RNA–Protein interactions for RNA: ENST00000479591.1

TM9SF4-206, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2

Gene TM9SF4, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-206ENST00000479591 APOBEC3GQ9HC16 384 aaKnown RBP12.85□□□□□ -0.35
TM9SF4-206ENST00000479591 RGS18Q9NS28 235 aa12.85□□□□□ -0.35
TM9SF4-206ENST00000479591 SIX4Q9UIU6 781 aa12.85□□□□□ -0.35
TM9SF4-206ENST00000479591 PPP2R2CQ9Y2T4 447 aa12.85□□□□□ -0.35
TM9SF4-206ENST00000479591 NUB1Q9Y5A7 615 aa12.85□□□□□ -0.35
TM9SF4-206ENST00000479591 ADGRG1Q9Y653 693 aa12.85□□□□□ -0.35
TM9SF4-206ENST00000479591 TRIP11Q15643 1979 aa12.85□□□□□ -0.35
TM9SF4-206ENST00000479591 SMIM28A0A1B0GU29 152 aa12.84□□□□□ -0.35
TM9SF4-206ENST00000479591 AKR1B10O60218 316 aa12.84□□□□□ -0.35
TM9SF4-206ENST00000479591 MGEA5O60502 916 aa12.84□□□□□ -0.35
TM9SF4-206ENST00000479591 OFD1O75665 1012 aa12.84□□□□□ -0.35
TM9SF4-206ENST00000479591 CAPN15O75808 1086 aa12.84□□□□□ -0.35
TM9SF4-206ENST00000479591 LCA5LO95447 670 aa12.84□□□□□ -0.35
TM9SF4-206ENST00000479591 POLR2BP30876 1174 aaKnown RBP12.84□□□□□ -0.35
TM9SF4-206ENST00000479591 KIF11P52732 1056 aa12.84□□□□□ -0.35
TM9SF4-206ENST00000479591 YWHAEP62258 255 aaKnown RBP12.84□□□□□ -0.35
TM9SF4-206ENST00000479591 TLE2Q04725 743 aa12.84□□□□□ -0.35
TM9SF4-206ENST00000479591 FAAP100Q0VG06 881 aa12.84□□□□□ -0.35
TM9SF4-206ENST00000479591 SPA17Q15506 151 aa12.84□□□□□ -0.35
TM9SF4-206ENST00000479591 ASTE1Q2TB18 679 aaPredicted RBP12.84□□□□□ -0.35
TM9SF4-206ENST00000479591 PLEKHG4Q58EX7 1191 aa12.84□□□□□ -0.35
TM9SF4-206ENST00000479591 ZNF667Q5HYK9 610 aa12.84□□□□□ -0.35
TM9SF4-206ENST00000479591 SPOPLQ6IQ16 392 aa12.84□□□□□ -0.35
TM9SF4-206ENST00000479591 NECAB2Q7Z6G3 386 aa12.84□□□□□ -0.35
TM9SF4-206ENST00000479591 TXLNBQ8N3L3 684 aa12.84□□□□□ -0.35
TM9SF4-206ENST00000479591 LRRC52Q8N7C0 313 aa12.84□□□□□ -0.35
TM9SF4-206ENST00000479591 CXorf38Q8TB03 319 aa12.84□□□□□ -0.35
TM9SF4-206ENST00000479591 DIS3LQ8TF46 1054 aaKnown RBP12.84□□□□□ -0.35
TM9SF4-206ENST00000479591 KAT5Q92993 513 aa12.84□□□□□ -0.35
TM9SF4-206ENST00000479591 RPS6KC1Q96S38 1066 aa12.84□□□□□ -0.35
TM9SF4-206ENST00000479591 HIPK3Q9H422 1215 aa12.84□□□□□ -0.35
TM9SF4-206ENST00000479591 FAM124BQ9H5Z6 455 aaPredicted RBP12.84□□□□□ -0.35
TM9SF4-206ENST00000479591 LUC7LQ9NQ29 371 aaKnown RBP12.84□□□□□ -0.35
TM9SF4-206ENST00000479591 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.84□□□□□ -0.35
TM9SF4-206ENST00000479591 SPTLC3Q9NUV7 552 aa12.84□□□□□ -0.35
TM9SF4-206ENST00000479591 SLC38A7Q9NVC3 462 aa12.84□□□□□ -0.35
TM9SF4-206ENST00000479591 DNAH12Q6ZR08 3092 aa12.84□□□□□ -0.35
TM9SF4-206ENST00000479591 EOMESO95936 686 aa12.83□□□□□ -0.36
TM9SF4-206ENST00000479591 PLEKP08567 350 aaPredicted RBP12.83□□□□□ -0.36
TM9SF4-206ENST00000479591 ATF7P17544 494 aaPredicted RBP12.83□□□□□ -0.36
TM9SF4-206ENST00000479591 USP8P40818 1118 aa12.83□□□□□ -0.36
TM9SF4-206ENST00000479591 BPIFB4P59827 614 aa12.83□□□□□ -0.36
TM9SF4-206ENST00000479591 PTK2Q05397 1052 aa12.83□□□□□ -0.36
TM9SF4-206ENST00000479591 MYO1EQ12965 1108 aa12.83□□□□□ -0.36
TM9SF4-206ENST00000479591 BMS1Q14692 1282 aaKnown RBP12.83□□□□□ -0.36
TM9SF4-206ENST00000479591 GLRA4Q5JXX5 417 aa12.83□□□□□ -0.36
TM9SF4-206ENST00000479591 SLC24A5Q71RS6 500 aa12.83□□□□□ -0.36
TM9SF4-206ENST00000479591 TTC39CQ8N584 583 aa12.83□□□□□ -0.36
TM9SF4-206ENST00000479591 SEPT8Q92599 483 aa12.83□□□□□ -0.36
TM9SF4-206ENST00000479591 HPDLQ96IR7 371 aa12.83□□□□□ -0.36
TM9SF4-206ENST00000479591 PAWRQ96IZ0 340 aaKnown RBP12.83□□□□□ -0.36
TM9SF4-206ENST00000479591 DESI2Q9BSY9 194 aa12.83□□□□□ -0.36
TM9SF4-206ENST00000479591 TSPYL2Q9H2G4 693 aaPredicted RBP12.83□□□□□ -0.36
TM9SF4-206ENST00000479591 KLK14Q9P0G3 267 aa12.83□□□□□ -0.36
TM9SF4-206ENST00000479591 AGAP1Q9UPQ3 857 aa12.83□□□□□ -0.36
TM9SF4-206ENST00000479591 ANO9A1A5B4 782 aa12.82□□□□□ -0.36
TM9SF4-206ENST00000479591 C9IYK1 514 aa12.82□□□□□ -0.36
TM9SF4-206ENST00000479591 RBAK-RBAKDNI3L0D1 243 aa12.82□□□□□ -0.36
TM9SF4-206ENST00000479591 PTGESO14684 152 aa12.82□□□□□ -0.36
TM9SF4-206ENST00000479591 NBNO60934 754 aa12.82□□□□□ -0.36
TM9SF4-206ENST00000479591 CXCL10P02778 98 aa12.82□□□□□ -0.36
TM9SF4-206ENST00000479591 PNMA6AP0CW24 399 aaPredicted RBP12.82□□□□□ -0.36
TM9SF4-206ENST00000479591 KRT5P13647 590 aa12.82□□□□□ -0.36
TM9SF4-206ENST00000479591 ACO1P21399 889 aaKnown RBP12.82□□□□□ -0.36
TM9SF4-206ENST00000479591 PNPLA4P41247 253 aa12.82□□□□□ -0.36
TM9SF4-206ENST00000479591 FAM189BP81408 668 aa12.82□□□□□ -0.36
TM9SF4-206ENST00000479591 SLC18A3Q16572 532 aa12.82□□□□□ -0.36
TM9SF4-206ENST00000479591 C10orf76Q5T2E6 689 aa12.82□□□□□ -0.36
TM9SF4-206ENST00000479591 AGMOQ6ZNB7 445 aa12.82□□□□□ -0.36
TM9SF4-206ENST00000479591 ZNF571Q7Z3V5 609 aaPredicted RBP12.82□□□□□ -0.36
TM9SF4-206ENST00000479591 ZNF598Q86UK7 904 aaKnown RBP12.82□□□□□ -0.36
TM9SF4-206ENST00000479591 ECHDC2Q86YB7 292 aa12.82□□□□□ -0.36
TM9SF4-206ENST00000479591 C17orf53Q8N3J3 647 aaPredicted RBP12.82□□□□□ -0.36
TM9SF4-206ENST00000479591 ACRBPQ8NEB7 543 aa12.82□□□□□ -0.36
TM9SF4-206ENST00000479591 PPP1R13BQ96KQ4 1090 aa12.82□□□□□ -0.36
TM9SF4-206ENST00000479591 ZNF560Q96MR9 790 aa12.82□□□□□ -0.36
TM9SF4-206ENST00000479591 PPP1R10Q96QC0 940 aaKnown RBP12.82□□□□□ -0.36
TM9SF4-206ENST00000479591 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.82□□□□□ -0.36
TM9SF4-206ENST00000479591 CXCL16Q9H2A7 254 aa12.82□□□□□ -0.36
TM9SF4-206ENST00000479591 RSAD1Q9HA92 442 aa12.82□□□□□ -0.36
TM9SF4-206ENST00000479591 CYP3A43Q9HB55 503 aa12.82□□□□□ -0.36
TM9SF4-206ENST00000479591 RNF216Q9NWF9 866 aaPredicted RBP12.82□□□□□ -0.36
TM9SF4-206ENST00000479591 TRMT1Q9NXH9 659 aaKnown RBP12.82□□□□□ -0.36
TM9SF4-206ENST00000479591 TUBGCP4Q9UGJ1 667 aa12.82□□□□□ -0.36
TM9SF4-206ENST00000479591 TBX21Q9UL17 535 aa12.82□□□□□ -0.36
TM9SF4-206ENST00000479591 CNTN6Q9UQ52 1028 aa12.82□□□□□ -0.36
TM9SF4-206ENST00000479591 ATP11BQ9Y2G3 1177 aa12.82□□□□□ -0.36
TM9SF4-206ENST00000479591 ARL5CA6NH57 179 aa12.81□□□□□ -0.36
TM9SF4-206ENST00000479591 USP27XA6NNY8 438 aa12.81□□□□□ -0.36
TM9SF4-206ENST00000479591 PIRO00625 290 aa12.81□□□□□ -0.36
TM9SF4-206ENST00000479591 INPPL1O15357 1258 aa12.81□□□□□ -0.36
TM9SF4-206ENST00000479591 CYP26A1O43174 497 aa12.81□□□□□ -0.36
TM9SF4-206ENST00000479591 THP07101 528 aa12.81□□□□□ -0.36
TM9SF4-206ENST00000479591 CLTBP09497 229 aa12.81□□□□□ -0.36
TM9SF4-206ENST00000479591 LRPAP1P30533 357 aa12.81□□□□□ -0.36
TM9SF4-206ENST00000479591 RFC2P35250 354 aa12.81□□□□□ -0.36
TM9SF4-206ENST00000479591 CLCN1P35523 988 aa12.81□□□□□ -0.36
TM9SF4-206ENST00000479591 MLH1P40692 756 aa12.81□□□□□ -0.36
TM9SF4-206ENST00000479591 ASPAP45381 313 aa12.81□□□□□ -0.36
TM9SF4-206ENST00000479591 PDE6CP51160 858 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms