RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 MYL4P12829 197 aa18.86■□□□□ 0.61
VIM-204ENST00000478746 GJA1P17302 382 aa18.86■□□□□ 0.61
VIM-204ENST00000478746 CYP11B2P19099 503 aa18.86■□□□□ 0.61
VIM-204ENST00000478746 EFNA5P52803 228 aa18.86■□□□□ 0.61
VIM-204ENST00000478746 YARSP54577 528 aaKnown RBP18.86■□□□□ 0.61
VIM-204ENST00000478746 SOX4Q06945 474 aaPredicted RBP18.86■□□□□ 0.61
VIM-204ENST00000478746 MRPL58Q14197 206 aaKnown RBP18.86■□□□□ 0.61
VIM-204ENST00000478746 PPP2R5AQ15172 486 aa18.86■□□□□ 0.61
VIM-204ENST00000478746 NT5DC1Q5TFE4 455 aa18.86■□□□□ 0.61
VIM-204ENST00000478746 ATF7IP2Q5U623 682 aa18.86■□□□□ 0.61
VIM-204ENST00000478746 C1orf228Q6PIY5 440 aa18.86■□□□□ 0.61
VIM-204ENST00000478746 PADI6Q6TGC4 694 aa18.86■□□□□ 0.61
VIM-204ENST00000478746 YAF2Q8IY57 180 aa18.86■□□□□ 0.61
VIM-204ENST00000478746 FAM160A2Q8N612 972 aaPredicted RBP18.86■□□□□ 0.61
VIM-204ENST00000478746 WASF1Q92558 559 aa18.86■□□□□ 0.61
VIM-204ENST00000478746 TNFRSF25Q93038 417 aa18.86■□□□□ 0.61
VIM-204ENST00000478746 E2F7Q96AV8 911 aa18.86■□□□□ 0.61
VIM-204ENST00000478746 MSANTD3Q96H12 275 aa18.86■□□□□ 0.61
VIM-204ENST00000478746 CEP72Q9P209 647 aa18.86■□□□□ 0.61
VIM-204ENST00000478746 ORC3Q9UBD5 711 aaPredicted RBP18.86■□□□□ 0.61
VIM-204ENST00000478746 FBXL5Q9UKA1 691 aa18.86■□□□□ 0.61
VIM-204ENST00000478746 K7ESF4 209 aa18.85■□□□□ 0.61
VIM-204ENST00000478746 PODXLO00592 558 aa18.85■□□□□ 0.61
VIM-204ENST00000478746 PAPSS2O95340 614 aaPredicted RBP18.85■□□□□ 0.61
VIM-204ENST00000478746 KPNA1P52294 538 aaPredicted RBP18.85■□□□□ 0.61
VIM-204ENST00000478746 TWF1Q12792 350 aa18.85■□□□□ 0.61
VIM-204ENST00000478746 AASDHQ4L235 1098 aaPredicted RBP18.85■□□□□ 0.61
VIM-204ENST00000478746 CTXN3Q4LDR2 81 aa18.85■□□□□ 0.61
VIM-204ENST00000478746 N4BP2L1Q5TBK1 243 aaPredicted RBP18.85■□□□□ 0.61
VIM-204ENST00000478746 LEMD2Q8NC56 503 aa18.85■□□□□ 0.61
VIM-204ENST00000478746 IFT74Q96LB3 600 aa18.85■□□□□ 0.61
VIM-204ENST00000478746 GPR88Q9GZN0 384 aa18.85■□□□□ 0.61
VIM-204ENST00000478746 SLITRK6Q9H5Y7 841 aa18.85■□□□□ 0.61
VIM-204ENST00000478746 C8orf33Q9H7E9 229 aaPredicted RBP18.85■□□□□ 0.61
VIM-204ENST00000478746 ASAH2Q9NR71 780 aa18.85■□□□□ 0.61
VIM-204ENST00000478746 TOPORSQ9NS56 1045 aaPredicted RBP18.85■□□□□ 0.61
VIM-204ENST00000478746 RBM12Q9NTZ6 932 aaKnown RBP18.85■□□□□ 0.61
VIM-204ENST00000478746 SLC38A7Q9NVC3 462 aa18.85■□□□□ 0.61
VIM-204ENST00000478746 NUB1Q9Y5A7 615 aa18.85■□□□□ 0.61
VIM-204ENST00000478746 SDK1Q7Z5N4 2213 aa18.85■□□□□ 0.61
VIM-204ENST00000478746 COL4A2P08572 1712 aa18.84■□□□□ 0.61
VIM-204ENST00000478746 ARHGEF35A5YM69 484 aa18.84■□□□□ 0.61
VIM-204ENST00000478746 ARNTLO00327 626 aa18.84■□□□□ 0.61
VIM-204ENST00000478746 MED24O75448 989 aa18.84■□□□□ 0.61
VIM-204ENST00000478746 TEAD2Q15562 447 aa18.84■□□□□ 0.61
VIM-204ENST00000478746 DGKKQ5KSL6 1271 aa18.84■□□□□ 0.61
VIM-204ENST00000478746 ALKAL1Q6UXT8 129 aa18.84■□□□□ 0.61
VIM-204ENST00000478746 KIFC3Q9BVG8 833 aa18.84■□□□□ 0.61
VIM-204ENST00000478746 CCDC94Q9BW85 323 aaPredicted RBP18.84■□□□□ 0.61
VIM-204ENST00000478746 POLD4Q9HCU8 107 aa18.84■□□□□ 0.61
VIM-204ENST00000478746 AFF4Q9UHB7 1163 aaKnown RBP18.84■□□□□ 0.61
VIM-204ENST00000478746 MAFFQ9ULX9 164 aa18.84■□□□□ 0.61
VIM-204ENST00000478746 SLC38A8A6NNN8 435 aa18.83■□□□□ 0.6
VIM-204ENST00000478746 K7ERI5 159 aa18.83■□□□□ 0.6
VIM-204ENST00000478746 AXIN1O15169 862 aa18.83■□□□□ 0.6
VIM-204ENST00000478746 CHADO15335 359 aa18.83■□□□□ 0.6
VIM-204ENST00000478746 PMLP29590 882 aa18.83■□□□□ 0.6
VIM-204ENST00000478746 GRM5P41594 1212 aa18.83■□□□□ 0.6
VIM-204ENST00000478746 LIMK1P53667 647 aa18.83■□□□□ 0.6
VIM-204ENST00000478746 EPHA5P54756 1037 aa18.83■□□□□ 0.6
VIM-204ENST00000478746 OSTNP61366 133 aa18.83■□□□□ 0.6
VIM-204ENST00000478746 XKR4Q5GH76 650 aa18.83■□□□□ 0.6
VIM-204ENST00000478746 POLR3CQ9BUI4 534 aaPredicted RBP18.83■□□□□ 0.6
VIM-204ENST00000478746 TNFSF13BQ9Y275 285 aa18.83■□□□□ 0.6
VIM-204ENST00000478746 NCANO14594 1321 aa18.82■□□□□ 0.6
VIM-204ENST00000478746 WNT7AO00755 349 aa18.82■□□□□ 0.6
VIM-204ENST00000478746 EPB41L2O43491 1005 aaKnown RBP18.82■□□□□ 0.6
VIM-204ENST00000478746 PFKFB2O60825 505 aa18.82■□□□□ 0.6
VIM-204ENST00000478746 HOXA6P31267 233 aa18.82■□□□□ 0.6
VIM-204ENST00000478746 RPL9P32969 192 aaKnown RBP18.82■□□□□ 0.6
VIM-204ENST00000478746 SOX9P48436 509 aa18.82■□□□□ 0.6
VIM-204ENST00000478746 SF3A2Q15428 464 aaKnown RBP18.82■□□□□ 0.6
VIM-204ENST00000478746 Q6ZS52 159 aa18.82■□□□□ 0.6
VIM-204ENST00000478746 WDR5BQ86VZ2 330 aa18.82■□□□□ 0.6
VIM-204ENST00000478746 CEP120Q8N960 986 aa18.82■□□□□ 0.6
VIM-204ENST00000478746 C12orf50Q8NA57 414 aaPredicted RBP18.82■□□□□ 0.6
VIM-204ENST00000478746 SHKBP1Q8TBC3 707 aa18.82■□□□□ 0.6
VIM-204ENST00000478746 FAM200AQ8TCP9 573 aa18.82■□□□□ 0.6
VIM-204ENST00000478746 ZMAT2Q96NC0 199 aaKnown RBP18.82■□□□□ 0.6
VIM-204ENST00000478746 ARRDC1-AS1Q9H2J1 176 aa18.82■□□□□ 0.6
VIM-204ENST00000478746 TMEM60Q9H2L4 133 aa18.82■□□□□ 0.6
VIM-204ENST00000478746 RALYQ9UKM9 306 aaKnown RBP18.82■□□□□ 0.6
VIM-204ENST00000478746 BTBD18B2RXH4 712 aa18.81■□□□□ 0.6
VIM-204ENST00000478746 TM4SF5O14894 197 aa18.81■□□□□ 0.6
VIM-204ENST00000478746 CTDNEP1O95476 244 aa18.81■□□□□ 0.6
VIM-204ENST00000478746 SHC2P98077 582 aa18.81■□□□□ 0.6
VIM-204ENST00000478746 ZNF280DQ6N043 979 aa18.81■□□□□ 0.6
VIM-204ENST00000478746 RNF19BQ6ZMZ0 732 aa18.81■□□□□ 0.6
VIM-204ENST00000478746 RALGPS2Q86X27 583 aaPredicted RBP18.81■□□□□ 0.6
VIM-204ENST00000478746 APPL2Q8NEU8 664 aa18.81■□□□□ 0.6
VIM-204ENST00000478746 RSPRY1Q96DX4 576 aa18.81■□□□□ 0.6
VIM-204ENST00000478746 SUSD3Q96L08 255 aa18.81■□□□□ 0.6
VIM-204ENST00000478746 C2orf42Q9NWW7 574 aa18.81■□□□□ 0.6
VIM-204ENST00000478746 PDCD11Q14690 1871 aaKnown RBP18.81■□□□□ 0.6
VIM-204ENST00000478746 MYBPHLA2RUH7 354 aa18.8■□□□□ 0.6
VIM-204ENST00000478746 SPECC1L-ADORA2AF8WAN1 911 aa18.8■□□□□ 0.6
VIM-204ENST00000478746 ZNF806P0C7X5 589 aa18.8■□□□□ 0.6
VIM-204ENST00000478746 CPB1P15086 417 aa18.8■□□□□ 0.6
VIM-204ENST00000478746 KCNE1P15382 129 aa18.8■□□□□ 0.6
VIM-204ENST00000478746 RPA1P27694 616 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms