 PPEF2O14830 753 aa18.88■□□□□ 0.61
UPF3A-206ENST00000480362 INPPL1O15357 1258 aa18.88■□□□□ 0.61
UPF3A-206ENST00000480362 LRPAP1P30533 357 aa18.88■□□□□ 0.61
UPF3A-206ENST00000480362 CUL2Q13617 745 aa18.88■□□□□ 0.61
UPF3A-206ENST00000480362 ZNF667Q5HYK9 610 aa18.88■□□□□ 0.61
UPF3A-206ENST00000480362 CCDC112Q8NEF3 446 aa18.88■□□□□ 0.61
UPF3A-206ENST00000480362 HTATIP2Q9BUP3 242 aa18.88■□□□□ 0.61
UPF3A-206ENST00000480362 NIF3L1Q9GZT8 377 aa18.88■□□□□ 0.61
UPF3A-206ENST00000480362 VRTNQ9H8Y1 702 aa18.88■□□□□ 0.61
UPF3A-206ENST00000480362 AIPL1Q9NZN9 384 aa18.88■□□□□ 0.61
UPF3A-206ENST00000480362 PCDH10Q9P2E7 1040 aa18.88■□□□□ 0.61
UPF3A-206ENST00000480362 NXF1Q9UBU9 619 aaKnown RBP18.88■□□□□ 0.61
UPF3A-206ENST00000480362 ABHD14A-ACY1A0A1B0GW23 586 aa18.87■□□□□ 0.61
UPF3A-206ENST00000480362 NRDCO43847 1150 aa18.87■□□□□ 0.61
UPF3A-206ENST00000480362 STAU1O95793 577 aaKnown RBP18.87■□□□□ 0.61
UPF3A-206ENST00000480362 PNMA6AP0CW24 399 aaPredicted RBP18.87■□□□□ 0.61
UPF3A-206ENST00000480362 ACRP10323 421 aa18.87■□□□□ 0.61
UPF3A-206ENST00000480362 SKILP12757 684 aa18.87■□□□□ 0.61
UPF3A-206ENST00000480362 FECHP22830 423 aa18.87■□□□□ 0.61
UPF3A-206ENST00000480362 TBXAS1P24557 533 aaPredicted RBP18.87■□□□□ 0.61
UPF3A-206ENST00000480362 SOX5P35711 763 aa18.87■□□□□ 0.61
UPF3A-206ENST00000480362 MYO1EQ12965 1108 aa18.87■□□□□ 0.61
UPF3A-206ENST00000480362 GRIK3Q13003 919 aa18.87■□□□□ 0.61
UPF3A-206ENST00000480362 ASIC2Q16515 512 aa18.87■□□□□ 0.61
UPF3A-206ENST00000480362 MEA1Q16626 185 aa18.87■□□□□ 0.61
UPF3A-206ENST00000480362 WDR72Q3MJ13 1102 aa18.87■□□□□ 0.61
UPF3A-206ENST00000480362 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.87■□□□□ 0.61
UPF3A-206ENST00000480362 CRIPAKQ8N1N5 446 aa18.87■□□□□ 0.61
UPF3A-206ENST00000480362 LRRC52Q8N7C0 313 aa18.87■□□□□ 0.61
UPF3A-206ENST00000480362 URGCPQ8TCY9 931 aa18.87■□□□□ 0.61
UPF3A-206ENST00000480362 SHC3Q92529 594 aa18.87■□□□□ 0.61
UPF3A-206ENST00000480362 CHP1Q99653 195 aa18.87■□□□□ 0.61
UPF3A-206ENST00000480362 ARID3AQ99856 593 aa18.87■□□□□ 0.61
UPF3A-206ENST00000480362 IL23AQ9NPF7 189 aa18.87■□□□□ 0.61
UPF3A-206ENST00000480362 RNF216Q9NWF9 866 aaPredicted RBP18.87■□□□□ 0.61
UPF3A-206ENST00000480362 POLIQ9UNA4 740 aa18.87■□□□□ 0.61
UPF3A-206ENST00000480362 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.87■□□□□ 0.61
UPF3A-206ENST00000480362 GFPT2O94808 682 aa18.86■□□□□ 0.61
UPF3A-206ENST00000480362 PFKMP08237 780 aa18.86■□□□□ 0.61
UPF3A-206ENST00000480362 FERP16591 822 aa18.86■□□□□ 0.61
UPF3A-206ENST00000480362 USP8P40818 1118 aa18.86■□□□□ 0.61
UPF3A-206ENST00000480362 ARID5AQ03989 594 aa18.86■□□□□ 0.61
UPF3A-206ENST00000480362 NOMO2Q5JPE7 1267 aa18.86■□□□□ 0.61
UPF3A-206ENST00000480362 CYP26C1Q6V0L0 522 aa18.86■□□□□ 0.61
UPF3A-206ENST00000480362 IRF2BP2Q7Z5L9 587 aa18.86■□□□□ 0.61
UPF3A-206ENST00000480362 NPAS4Q8IUM7 802 aa18.86■□□□□ 0.61
UPF3A-206ENST00000480362 TMTC1Q8IUR5 882 aa18.86■□□□□ 0.61
UPF3A-206ENST00000480362 BADQ92934 168 aa18.86■□□□□ 0.61
UPF3A-206ENST00000480362 JAKMIP2Q96AA8 810 aa18.86■□□□□ 0.61
UPF3A-206ENST00000480362 KANSL3Q9P2N6 904 aa18.86■□□□□ 0.61
UPF3A-206ENST00000480362 CCDC85CA6NKD9 419 aa18.85■□□□□ 0.61
UPF3A-206ENST00000480362 EVI5O60447 810 aa18.85■□□□□ 0.61
UPF3A-206ENST00000480362 RPL9P32969 192 aaKnown RBP18.85■□□□□ 0.61
UPF3A-206ENST00000480362 ASPAP45381 313 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms