RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 ASPHQ12797 758 aa15.13■□□□□ 0.01
COL20A1-206ENST00000479501 PGM5Q15124 567 aa15.13■□□□□ 0.01
COL20A1-206ENST00000479501 HBP1O60381 514 aa15.13■□□□□ 0.01
COL20A1-206ENST00000479501 TRPA1O75762 1119 aa15.13■□□□□ 0.01
COL20A1-206ENST00000479501 AGTP01019 485 aa15.13■□□□□ 0.01
COL20A1-206ENST00000479501 CASP5P51878 434 aa15.13■□□□□ 0.01
COL20A1-206ENST00000479501 TGFB2P61812 414 aa15.13■□□□□ 0.01
COL20A1-206ENST00000479501 RBP5P82980 135 aa15.13■□□□□ 0.01
COL20A1-206ENST00000479501 KCNA1Q09470 495 aa15.13■□□□□ 0.01
COL20A1-206ENST00000479501 PIGHQ14442 188 aaPredicted RBP15.13■□□□□ 0.01
COL20A1-206ENST00000479501 STAT4Q14765 748 aa15.13■□□□□ 0.01
COL20A1-206ENST00000479501 IRF2BP1Q8IU81 584 aa15.13■□□□□ 0.01
COL20A1-206ENST00000479501 ATP11CQ8NB49 1132 aa15.13■□□□□ 0.01
COL20A1-206ENST00000479501 ACTRT1Q8TDG2 376 aa15.13■□□□□ 0.01
COL20A1-206ENST00000479501 CCT8L2Q96SF2 557 aa15.13■□□□□ 0.01
COL20A1-206ENST00000479501 ETNK1Q9HBU6 452 aa15.13■□□□□ 0.01
COL20A1-206ENST00000479501 GTF2H1P32780 548 aa15.13■□□□□ 0.01
COL20A1-206ENST00000479501 ESRRGP62508 458 aa15.13■□□□□ 0.01
COL20A1-206ENST00000479501 SV2AQ7L0J3 742 aa15.13■□□□□ 0.01
COL20A1-206ENST00000479501 C9orf72Q96LT7 481 aa15.13■□□□□ 0.01
COL20A1-206ENST00000479501 CYTH2Q99418 400 aa15.13■□□□□ 0.01
COL20A1-206ENST00000479501 NID2Q14112 1375 aa15.13■□□□□ 0.01
COL20A1-206ENST00000479501 CUL2Q13617 745 aa15.13■□□□□ 0.01
COL20A1-206ENST00000479501 SEZ6Q53EL9 994 aa15.13■□□□□ 0.01
COL20A1-206ENST00000479501 GPAT2Q6NUI2 795 aa15.13■□□□□ 0.01
COL20A1-206ENST00000479501 EFCAB12Q6NXP0 572 aa15.13■□□□□ 0.01
COL20A1-206ENST00000479501 NIPA1Q7RTP0 329 aa15.13■□□□□ 0.01
COL20A1-206ENST00000479501 ANKRD13AQ8IZ07 590 aa15.13■□□□□ 0.01
COL20A1-206ENST00000479501 TTC17Q96AE7 1141 aa15.13■□□□□ 0.01
COL20A1-206ENST00000479501 RBM15Q96T37 977 aaKnown RBP eCLIP15.13■□□□□ 0.01
COL20A1-206ENST00000479501 EPN3Q9H201 632 aa15.13■□□□□ 0.01
COL20A1-206ENST00000479501 SNX9Q9Y5X1 595 aa15.13■□□□□ 0.01
COL20A1-206ENST00000479501 EIF4E1BA6NMX2 242 aaKnown RBP15.12■□□□□ 0.01
COL20A1-206ENST00000479501 GYG2O15488 501 aa15.12■□□□□ 0.01
COL20A1-206ENST00000479501 PJA2O43164 708 aa15.12■□□□□ 0.01
COL20A1-206ENST00000479501 ATP5HO75947 161 aa15.12■□□□□ 0.01
COL20A1-206ENST00000479501 KRT38O76015 456 aa15.12■□□□□ 0.01
COL20A1-206ENST00000479501 MAPTP10636 758 aaKnown RBP15.12■□□□□ 0.01
COL20A1-206ENST00000479501 MAPK7Q13164 816 aa15.12■□□□□ 0.01
COL20A1-206ENST00000479501 ST13P4Q8IZP2 240 aaPredicted RBP15.12■□□□□ 0.01
COL20A1-206ENST00000479501 SLC20A1Q8WUM9 679 aa15.12■□□□□ 0.01
COL20A1-206ENST00000479501 DEPDC1BQ8WUY9 529 aa15.12■□□□□ 0.01
COL20A1-206ENST00000479501 PRMT7Q9NVM4 692 aaPredicted RBP15.12■□□□□ 0.01
COL20A1-206ENST00000479501 ERAP1Q9NZ08 941 aa15.12■□□□□ 0.01
COL20A1-206ENST00000479501 ABCC6O95255 1503 aa15.12■□□□□ 0.01
COL20A1-206ENST00000479501 ROBO3Q96MS0 1386 aa15.12■□□□□ 0.01
COL20A1-206ENST00000479501 CFAP73A6NFT4 308 aa15.12■□□□□ 0.01
COL20A1-206ENST00000479501 COPEO14579 308 aa15.12■□□□□ 0.01
COL20A1-206ENST00000479501 PDGFRAP16234 1089 aa15.12■□□□□ 0.01
COL20A1-206ENST00000479501 PBX1P40424 430 aa15.12■□□□□ 0.01
COL20A1-206ENST00000479501 NAMPTP43490 491 aa15.12■□□□□ 0.01
COL20A1-206ENST00000479501 ROR1Q01973 937 aa15.12■□□□□ 0.01
COL20A1-206ENST00000479501 CDR2LQ86X02 465 aaPredicted RBP15.12■□□□□ 0.01
COL20A1-206ENST00000479501 PPWD1Q96BP3 646 aaKnown RBP15.12■□□□□ 0.01
COL20A1-206ENST00000479501 DHX35Q9H5Z1 703 aaKnown RBP15.12■□□□□ 0.01
COL20A1-206ENST00000479501 SPON1Q9HCB6 807 aa15.12■□□□□ 0.01
COL20A1-206ENST00000479501 SMYD2Q9NRG4 433 aa15.12■□□□□ 0.01
COL20A1-206ENST00000479501 STAP1Q9ULZ2 295 aa15.12■□□□□ 0.01
COL20A1-206ENST00000479501 TTC36A6NLP5 189 aa15.12■□□□□ 0.01
COL20A1-206ENST00000479501 EPHB6O15197 1021 aa15.12■□□□□ 0.01
COL20A1-206ENST00000479501 GH1P01241 217 aa15.12■□□□□ 0.01
COL20A1-206ENST00000479501 LMNAP02545 664 aaKnown RBP15.12■□□□□ 0.01
COL20A1-206ENST00000479501 ADORA2BP29275 332 aa15.12■□□□□ 0.01
COL20A1-206ENST00000479501 HSD17B3P37058 310 aa15.12■□□□□ 0.01
COL20A1-206ENST00000479501 COILP38432 576 aaPredicted RBP15.12■□□□□ 0.01
COL20A1-206ENST00000479501 CORO7P57737 925 aa15.12■□□□□ 0.01
COL20A1-206ENST00000479501 TMEM132DQ14C87 1099 aa15.12■□□□□ 0.01
COL20A1-206ENST00000479501 HIF1AQ16665 826 aa15.12■□□□□ 0.01
COL20A1-206ENST00000479501 C1orf186Q6ZWK4 172 aa15.12■□□□□ 0.01
COL20A1-206ENST00000479501 FEZF2Q8TBJ5 459 aa15.12■□□□□ 0.01
COL20A1-206ENST00000479501 RANBP17Q9H2T7 1088 aaKnown RBP15.12■□□□□ 0.01
COL20A1-206ENST00000479501 ZC3H11AO75152 810 aaKnown RBP eCLIP15.11■□□□□ 0.01
COL20A1-206ENST00000479501 CDH16O75309 829 aa15.11■□□□□ 0.01
COL20A1-206ENST00000479501 TOM1L1O75674 476 aa15.11■□□□□ 0.01
COL20A1-206ENST00000479501 ELF1P32519 619 aa15.11■□□□□ 0.01
COL20A1-206ENST00000479501 EIF3EP60228 445 aaKnown RBP15.11■□□□□ 0.01
COL20A1-206ENST00000479501 P3H1Q32P28 736 aa15.11■□□□□ 0.01
COL20A1-206ENST00000479501 AGBL2Q5U5Z8 902 aa15.11■□□□□ 0.01
COL20A1-206ENST00000479501 PPM1NQ8N819 430 aa15.11■□□□□ 0.01
COL20A1-206ENST00000479501 RNF139Q8WU17 664 aa15.11■□□□□ 0.01
COL20A1-206ENST00000479501 AKT1S1Q96B36 256 aa15.11■□□□□ 0.01
COL20A1-206ENST00000479501 CENPKQ9BS16 269 aa15.11■□□□□ 0.01
COL20A1-206ENST00000479501 TLK1Q9UKI8 766 aa15.11■□□□□ 0.01
COL20A1-206ENST00000479501 VWA5AO00534 786 aa15.11■□□□□ 0.01
COL20A1-206ENST00000479501 GPC4O75487 556 aa15.11■□□□□ 0.01
COL20A1-206ENST00000479501 NPM3O75607 178 aaKnown RBP15.11■□□□□ 0.01
COL20A1-206ENST00000479501 GLI1P08151 1106 aa15.11■□□□□ 0.01
COL20A1-206ENST00000479501 SNHG28P0DPA3 235 aa15.11■□□□□ 0.01
COL20A1-206ENST00000479501 LSP1P33241 339 aa15.11■□□□□ 0.01
COL20A1-206ENST00000479501 TMED1Q13445 227 aa15.11■□□□□ 0.01
COL20A1-206ENST00000479501 SNAPC2Q13487 334 aa15.11■□□□□ 0.01
COL20A1-206ENST00000479501 GRAMD1BQ3KR37 738 aa15.11■□□□□ 0.01
COL20A1-206ENST00000479501 MMEL1Q495T6 779 aa15.11■□□□□ 0.01
COL20A1-206ENST00000479501 PIP4K2CQ8TBX8 421 aa15.11■□□□□ 0.01
COL20A1-206ENST00000479501 BTBD6Q96KE9 485 aa15.11■□□□□ 0.01
COL20A1-206ENST00000479501 FAM118BQ9BPY3 351 aa15.11■□□□□ 0.01
COL20A1-206ENST00000479501 SUFUQ9UMX1 484 aa15.11■□□□□ 0.01
COL20A1-206ENST00000479501 AFG3L2Q9Y4W6 797 aa15.11■□□□□ 0.01
COL20A1-206ENST00000479501 KCPQ6ZWJ8 1503 aa15.11■□□□□ 0.01
COL20A1-206ENST00000479501 A0A0G2JND7 137 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms