RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 MCTP1Q6DN14 999 aa7.31□□□□□ -1.24
VCP-205ENST00000479300 MAEAQ7L5Y9 396 aa7.31□□□□□ -1.24
VCP-205ENST00000479300 NOSTRINQ8IVI9 506 aa7.31□□□□□ -1.24
VCP-205ENST00000479300 GPR161Q8N6U8 529 aaKnown RBP7.31□□□□□ -1.24
VCP-205ENST00000479300 DEPTORQ8TB45 409 aa7.31□□□□□ -1.24
VCP-205ENST00000479300 PIGOQ8TEQ8 1089 aa7.31□□□□□ -1.24
VCP-205ENST00000479300 TCEAL4Q96EI5 215 aa7.31□□□□□ -1.24
VCP-205ENST00000479300 MCRS1Q96EZ8 462 aa7.31□□□□□ -1.24
VCP-205ENST00000479300 IFT74Q96LB3 600 aa7.31□□□□□ -1.24
VCP-205ENST00000479300 HSD17B14Q9BPX1 270 aa7.31□□□□□ -1.24
VCP-205ENST00000479300 ADPGKQ9BRR6 497 aa7.31□□□□□ -1.24
VCP-205ENST00000479300 TTPALQ9BTX7 342 aa7.31□□□□□ -1.24
VCP-205ENST00000479300 POLR3CQ9BUI4 534 aaPredicted RBP7.31□□□□□ -1.24
VCP-205ENST00000479300 POLR3FQ9H1D9 316 aaPredicted RBP7.31□□□□□ -1.24
VCP-205ENST00000479300 CHRDQ9H2X0 955 aa7.31□□□□□ -1.24
VCP-205ENST00000479300 C2orf42Q9NWW7 574 aa7.31□□□□□ -1.24
VCP-205ENST00000479300 LRWD1Q9UFC0 647 aa7.31□□□□□ -1.24
VCP-205ENST00000479300 POLIQ9UNA4 740 aa7.31□□□□□ -1.24
VCP-205ENST00000479300 USP20Q9Y2K6 914 aa7.31□□□□□ -1.24
VCP-205ENST00000479300 FAM208BQ5VWN6 2430 aa7.31□□□□□ -1.24
VCP-205ENST00000479300 IGF2RP11717 2491 aa7.3□□□□□ -1.24
VCP-205ENST00000479300 SF3B1O75533 1304 aaKnown RBP eCLIP7.3□□□□□ -1.24
VCP-205ENST00000479300 AKAP13Q12802 2813 aa7.3□□□□□ -1.24
VCP-205ENST00000479300 A0A087WWV3 80 aa7.3□□□□□ -1.24
VCP-205ENST00000479300 A0A1B0GUA9 196 aa7.3□□□□□ -1.24
VCP-205ENST00000479300 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.3□□□□□ -1.24
VCP-205ENST00000479300 HRO43593 1189 aa7.3□□□□□ -1.24
VCP-205ENST00000479300 TADA2AO75478 443 aa7.3□□□□□ -1.24
VCP-205ENST00000479300 ECI2O75521 394 aa7.3□□□□□ -1.24
VCP-205ENST00000479300 LIG1P18858 919 aa7.3□□□□□ -1.24
VCP-205ENST00000479300 SDHBP21912 280 aa7.3□□□□□ -1.24
VCP-205ENST00000479300 MUTP22033 750 aa7.3□□□□□ -1.24
VCP-205ENST00000479300 OR1D2P34982 312 aa7.3□□□□□ -1.24
VCP-205ENST00000479300 ARL2P36404 184 aa7.3□□□□□ -1.24
VCP-205ENST00000479300 CCR2P41597 374 aa7.3□□□□□ -1.24
VCP-205ENST00000479300 MAGEA9P43362 315 aa7.3□□□□□ -1.24
VCP-205ENST00000479300 MCM2P49736 904 aa7.3□□□□□ -1.24
VCP-205ENST00000479300 RARRES1P49788 294 aa7.3□□□□□ -1.24
VCP-205ENST00000479300 PFKPQ01813 784 aa7.3□□□□□ -1.24
VCP-205ENST00000479300 SATB1Q01826 763 aa7.3□□□□□ -1.24
VCP-205ENST00000479300 CREMQ03060 361 aa7.3□□□□□ -1.24
VCP-205ENST00000479300 ADCY1Q08828 1119 aa7.3□□□□□ -1.24
VCP-205ENST00000479300 TUSC3Q13454 348 aa7.3□□□□□ -1.24
VCP-205ENST00000479300 RAB33AQ14088 237 aa7.3□□□□□ -1.24
VCP-205ENST00000479300 GRM2Q14416 872 aa7.3□□□□□ -1.24
VCP-205ENST00000479300 PABPC1LQ4VXU2 614 aaKnown RBP7.3□□□□□ -1.24
VCP-205ENST00000479300 PRSS36Q5K4E3 855 aa7.3□□□□□ -1.24
VCP-205ENST00000479300 AXDND1Q5T1B0 1012 aaPredicted RBP7.3□□□□□ -1.24
VCP-205ENST00000479300 LIN9Q5TKA1 542 aa7.3□□□□□ -1.24
VCP-205ENST00000479300 KRT79Q5XKE5 535 aa7.3□□□□□ -1.24
VCP-205ENST00000479300 SLC27A1Q6PCB7 646 aa7.3□□□□□ -1.24
VCP-205ENST00000479300 ZNF852Q6ZMS4 543 aa7.3□□□□□ -1.24
VCP-205ENST00000479300 CEP57Q86XR8 500 aa7.3□□□□□ -1.24
VCP-205ENST00000479300 MYRIPQ8NFW9 859 aa7.3□□□□□ -1.24
VCP-205ENST00000479300 FBXO18Q8NFZ0 1043 aa7.3□□□□□ -1.24
VCP-205ENST00000479300 BORCS6Q96GS4 357 aa7.3□□□□□ -1.24
VCP-205ENST00000479300 PRIMPOLQ96LW4 560 aa7.3□□□□□ -1.24
VCP-205ENST00000479300 MTMR9Q96QG7 549 aa7.3□□□□□ -1.24
VCP-205ENST00000479300 PRMT7Q9NVM4 692 aaPredicted RBP7.3□□□□□ -1.24
VCP-205ENST00000479300 CCDC39Q9UFE4 941 aa7.3□□□□□ -1.24
VCP-205ENST00000479300 PARP2Q9UGN5 583 aa7.3□□□□□ -1.24
VCP-205ENST00000479300 KCNH3Q9ULD8 1083 aa7.3□□□□□ -1.24
VCP-205ENST00000479300 NDRG2Q9UN36 371 aaKnown RBP7.3□□□□□ -1.24
VCP-205ENST00000479300 TICRRQ7Z2Z1 1910 aa7.3□□□□□ -1.24
VCP-205ENST00000479300 ZMYM2Q9UBW7 1377 aa7.3□□□□□ -1.24
VCP-205ENST00000479300 LAMA1P25391 3075 aa7.29□□□□□ -1.24
VCP-205ENST00000479300 I3L4J1 428 aa7.29□□□□□ -1.24
VCP-205ENST00000479300 LAD1O00515 517 aa7.29□□□□□ -1.24
VCP-205ENST00000479300 WNT7AO00755 349 aa7.29□□□□□ -1.24
VCP-205ENST00000479300 TM4SF5O14894 197 aa7.29□□□□□ -1.24
VCP-205ENST00000479300 N4BP3O15049 544 aa7.29□□□□□ -1.24
VCP-205ENST00000479300 XYLBO75191 536 aa7.29□□□□□ -1.24
VCP-205ENST00000479300 MOSPD3O75425 235 aa7.29□□□□□ -1.24
VCP-205ENST00000479300 RHOP08100 348 aa7.29□□□□□ -1.24
VCP-205ENST00000479300 HOXB3P14651 431 aaPredicted RBP7.29□□□□□ -1.24
VCP-205ENST00000479300 FGFR3P22607 806 aa7.29□□□□□ -1.24
VCP-205ENST00000479300 RPA1P27694 616 aa7.29□□□□□ -1.24
VCP-205ENST00000479300 PMLP29590 882 aa7.29□□□□□ -1.24
VCP-205ENST00000479300 PRPF4BQ13523 1007 aaKnown RBP7.29□□□□□ -1.24
VCP-205ENST00000479300 PDIA5Q14554 519 aa7.29□□□□□ -1.24
VCP-205ENST00000479300 MAPK6Q16659 721 aa7.29□□□□□ -1.24
VCP-205ENST00000479300 FAM78AQ5JUQ0 283 aa7.29□□□□□ -1.24
VCP-205ENST00000479300 LAIR1Q6GTX8 287 aa7.29□□□□□ -1.24
VCP-205ENST00000479300 PADI6Q6TGC4 694 aa7.29□□□□□ -1.24
VCP-205ENST00000479300 DTHD1Q6ZMT9 781 aa7.29□□□□□ -1.24
VCP-205ENST00000479300 MAMSTRQ6ZN01 415 aa7.29□□□□□ -1.24
VCP-205ENST00000479300 PRR23CQ6ZRP0 262 aa7.29□□□□□ -1.24
VCP-205ENST00000479300 CATSPER3Q86XQ3 398 aa7.29□□□□□ -1.24
VCP-205ENST00000479300 GPIHBP1Q8IV16 184 aa7.29□□□□□ -1.24
VCP-205ENST00000479300 MAP4K3Q8IVH8 894 aa7.29□□□□□ -1.24
VCP-205ENST00000479300 PLPP6Q8IY26 295 aa7.29□□□□□ -1.24
VCP-205ENST00000479300 C3orf58Q8NDZ4 430 aa7.29□□□□□ -1.24
VCP-205ENST00000479300 NETO1Q8TDF5 533 aa7.29□□□□□ -1.24
VCP-205ENST00000479300 SNX29Q8TEQ0 813 aa7.29□□□□□ -1.24
VCP-205ENST00000479300 KIFAP3Q92845 792 aa7.29□□□□□ -1.24
VCP-205ENST00000479300 RSPRY1Q96DX4 576 aa7.29□□□□□ -1.24
VCP-205ENST00000479300 CDK5RAP3Q96JB5 506 aa7.29□□□□□ -1.24
VCP-205ENST00000479300 ZSWIM3Q96MP5 696 aa7.29□□□□□ -1.24
VCP-205ENST00000479300 NELL2Q99435 816 aa7.29□□□□□ -1.24
VCP-205ENST00000479300 NFKBIZQ9BYH8 718 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms