RNA–Protein interactions for RNA: ENST00000480226.5

ITGB1-212, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 585 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-212ENST00000480226 LRIT1Q9P2V4 623 aa5.66□□□□□ -1.5
ITGB1-212ENST00000480226 NOP58Q9Y2X3 529 aaKnown RBP5.66□□□□□ -1.5
ITGB1-212ENST00000480226 TNFRSF18Q9Y5U5 241 aa5.66□□□□□ -1.5
ITGB1-212ENST00000480226 MYADML2A6NDP7 307 aa5.65□□□□□ -1.5
ITGB1-212ENST00000480226 PRSS23O95084 383 aa5.65□□□□□ -1.5
ITGB1-212ENST00000480226 DDCP20711 480 aa5.65□□□□□ -1.5
ITGB1-212ENST00000480226 CREMQ03060 361 aa5.65□□□□□ -1.5
ITGB1-212ENST00000480226 MTM1Q13496 603 aa5.65□□□□□ -1.5
ITGB1-212ENST00000480226 ZNF169Q14929 603 aaPredicted RBP5.65□□□□□ -1.5
ITGB1-212ENST00000480226 CYP2A13Q16696 494 aa5.65□□□□□ -1.5
ITGB1-212ENST00000480226 PPM1NQ8N819 430 aa5.65□□□□□ -1.5
ITGB1-212ENST00000480226 BOLLQ8N9W6 283 aaKnown RBP5.65□□□□□ -1.5
ITGB1-212ENST00000480226 NLGN4YQ8NFZ3 816 aaPredicted RBP5.65□□□□□ -1.5
ITGB1-212ENST00000480226 ZCRB1Q8TBF4 217 aaKnown RBP5.65□□□□□ -1.5
ITGB1-212ENST00000480226 NRG4Q8WWG1 115 aa5.65□□□□□ -1.5
ITGB1-212ENST00000480226 PTCD3Q96EY7 689 aaKnown RBP5.65□□□□□ -1.5
ITGB1-212ENST00000480226 MARS2Q96GW9 593 aaKnown RBP5.65□□□□□ -1.5
ITGB1-212ENST00000480226 MED15Q96RN5 788 aa5.65□□□□□ -1.5
ITGB1-212ENST00000480226 PRDM13Q9H4Q3 707 aa5.65□□□□□ -1.5
ITGB1-212ENST00000480226 MKS1Q9NXB0 559 aa5.65□□□□□ -1.5
ITGB1-212ENST00000480226 USP25Q9UHP3 1055 aa5.65□□□□□ -1.5
ITGB1-212ENST00000480226 RUVBL1Q9Y265 456 aaKnown RBP5.65□□□□□ -1.5
ITGB1-212ENST00000480226 CCDC78A2IDD5 438 aa5.64□□□□□ -1.51
ITGB1-212ENST00000480226 NDUFS2O75306 463 aa5.64□□□□□ -1.51
ITGB1-212ENST00000480226 AMY1AP04745 511 aa5.64□□□□□ -1.51
ITGB1-212ENST00000480226 PTH2RP49190 550 aa5.64□□□□□ -1.51
ITGB1-212ENST00000480226 RARRES1P49788 294 aa5.64□□□□□ -1.51
ITGB1-212ENST00000480226 VAV2P52735 878 aa5.64□□□□□ -1.51
ITGB1-212ENST00000480226 CLUL1Q15846 466 aa5.64□□□□□ -1.51
ITGB1-212ENST00000480226 SSH1Q8WYL5 1049 aa5.64□□□□□ -1.51
ITGB1-212ENST00000480226 NACC2Q96BF6 587 aa5.64□□□□□ -1.51
ITGB1-212ENST00000480226 AIFM2Q9BRQ8 373 aa5.64□□□□□ -1.51
ITGB1-212ENST00000480226 UNKLQ9H9P5 680 aaKnown RBP5.64□□□□□ -1.51
ITGB1-212ENST00000480226 KIAA1586Q9HCI6 787 aa5.64□□□□□ -1.51
ITGB1-212ENST00000480226 ALG13Q9NP73 1137 aaKnown RBP5.64□□□□□ -1.51
ITGB1-212ENST00000480226 HOMER2Q9NSB8 354 aa5.64□□□□□ -1.51
ITGB1-212ENST00000480226 MYBBP1AQ9BQG0 1328 aaKnown RBP5.64□□□□□ -1.51
ITGB1-212ENST00000480226 SALL3Q9BXA9 1300 aa5.64□□□□□ -1.51
ITGB1-212ENST00000480226 TCRBV7S2A1N4TA0A589 114 aa5.63□□□□□ -1.51
ITGB1-212ENST00000480226 SHTN1A0MZ66 631 aa5.63□□□□□ -1.51
ITGB1-212ENST00000480226 KLHL33A6NCF5 533 aa5.63□□□□□ -1.51
ITGB1-212ENST00000480226 KIAA0391O15091 583 aaKnown RBP5.63□□□□□ -1.51
ITGB1-212ENST00000480226 EDNRBP24530 442 aa5.63□□□□□ -1.51
ITGB1-212ENST00000480226 IL12RB1P42701 662 aa5.63□□□□□ -1.51
ITGB1-212ENST00000480226 WASP42768 502 aa5.63□□□□□ -1.51
ITGB1-212ENST00000480226 KRT85P78386 507 aa5.63□□□□□ -1.51
ITGB1-212ENST00000480226 SIM1P81133 766 aaPredicted RBP5.63□□□□□ -1.51
ITGB1-212ENST00000480226 MRPS35P82673 323 aaKnown RBP5.63□□□□□ -1.51
ITGB1-212ENST00000480226 PTPN21Q16825 1174 aa5.63□□□□□ -1.51
ITGB1-212ENST00000480226 ZGPATQ8N5A5 531 aaKnown RBP5.63□□□□□ -1.51
ITGB1-212ENST00000480226 FAM98AQ8NCA5 519 aaKnown RBP5.63□□□□□ -1.51
ITGB1-212ENST00000480226 TBC1D15Q8TC07 691 aa5.63□□□□□ -1.51
ITGB1-212ENST00000480226 TEKT5Q96M29 485 aa5.63□□□□□ -1.51
ITGB1-212ENST00000480226 SMAD5Q99717 465 aaKnown RBP5.63□□□□□ -1.51
ITGB1-212ENST00000480226 SPATA5L1Q9BVQ7 753 aa5.63□□□□□ -1.51
ITGB1-212ENST00000480226 SAP30BPQ9UHR5 308 aaKnown RBP5.63□□□□□ -1.51
ITGB1-212ENST00000480226 SERPINB13Q9UIV8 391 aa5.63□□□□□ -1.51
ITGB1-212ENST00000480226 CDHR4A6H8M9 788 aa5.62□□□□□ -1.51
ITGB1-212ENST00000480226 ZRANB2O95218 330 aaKnown RBP eCLIP5.62□□□□□ -1.51
ITGB1-212ENST00000480226 C1RP00736 705 aa5.62□□□□□ -1.51
ITGB1-212ENST00000480226 ZNF37AP17032 561 aaPredicted RBP5.62□□□□□ -1.51
ITGB1-212ENST00000480226 LMO1P25800 156 aa5.62□□□□□ -1.51
ITGB1-212ENST00000480226 NOMO3P69849 1222 aa5.62□□□□□ -1.51
ITGB1-212ENST00000480226 ATP8B2P98198 1209 aa5.62□□□□□ -1.51
ITGB1-212ENST00000480226 ACAP2Q15057 778 aa5.62□□□□□ -1.51
ITGB1-212ENST00000480226 NOMO2Q5JPE7 1267 aa5.62□□□□□ -1.51
ITGB1-212ENST00000480226 DACT2Q5SW24 774 aa5.62□□□□□ -1.51
ITGB1-212ENST00000480226 RHOT1Q8IXI2 618 aa5.62□□□□□ -1.51
ITGB1-212ENST00000480226 LNX2Q8N448 690 aa5.62□□□□□ -1.51
ITGB1-212ENST00000480226 LRFN3Q9BTN0 628 aa5.62□□□□□ -1.51
ITGB1-212ENST00000480226 KRTAP9-8Q9BYQ0 159 aa5.62□□□□□ -1.51
ITGB1-212ENST00000480226 SLC13A1Q9BZW2 595 aa5.62□□□□□ -1.51
ITGB1-212ENST00000480226 C11orf54Q9H0W9 315 aaPredicted RBP5.62□□□□□ -1.51
ITGB1-212ENST00000480226 KCTD5Q9NXV2 234 aa5.62□□□□□ -1.51
ITGB1-212ENST00000480226 INTUQ9ULD6 942 aa5.62□□□□□ -1.51
ITGB1-212ENST00000480226 LIMCH1Q9UPQ0 1083 aa5.62□□□□□ -1.51
ITGB1-212ENST00000480226 IPPQ9Y573 584 aa5.62□□□□□ -1.51
ITGB1-212ENST00000480226 TRGV11A0A075B6L2 103 aa5.61□□□□□ -1.51
ITGB1-212ENST00000480226 XPOTO43592 962 aaKnown RBP5.61□□□□□ -1.51
ITGB1-212ENST00000480226 IGLV2-14P01704 120 aa5.61□□□□□ -1.51
ITGB1-212ENST00000480226 CACNA2D1P54289 1103 aa5.61□□□□□ -1.51
ITGB1-212ENST00000480226 CTXN1P60606 82 aa5.61□□□□□ -1.51
ITGB1-212ENST00000480226 COLEC12Q5KU26 742 aa5.61□□□□□ -1.51
ITGB1-212ENST00000480226 ZKSCAN2Q63HK3 967 aa5.61□□□□□ -1.51
ITGB1-212ENST00000480226 SP5Q6BEB4 398 aaPredicted RBP5.61□□□□□ -1.51
ITGB1-212ENST00000480226 ACTRT2Q8TDY3 377 aa5.61□□□□□ -1.51
ITGB1-212ENST00000480226 HEPHQ9BQS7 1158 aa5.61□□□□□ -1.51
ITGB1-212ENST00000480226 FOXJ2Q9P0K8 574 aa5.61□□□□□ -1.51
ITGB1-212ENST00000480226 HSFX1Q9UBD0 423 aa5.61□□□□□ -1.51
ITGB1-212ENST00000480226 HTRA2O43464 458 aaPredicted RBP5.6□□□□□ -1.51
ITGB1-212ENST00000480226 PEX1O43933 1283 aa5.6□□□□□ -1.51
ITGB1-212ENST00000480226 HAUS5O94927 633 aa5.6□□□□□ -1.51
ITGB1-212ENST00000480226 MTHFD1P11586 935 aaKnown RBP5.6□□□□□ -1.51
ITGB1-212ENST00000480226 GEN1Q17RS7 908 aa5.6□□□□□ -1.51
ITGB1-212ENST00000480226 C3orf36Q3SXR2 165 aa5.6□□□□□ -1.51
ITGB1-212ENST00000480226 ZNF362Q5T0B9 420 aaPredicted RBP5.6□□□□□ -1.51
ITGB1-212ENST00000480226 MIGA2Q7L4E1 593 aa5.6□□□□□ -1.51
ITGB1-212ENST00000480226 RSPH3Q86UC2 560 aa5.6□□□□□ -1.51
ITGB1-212ENST00000480226 COA7Q96BR5 231 aa5.6□□□□□ -1.51
ITGB1-212ENST00000480226 PDLIM2Q96JY6 352 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms