RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 WDR5BQ86VZ2 330 aa15.91■□□□□ 0.14
USP11-207ENST00000478596 IRF7Q92985 503 aa15.91■□□□□ 0.14
USP11-207ENST00000478596 EPSTI1Q96J88 318 aa15.91■□□□□ 0.14
USP11-207ENST00000478596 ZSWIM4Q9H7M6 989 aa15.91■□□□□ 0.14
USP11-207ENST00000478596 BRD9Q9H8M2 597 aa15.91■□□□□ 0.14
USP11-207ENST00000478596 DDX19AQ9NUU7 478 aaKnown RBP15.91■□□□□ 0.14
USP11-207ENST00000478596 DNMT3BQ9UBC3 853 aaKnown RBP15.91■□□□□ 0.14
USP11-207ENST00000478596 LAMA1P25391 3075 aa15.91■□□□□ 0.14
USP11-207ENST00000478596 MYH11P35749 1972 aa15.91■□□□□ 0.14
USP11-207ENST00000478596 FREM2Q5SZK8 3169 aa15.9■□□□□ 0.14
USP11-207ENST00000478596 A0A1B0GVL5 298 aa15.9■□□□□ 0.14
USP11-207ENST00000478596 A0A1W2PQ27 194 aa15.9■□□□□ 0.14
USP11-207ENST00000478596 A0A1W2PQ64 194 aa15.9■□□□□ 0.14
USP11-207ENST00000478596 A0A1W2PQD8 194 aa15.9■□□□□ 0.14
USP11-207ENST00000478596 ARL5CA6NH57 179 aa15.9■□□□□ 0.14
USP11-207ENST00000478596 MED24O75448 989 aa15.9■□□□□ 0.14
USP11-207ENST00000478596 PFKFB1P16118 471 aa15.9■□□□□ 0.14
USP11-207ENST00000478596 PLCG1P19174 1290 aa15.9■□□□□ 0.14
USP11-207ENST00000478596 RPA1P27694 616 aa15.9■□□□□ 0.14
USP11-207ENST00000478596 MLLT6P55198 1093 aaPredicted RBP15.9■□□□□ 0.14
USP11-207ENST00000478596 UVSSAQ2YD98 709 aa15.9■□□□□ 0.14
USP11-207ENST00000478596 AXDND1Q5T1B0 1012 aaPredicted RBP15.9■□□□□ 0.14
USP11-207ENST00000478596 RRAGBQ5VZM2 374 aa15.9■□□□□ 0.14
USP11-207ENST00000478596 SHC4Q6S5L8 630 aa15.9■□□□□ 0.14
USP11-207ENST00000478596 CLEC17AQ6ZS10 378 aa15.9■□□□□ 0.14
USP11-207ENST00000478596 RTL10Q7L3V2 364 aa15.9■□□□□ 0.14
USP11-207ENST00000478596 CACNA2D4Q7Z3S7 1137 aa15.9■□□□□ 0.14
USP11-207ENST00000478596 MAP4K3Q8IVH8 894 aa15.9■□□□□ 0.14
USP11-207ENST00000478596 CNNM3Q8NE01 707 aa15.9■□□□□ 0.14
USP11-207ENST00000478596 ING5Q8WYH8 240 aa15.9■□□□□ 0.14
USP11-207ENST00000478596 DHX58Q96C10 678 aa15.9■□□□□ 0.14
USP11-207ENST00000478596 MCRS1Q96EZ8 462 aa15.9■□□□□ 0.14
USP11-207ENST00000478596 CLSTN3Q9BQT9 956 aa15.9■□□□□ 0.14
USP11-207ENST00000478596 PYM1Q9BRP8 204 aaKnown RBP15.9■□□□□ 0.14
USP11-207ENST00000478596 POLR3CQ9BUI4 534 aaPredicted RBP15.9■□□□□ 0.14
USP11-207ENST00000478596 TRMT61BQ9BVS5 477 aaKnown RBP15.9■□□□□ 0.14
USP11-207ENST00000478596 VPS45Q9NRW7 570 aa15.9■□□□□ 0.14
USP11-207ENST00000478596 HCFC1R1Q9NWW0 138 aa15.9■□□□□ 0.14
USP11-207ENST00000478596 ADAM28Q9UKQ2 775 aa15.9■□□□□ 0.14
USP11-207ENST00000478596 KIAA1024Q9UPX6 916 aa15.9■□□□□ 0.14
USP11-207ENST00000478596 MRPS23Q9Y3D9 190 aaKnown RBP15.9■□□□□ 0.14
USP11-207ENST00000478596 PIAS3Q9Y6X2 628 aa15.9■□□□□ 0.14
USP11-207ENST00000478596 DOCK6Q96HP0 2047 aa15.89■□□□□ 0.13
USP11-207ENST00000478596 ARHGEF35A5YM69 484 aa15.89■□□□□ 0.13
USP11-207ENST00000478596 SLC26A4O43511 780 aa15.89■□□□□ 0.13
USP11-207ENST00000478596 CEACAM1P13688 526 aa15.89■□□□□ 0.13
USP11-207ENST00000478596 PTMSP20962 102 aa15.89■□□□□ 0.13
USP11-207ENST00000478596 CMA1P23946 247 aa15.89■□□□□ 0.13
USP11-207ENST00000478596 FCARP24071 287 aa15.89■□□□□ 0.13
USP11-207ENST00000478596 HOXA11P31270 313 aaPredicted RBP15.89■□□□□ 0.13
USP11-207ENST00000478596 SYKP43405 635 aa15.89■□□□□ 0.13
USP11-207ENST00000478596 LRRC32Q14392 662 aa15.89■□□□□ 0.13
USP11-207ENST00000478596 RTP2Q5QGT7 225 aa15.89■□□□□ 0.13
USP11-207ENST00000478596 POTEHQ6S545 545 aa15.89■□□□□ 0.13
USP11-207ENST00000478596 PRSS55Q6UWB4 352 aaPredicted RBP15.89■□□□□ 0.13
USP11-207ENST00000478596 B3GNT9Q6UX72 402 aa15.89■□□□□ 0.13
USP11-207ENST00000478596 USP49Q70CQ1 688 aa15.89■□□□□ 0.13
USP11-207ENST00000478596 CATSPER3Q86XQ3 398 aa15.89■□□□□ 0.13
USP11-207ENST00000478596 RHPN2Q8IUC4 686 aa15.89■□□□□ 0.13
USP11-207ENST00000478596 CEP57L1Q8IYX8 460 aa15.89■□□□□ 0.13
USP11-207ENST00000478596 SLC7A14Q8TBB6 771 aa15.89■□□□□ 0.13
USP11-207ENST00000478596 GAB3Q8WWW8 586 aa15.89■□□□□ 0.13
USP11-207ENST00000478596 CCDC34Q96HJ3 373 aa15.89■□□□□ 0.13
USP11-207ENST00000478596 CEP89Q96ST8 783 aa15.89■□□□□ 0.13
USP11-207ENST00000478596 PANK2Q9BZ23 570 aa15.89■□□□□ 0.13
USP11-207ENST00000478596 CCSER1Q9C0I3 900 aa15.89■□□□□ 0.13
USP11-207ENST00000478596 IFT122Q9HBG6 1241 aa15.89■□□□□ 0.13
USP11-207ENST00000478596 ZNF334Q9HCZ1 680 aaPredicted RBP15.89■□□□□ 0.13
USP11-207ENST00000478596 AVENQ9NQS1 362 aaPredicted RBP15.89■□□□□ 0.13
USP11-207ENST00000478596 ANKFY1Q9P2R3 1169 aa15.89■□□□□ 0.13
USP11-207ENST00000478596 NEUROG3Q9Y4Z2 214 aa15.89■□□□□ 0.13
USP11-207ENST00000478596 GADD45BO75293 160 aaPredicted RBP15.88■□□□□ 0.13
USP11-207ENST00000478596 ITGA4P13612 1032 aa15.88■□□□□ 0.13
USP11-207ENST00000478596 MPLP40238 635 aa15.88■□□□□ 0.13
USP11-207ENST00000478596 GRM2Q14416 872 aa15.88■□□□□ 0.13
USP11-207ENST00000478596 DHX8Q14562 1220 aaKnown RBP15.88■□□□□ 0.13
USP11-207ENST00000478596 MTERF2Q49AM1 385 aa15.88■□□□□ 0.13
USP11-207ENST00000478596 XKR3Q5GH77 459 aa15.88■□□□□ 0.13
USP11-207ENST00000478596 SH3PXD2AQ5TCZ1 1133 aa15.88■□□□□ 0.13
USP11-207ENST00000478596 PLA2G4FQ68DD2 849 aa15.88■□□□□ 0.13
USP11-207ENST00000478596 OTUD6AQ7L8S5 288 aa15.88■□□□□ 0.13
USP11-207ENST00000478596 SMG8Q8ND04 991 aaKnown RBP15.88■□□□□ 0.13
USP11-207ENST00000478596 NACC1Q96RE7 527 aa15.88■□□□□ 0.13
USP11-207ENST00000478596 GAD1Q99259 594 aa15.88■□□□□ 0.13
USP11-207ENST00000478596 NIFKQ9BYG3 293 aaKnown RBP15.88■□□□□ 0.13
USP11-207ENST00000478596 SUCLA2Q9P2R7 463 aaPredicted RBP15.88■□□□□ 0.13
USP11-207ENST00000478596 DNM3Q9UQ16 869 aa15.88■□□□□ 0.13
USP11-207ENST00000478596 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.87■□□□□ 0.13
USP11-207ENST00000478596 POLR2DO15514 142 aaKnown RBP15.87■□□□□ 0.13
USP11-207ENST00000478596 KRT18P05783 430 aaKnown RBP15.87■□□□□ 0.13
USP11-207ENST00000478596 CSRP1P21291 193 aaKnown RBP15.87■□□□□ 0.13
USP11-207ENST00000478596 MUTP22033 750 aa15.87■□□□□ 0.13
USP11-207ENST00000478596 YWHABP31946 246 aaKnown RBP15.87■□□□□ 0.13
USP11-207ENST00000478596 MCM4P33991 863 aa15.87■□□□□ 0.13
USP11-207ENST00000478596 MLH1P40692 756 aa15.87■□□□□ 0.13
USP11-207ENST00000478596 SCNN1GP51170 649 aa15.87■□□□□ 0.13
USP11-207ENST00000478596 SLC5A9Q2M3M2 681 aa15.87■□□□□ 0.13
USP11-207ENST00000478596 TMEM119Q4V9L6 283 aa15.87■□□□□ 0.13
USP11-207ENST00000478596 XKR9Q5GH70 373 aa15.87■□□□□ 0.13
USP11-207ENST00000478596 DAB2IPQ5VWQ8 1189 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms