RNA–Protein interactions for RNA: ENST00000480067.1

CLDN11-205, Transcript of claudin 11, humanhuman

TSL 1 (best)

Gene CLDN11, Length 1,589 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-205ENST00000480067 NUB1Q9Y5A7 615 aa12.07□□□□□ -0.48
CLDN11-205ENST00000480067 CDH23Q9H251 3354 aa12.06□□□□□ -0.48
CLDN11-205ENST00000480067 ANO9A1A5B4 782 aa12.06□□□□□ -0.48
CLDN11-205ENST00000480067 PIRO00625 290 aa12.06□□□□□ -0.48
CLDN11-205ENST00000480067 CLSTN1O94985 981 aa12.06□□□□□ -0.48
CLDN11-205ENST00000480067 CST3P01034 146 aaPredicted RBP12.06□□□□□ -0.48
CLDN11-205ENST00000480067 DNAJB2P25686 324 aa12.06□□□□□ -0.48
CLDN11-205ENST00000480067 BMPR1AP36894 532 aa12.06□□□□□ -0.48
CLDN11-205ENST00000480067 PNPLA4P41247 253 aa12.06□□□□□ -0.48
CLDN11-205ENST00000480067 FMO5P49326 533 aa12.06□□□□□ -0.48
CLDN11-205ENST00000480067 MYO1EQ12965 1108 aa12.06□□□□□ -0.48
CLDN11-205ENST00000480067 CBWD6Q4V339 395 aa12.06□□□□□ -0.48
CLDN11-205ENST00000480067 CBWD3Q5JTY5 395 aa12.06□□□□□ -0.48
CLDN11-205ENST00000480067 CBWD5Q5RIA9 395 aa12.06□□□□□ -0.48
CLDN11-205ENST00000480067 PPP2R2DQ66LE6 453 aa12.06□□□□□ -0.48
CLDN11-205ENST00000480067 C15orf39Q6ZRI6 1047 aa12.06□□□□□ -0.48
CLDN11-205ENST00000480067 TMEM130Q8N3G9 435 aa12.06□□□□□ -0.48
CLDN11-205ENST00000480067 COLGALT1Q8NBJ5 622 aa12.06□□□□□ -0.48
CLDN11-205ENST00000480067 CCDC150Q8NCX0 1101 aa12.06□□□□□ -0.48
CLDN11-205ENST00000480067 FBXL13Q8NEE6 735 aa12.06□□□□□ -0.48
CLDN11-205ENST00000480067 TGS1Q96RS0 853 aaKnown RBP12.06□□□□□ -0.48
CLDN11-205ENST00000480067 RBSNQ9H1K0 784 aa12.06□□□□□ -0.48
CLDN11-205ENST00000480067 NKX2-4Q9H2Z4 354 aa12.06□□□□□ -0.48
CLDN11-205ENST00000480067 SPG21Q9NZD8 308 aa12.06□□□□□ -0.48
CLDN11-205ENST00000480067 SIX4Q9UIU6 781 aa12.06□□□□□ -0.48
CLDN11-205ENST00000480067 CITO14578 2027 aa12.05□□□□□ -0.48
CLDN11-205ENST00000480067 PMM2O15305 246 aa12.05□□□□□ -0.48
CLDN11-205ENST00000480067 P4HA2O15460 535 aa12.05□□□□□ -0.48
CLDN11-205ENST00000480067 TRAPPC3O43617 180 aa12.05□□□□□ -0.48
CLDN11-205ENST00000480067 PAX3P23760 479 aa12.05□□□□□ -0.48
CLDN11-205ENST00000480067 CTNNB1P35222 781 aa12.05□□□□□ -0.48
CLDN11-205ENST00000480067 PPM1AP35813 382 aa12.05□□□□□ -0.48
CLDN11-205ENST00000480067 PIK3CAP42336 1068 aa12.05□□□□□ -0.48
CLDN11-205ENST00000480067 COPB1P53618 953 aaKnown RBP12.05□□□□□ -0.48
CLDN11-205ENST00000480067 LILRA4P59901 499 aa12.05□□□□□ -0.48
CLDN11-205ENST00000480067 MYL7Q01449 175 aa12.05□□□□□ -0.48
CLDN11-205ENST00000480067 TAP1Q03518 808 aa12.05□□□□□ -0.48
CLDN11-205ENST00000480067 KRT17Q04695 432 aa12.05□□□□□ -0.48
CLDN11-205ENST00000480067 SGSM1Q2NKQ1 1148 aa12.05□□□□□ -0.48
CLDN11-205ENST00000480067 FILIP1LQ4L180 1135 aa12.05□□□□□ -0.48
CLDN11-205ENST00000480067 MIIPQ5JXC2 388 aa12.05□□□□□ -0.48
CLDN11-205ENST00000480067 LRRC52Q8N7C0 313 aa12.05□□□□□ -0.48
CLDN11-205ENST00000480067 CXorf38Q8TB03 319 aa12.05□□□□□ -0.48
CLDN11-205ENST00000480067 TAS1R2Q8TE23 839 aa12.05□□□□□ -0.48
CLDN11-205ENST00000480067 HASPINQ8TF76 798 aa12.05□□□□□ -0.48
CLDN11-205ENST00000480067 TIFAQ96CG3 184 aa12.05□□□□□ -0.48
CLDN11-205ENST00000480067 TMEM169Q96HH4 297 aa12.05□□□□□ -0.48
CLDN11-205ENST00000480067 HPDLQ96IR7 371 aa12.05□□□□□ -0.48
CLDN11-205ENST00000480067 ZNF560Q96MR9 790 aa12.05□□□□□ -0.48
CLDN11-205ENST00000480067 SAMD11Q96NU1 681 aa12.05□□□□□ -0.48
CLDN11-205ENST00000480067 PLVAPQ9BX97 442 aa12.05□□□□□ -0.48
CLDN11-205ENST00000480067 IMPG2Q9BZV3 1241 aa12.05□□□□□ -0.48
CLDN11-205ENST00000480067 RAB20Q9NX57 234 aa12.05□□□□□ -0.48
CLDN11-205ENST00000480067 MTUS1Q9ULD2 1270 aa12.05□□□□□ -0.48
CLDN11-205ENST00000480067 F8W810 466 aa12.05□□□□□ -0.48
CLDN11-205ENST00000480067 PPEF2O14830 753 aa12.05□□□□□ -0.48
CLDN11-205ENST00000480067 KIF4AO95239 1232 aa12.05□□□□□ -0.48
CLDN11-205ENST00000480067 VNN1O95497 513 aa12.05□□□□□ -0.48
CLDN11-205ENST00000480067 HLA-DRAP01903 254 aa12.05□□□□□ -0.48
CLDN11-205ENST00000480067 LINC00271P0C7V0 271 aa12.05□□□□□ -0.48
CLDN11-205ENST00000480067 ATICP31939 592 aa12.05□□□□□ -0.48
CLDN11-205ENST00000480067 TAF6P49848 677 aa12.05□□□□□ -0.48
CLDN11-205ENST00000480067 MYL6P60660 151 aa12.05□□□□□ -0.48
CLDN11-205ENST00000480067 EPC2Q52LR7 807 aa12.05□□□□□ -0.48
CLDN11-205ENST00000480067 WDR44Q5JSH3 913 aa12.05□□□□□ -0.48
CLDN11-205ENST00000480067 FKBP15Q5T1M5 1219 aa12.05□□□□□ -0.48
CLDN11-205ENST00000480067 SCARA3Q6AZY7 606 aa12.05□□□□□ -0.48
CLDN11-205ENST00000480067 C3orf58Q8NDZ4 430 aa12.05□□□□□ -0.48
CLDN11-205ENST00000480067 IGSF21Q96ID5 467 aa12.05□□□□□ -0.48
CLDN11-205ENST00000480067 C17orf80Q9BSJ5 609 aa12.05□□□□□ -0.48
CLDN11-205ENST00000480067 PUF60Q9UHX1 559 aaKnown RBP12.05□□□□□ -0.48
CLDN11-205ENST00000480067 ADAM28Q9UKQ2 775 aa12.05□□□□□ -0.48
CLDN11-205ENST00000480067 COQ4Q9Y3A0 265 aa12.05□□□□□ -0.48
CLDN11-205ENST00000480067 TRIOBPQ9H2D6 2365 aa12.04□□□□□ -0.48
CLDN11-205ENST00000480067 KPNA7A9QM74 516 aa12.04□□□□□ -0.48
CLDN11-205ENST00000480067 TMEM189-UBE2V1I3L0A0 370 aa12.04□□□□□ -0.48
CLDN11-205ENST00000480067 FGF18O76093 207 aa12.04□□□□□ -0.48
CLDN11-205ENST00000480067 ARHGEF15O94989 841 aa12.04□□□□□ -0.48
CLDN11-205ENST00000480067 ITGB1P05556 798 aa12.04□□□□□ -0.48
CLDN11-205ENST00000480067 RB1P06400 928 aa12.04□□□□□ -0.48
CLDN11-205ENST00000480067 IGFBP6P24592 240 aaPredicted RBP12.04□□□□□ -0.48
CLDN11-205ENST00000480067 ERVK-21P61565 698 aa12.04□□□□□ -0.48
CLDN11-205ENST00000480067 FANCCQ00597 558 aa12.04□□□□□ -0.48
CLDN11-205ENST00000480067 PLCB2Q00722 1185 aa12.04□□□□□ -0.48
CLDN11-205ENST00000480067 UBXN1Q04323 297 aa12.04□□□□□ -0.48
CLDN11-205ENST00000480067 EXOC3L4Q17RC7 722 aa12.04□□□□□ -0.48
CLDN11-205ENST00000480067 ZNF699Q32M78 642 aa12.04□□□□□ -0.48
CLDN11-205ENST00000480067 WDR72Q3MJ13 1102 aa12.04□□□□□ -0.48
CLDN11-205ENST00000480067 SV2CQ496J9 727 aa12.04□□□□□ -0.48
CLDN11-205ENST00000480067 DSTYKQ6XUX3 929 aa12.04□□□□□ -0.48
CLDN11-205ENST00000480067 GBP6Q6ZN66 633 aa12.04□□□□□ -0.48
CLDN11-205ENST00000480067 APTXQ7Z2E3 356 aaKnown RBP12.04□□□□□ -0.48
CLDN11-205ENST00000480067 TMEM173Q86WV6 379 aaPredicted RBP12.04□□□□□ -0.48
CLDN11-205ENST00000480067 SLC39A11Q8N1S5 342 aa12.04□□□□□ -0.48
CLDN11-205ENST00000480067 KLHL23Q8NBE8 558 aa12.04□□□□□ -0.48
CLDN11-205ENST00000480067 TAF4BQ92750 862 aa12.04□□□□□ -0.48
CLDN11-205ENST00000480067 CRACR2AQ9BSW2 395 aa12.04□□□□□ -0.48
CLDN11-205ENST00000480067 C11orf84Q9BUA3 381 aaPredicted RBP12.04□□□□□ -0.48
CLDN11-205ENST00000480067 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.04□□□□□ -0.48
CLDN11-205ENST00000480067 MARCH5Q9NX47 278 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms