RNA–Protein interactions for RNA: ENST00000479988.1

CPS1-207, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best)

Gene CPS1, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-207ENST00000479988 CDR2LQ86X02 465 aaPredicted RBP6.34□□□□□ -1.39
CPS1-207ENST00000479988 ARFGAP2Q8N6H7 521 aa6.34□□□□□ -1.39
CPS1-207ENST00000479988 DBF4BQ8NFT6 615 aa6.34□□□□□ -1.39
CPS1-207ENST00000479988 RSPH1Q8WYR4 309 aa6.34□□□□□ -1.39
CPS1-207ENST00000479988 LENG1Q96BZ8 264 aaPredicted RBP6.34□□□□□ -1.39
CPS1-207ENST00000479988 NCAPGQ9BPX3 1015 aa6.34□□□□□ -1.39
CPS1-207ENST00000479988 HSD3B7Q9H2F3 369 aa6.34□□□□□ -1.39
CPS1-207ENST00000479988 CHST12Q9NRB3 414 aa6.34□□□□□ -1.39
CPS1-207ENST00000479988 TJP2Q9UDY2 1190 aa6.34□□□□□ -1.39
CPS1-207ENST00000479988 ST3GAL5Q9UNP4 418 aa6.34□□□□□ -1.39
CPS1-207ENST00000479988 PHF20L1A8MW92 1017 aa6.34□□□□□ -1.39
CPS1-207ENST00000479988 TUFMP49411 452 aaKnown RBP6.34□□□□□ -1.39
CPS1-207ENST00000479988 KCNH2Q12809 1159 aa6.34□□□□□ -1.39
CPS1-207ENST00000479988 MYBPC2Q14324 1141 aa6.34□□□□□ -1.39
CPS1-207ENST00000479988 IL17AQ16552 155 aa6.34□□□□□ -1.39
CPS1-207ENST00000479988 PLPP4Q5VZY2 271 aa6.34□□□□□ -1.39
CPS1-207ENST00000479988 MAATS1Q7Z4T9 603 aa6.34□□□□□ -1.39
CPS1-207ENST00000479988 CROCCP2Q86T23 111 aa6.34□□□□□ -1.39
CPS1-207ENST00000479988 HNRNPLLQ8WVV9 542 aaKnown RBP6.34□□□□□ -1.39
CPS1-207ENST00000479988 TRIM11Q96F44 468 aa6.34□□□□□ -1.39
CPS1-207ENST00000479988 PBKQ96KB5 322 aa6.34□□□□□ -1.39
CPS1-207ENST00000479988 INPP4AQ96PE3 977 aaPredicted RBP6.34□□□□□ -1.39
CPS1-207ENST00000479988 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.34□□□□□ -1.39
CPS1-207ENST00000479988 BLOC1S4Q9NUP1 217 aa6.34□□□□□ -1.39
CPS1-207ENST00000479988 CLDND1Q9NY35 253 aa6.34□□□□□ -1.39
CPS1-207ENST00000479988 UMODL1Q5DID0 1318 aa6.34□□□□□ -1.39
CPS1-207ENST00000479988 TARSL2A2RTX5 802 aaKnown RBP6.34□□□□□ -1.4
CPS1-207ENST00000479988 CASTOR2A6NHX0 329 aa6.34□□□□□ -1.4
CPS1-207ENST00000479988 ZNF197O14709 1029 aa6.34□□□□□ -1.4
CPS1-207ENST00000479988 NR3C1P04150 777 aa6.34□□□□□ -1.4
CPS1-207ENST00000479988 PRLRP16471 622 aa6.34□□□□□ -1.4
CPS1-207ENST00000479988 ACOT2P49753 483 aa6.34□□□□□ -1.4
CPS1-207ENST00000479988 HLTFQ14527 1009 aaKnown RBP eCLIP6.34□□□□□ -1.4
CPS1-207ENST00000479988 MTF1Q14872 753 aa6.34□□□□□ -1.4
CPS1-207ENST00000479988 STILQ15468 1287 aa6.34□□□□□ -1.4
CPS1-207ENST00000479988 MEA1Q16626 185 aa6.34□□□□□ -1.4
CPS1-207ENST00000479988 ACCSLQ4AC99 568 aa6.34□□□□□ -1.4
CPS1-207ENST00000479988 ZNF394Q53GI3 561 aa6.34□□□□□ -1.4
CPS1-207ENST00000479988 LLGL2Q6P1M3 1020 aa6.34□□□□□ -1.4
CPS1-207ENST00000479988 DAAM2Q86T65 1068 aa6.34□□□□□ -1.4
CPS1-207ENST00000479988 DDX53Q86TM3 631 aaKnown RBP6.34□□□□□ -1.4
CPS1-207ENST00000479988 SLC51AQ86UW1 340 aa6.34□□□□□ -1.4
CPS1-207ENST00000479988 TIFAQ96CG3 184 aa6.34□□□□□ -1.4
CPS1-207ENST00000479988 PNMA5Q96PV4 448 aa6.34□□□□□ -1.4
CPS1-207ENST00000479988 DUSP9Q99956 384 aaKnown RBP6.34□□□□□ -1.4
CPS1-207ENST00000479988 TMEM117Q9H0C3 514 aa6.34□□□□□ -1.4
CPS1-207ENST00000479988 TRMT13Q9NUP7 481 aaKnown RBP6.34□□□□□ -1.4
CPS1-207ENST00000479988 TXNDC16Q9P2K2 825 aa6.34□□□□□ -1.4
CPS1-207ENST00000479988 ZNF831Q5JPB2 1677 aa6.34□□□□□ -1.4
CPS1-207ENST00000479988 NCK2O43639 380 aa6.33□□□□□ -1.4
CPS1-207ENST00000479988 PNMA6AP0CW24 399 aaPredicted RBP6.33□□□□□ -1.4
CPS1-207ENST00000479988 EN2P19622 333 aaPredicted RBP6.33□□□□□ -1.4
CPS1-207ENST00000479988 FECHP22830 423 aa6.33□□□□□ -1.4
CPS1-207ENST00000479988 ADORA2BP29275 332 aa6.33□□□□□ -1.4
CPS1-207ENST00000479988 ARL1P40616 181 aaPredicted RBP6.33□□□□□ -1.4
CPS1-207ENST00000479988 ARL4AP40617 200 aa6.33□□□□□ -1.4
CPS1-207ENST00000479988 EPHB1P54762 984 aa6.33□□□□□ -1.4
CPS1-207ENST00000479988 STARD3Q14849 445 aa6.33□□□□□ -1.4
CPS1-207ENST00000479988 USP41Q3LFD5 358 aa6.33□□□□□ -1.4
CPS1-207ENST00000479988 TSHZ1Q6ZSZ6 1077 aa6.33□□□□□ -1.4
CPS1-207ENST00000479988 ARHGAP18Q8N392 663 aa6.33□□□□□ -1.4
CPS1-207ENST00000479988 BADQ92934 168 aa6.33□□□□□ -1.4
CPS1-207ENST00000479988 MTMR8Q96EF0 704 aa6.33□□□□□ -1.4
CPS1-207ENST00000479988 CHP1Q99653 195 aa6.33□□□□□ -1.4
CPS1-207ENST00000479988 SOWAHBA6NEL2 793 aa6.33□□□□□ -1.4
CPS1-207ENST00000479988 F8W8V4 182 aa6.33□□□□□ -1.4
CPS1-207ENST00000479988 GOLGA8SH3BPF8 625 aa6.33□□□□□ -1.4
CPS1-207ENST00000479988 H2AFXP16104 143 aaPredicted RBP6.33□□□□□ -1.4
CPS1-207ENST00000479988 BCAR1P56945 870 aa6.33□□□□□ -1.4
CPS1-207ENST00000479988 FOXD4Q12950 439 aaPredicted RBP6.33□□□□□ -1.4
CPS1-207ENST00000479988 SEL1L2Q5TEA6 688 aa6.33□□□□□ -1.4
CPS1-207ENST00000479988 KRT39Q6A163 491 aa6.33□□□□□ -1.4
CPS1-207ENST00000479988 MTHFD1LQ6UB35 978 aa6.33□□□□□ -1.4
CPS1-207ENST00000479988 ARMCX6Q7L4S7 300 aa6.33□□□□□ -1.4
CPS1-207ENST00000479988 PEX26Q7Z412 305 aa6.33□□□□□ -1.4
CPS1-207ENST00000479988 FAM71BQ8TC56 605 aa6.33□□□□□ -1.4
CPS1-207ENST00000479988 ZNF507Q8TCN5 953 aa6.33□□□□□ -1.4
CPS1-207ENST00000479988 HAUS1Q96CS2 278 aa6.33□□□□□ -1.4
CPS1-207ENST00000479988 EEF2KMTQ96G04 330 aa6.33□□□□□ -1.4
CPS1-207ENST00000479988 TGS1Q96RS0 853 aaKnown RBP6.33□□□□□ -1.4
CPS1-207ENST00000479988 DNAJC18Q9H819 358 aa6.33□□□□□ -1.4
CPS1-207ENST00000479988 UXTQ9UBK9 157 aaPredicted RBP6.33□□□□□ -1.4
CPS1-207ENST00000479988 AMFRQ9UKV5 643 aa6.33□□□□□ -1.4
CPS1-207ENST00000479988 FNDC3AQ9Y2H6 1198 aaKnown RBP6.33□□□□□ -1.4
CPS1-207ENST00000479988 UBIAD1Q9Y5Z9 338 aa6.33□□□□□ -1.4
CPS1-207ENST00000479988 TTLL13PA6NNM8 815 aa6.33□□□□□ -1.4
CPS1-207ENST00000479988 PFDN6O15212 129 aa6.33□□□□□ -1.4
CPS1-207ENST00000479988 PAX3P23760 479 aa6.33□□□□□ -1.4
CPS1-207ENST00000479988 GJA9P57773 515 aa6.33□□□□□ -1.4
CPS1-207ENST00000479988 SHROOM1Q2M3G4 852 aaPredicted RBP6.33□□□□□ -1.4
CPS1-207ENST00000479988 SGO2Q562F6 1265 aa6.33□□□□□ -1.4
CPS1-207ENST00000479988 OVOS1Q6IE37 1185 aa6.33□□□□□ -1.4
CPS1-207ENST00000479988 UBL4BQ8N7F7 174 aa6.33□□□□□ -1.4
CPS1-207ENST00000479988 HASPINQ8TF76 798 aa6.33□□□□□ -1.4
CPS1-207ENST00000479988 SKA1Q96BD8 255 aa6.33□□□□□ -1.4
CPS1-207ENST00000479988 UROC1Q96N76 676 aa6.33□□□□□ -1.4
CPS1-207ENST00000479988 PURBQ96QR8 312 aaKnown RBP6.33□□□□□ -1.4
CPS1-207ENST00000479988 GAD1Q99259 594 aa6.33□□□□□ -1.4
CPS1-207ENST00000479988 TSPYL1Q9H0U9 437 aa6.33□□□□□ -1.4
CPS1-207ENST00000479988 PLCB1Q9NQ66 1216 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms