RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 PLPP4Q5VZY2 271 aa28.98■■■□□ 2.23
CCM2-211ENST00000478582 FUT10Q6P4F1 479 aa28.98■■■□□ 2.23
CCM2-211ENST00000478582 TMC7Q7Z402 723 aa28.98■■■□□ 2.23
CCM2-211ENST00000478582 VPS52Q8N1B4 723 aa28.98■■■□□ 2.23
CCM2-211ENST00000478582 MLKLQ8NB16 471 aa28.98■■■□□ 2.23
CCM2-211ENST00000478582 CDCA3Q99618 268 aaPredicted RBP28.98■■■□□ 2.23
CCM2-211ENST00000478582 FAM50BQ9Y247 325 aa28.98■■■□□ 2.23
CCM2-211ENST00000478582 FSD2A1L4K1 749 aa28.97■■■□□ 2.23
CCM2-211ENST00000478582 PER2O15055 1255 aa28.97■■■□□ 2.23
CCM2-211ENST00000478582 SOD2P04179 222 aa28.97■■■□□ 2.23
CCM2-211ENST00000478582 NDUFV1P49821 464 aa28.97■■■□□ 2.23
CCM2-211ENST00000478582 FKBP3Q00688 224 aaKnown RBP28.97■■■□□ 2.23
CCM2-211ENST00000478582 ELAVL2Q12926 359 aaKnown RBP28.97■■■□□ 2.23
CCM2-211ENST00000478582 DUSP6Q16828 381 aa28.97■■■□□ 2.23
CCM2-211ENST00000478582 WDR49Q8IV35 697 aa28.97■■■□□ 2.23
CCM2-211ENST00000478582 C3orf58Q8NDZ4 430 aa28.97■■■□□ 2.23
CCM2-211ENST00000478582 HERC2P3Q9BVR0 1158 aa28.97■■■□□ 2.23
CCM2-211ENST00000478582 GPR62Q9BZJ7 368 aa28.97■■■□□ 2.23
CCM2-211ENST00000478582 ZBP1Q9H171 429 aa28.97■■■□□ 2.23
CCM2-211ENST00000478582 INTS13Q9NVM9 706 aa28.97■■■□□ 2.23
CCM2-211ENST00000478582 DPP3Q9NY33 737 aa28.97■■■□□ 2.23
CCM2-211ENST00000478582 SF3B1O75533 1304 aaKnown RBP eCLIP28.96■■■□□ 2.232e-7■■■■■ 82.1
CCM2-211ENST00000478582 ANO9A1A5B4 782 aa28.96■■■□□ 2.23
CCM2-211ENST00000478582 CETN3O15182 167 aa28.96■■■□□ 2.23
CCM2-211ENST00000478582 CTSAP10619 480 aa28.96■■■□□ 2.23
CCM2-211ENST00000478582 IGFBP6P24592 240 aaPredicted RBP28.96■■■□□ 2.23
CCM2-211ENST00000478582 GUCY2FP51841 1108 aa28.96■■■□□ 2.23
CCM2-211ENST00000478582 MCCD1P59942 119 aaPredicted RBP28.96■■■□□ 2.23
CCM2-211ENST00000478582 TFAMQ00059 246 aaKnown RBP28.96■■■□□ 2.23
CCM2-211ENST00000478582 CEP135Q66GS9 1140 aa28.96■■■□□ 2.23
CCM2-211ENST00000478582 NELFBQ8WX92 580 aa28.96■■■□□ 2.23
CCM2-211ENST00000478582 FNBP1Q96RU3 617 aa28.96■■■□□ 2.23
CCM2-211ENST00000478582 CGRRF1Q99675 332 aa28.96■■■□□ 2.23
CCM2-211ENST00000478582 MKNK1Q9BUB5 465 aa28.96■■■□□ 2.23
CCM2-211ENST00000478582 GZF1Q9H116 711 aaPredicted RBP28.96■■■□□ 2.23
CCM2-211ENST00000478582 CHST7Q9NS84 486 aa28.96■■■□□ 2.23
CCM2-211ENST00000478582 IRAK3Q9Y616 596 aa28.96■■■□□ 2.23
CCM2-211ENST00000478582 BICDL2A1A5D9 508 aa28.95■■■□□ 2.22
CCM2-211ENST00000478582 TRIM49BA6NDI0 452 aa28.95■■■□□ 2.22
CCM2-211ENST00000478582 PIRO00625 290 aa28.95■■■□□ 2.22
CCM2-211ENST00000478582 AKAP3O75969 853 aa28.95■■■□□ 2.22
CCM2-211ENST00000478582 PAX3P23760 479 aa28.95■■■□□ 2.22
CCM2-211ENST00000478582 PSMC2P35998 433 aaKnown RBP28.95■■■□□ 2.22
CCM2-211ENST00000478582 NLRP12P59046 1061 aa28.95■■■□□ 2.22
CCM2-211ENST00000478582 CLDN10P78369 228 aa28.95■■■□□ 2.22
CCM2-211ENST00000478582 ENPEPQ07075 957 aa28.95■■■□□ 2.22
CCM2-211ENST00000478582 BMS1Q14692 1282 aaKnown RBP28.95■■■□□ 2.22
CCM2-211ENST00000478582 C9orf57Q5W0N0 161 aa28.95■■■□□ 2.22
CCM2-211ENST00000478582 KLHL10Q6JEL2 608 aa28.95■■■□□ 2.22
CCM2-211ENST00000478582 TTI2Q6NXR4 508 aa28.95■■■□□ 2.22
CCM2-211ENST00000478582 GPR65Q8IYL9 337 aa28.95■■■□□ 2.22
CCM2-211ENST00000478582 MRPL43Q8N983 215 aaKnown RBP28.95■■■□□ 2.22
CCM2-211ENST00000478582 TMC2Q8TDI7 906 aa28.95■■■□□ 2.22
CCM2-211ENST00000478582 PARD3BQ8TEW8 1205 aa28.95■■■□□ 2.22
CCM2-211ENST00000478582 MSLNLQ96KJ4 702 aa28.95■■■□□ 2.22
CCM2-211ENST00000478582 CLEC1BQ9P126 229 aa28.95■■■□□ 2.22
CCM2-211ENST00000478582 CD207Q9UJ71 328 aa28.95■■■□□ 2.22
CCM2-211ENST00000478582 HIDE1A8MVS5 230 aa28.94■■■□□ 2.22
CCM2-211ENST00000478582 TRAPPC3O43617 180 aa28.94■■■□□ 2.22
CCM2-211ENST00000478582 GLP2RO95838 553 aa28.94■■■□□ 2.22
CCM2-211ENST00000478582 PAK1Q13153 545 aa28.94■■■□□ 2.22
CCM2-211ENST00000478582 SMC1AQ14683 1233 aaKnown RBP28.94■■■□□ 2.22
CCM2-211ENST00000478582 DUOXA2Q1HG44 320 aa28.94■■■□□ 2.22
CCM2-211ENST00000478582 KLHL40Q2TBA0 621 aa28.94■■■□□ 2.22
CCM2-211ENST00000478582 TAS1R1Q7RTX1 841 aa28.94■■■□□ 2.22
CCM2-211ENST00000478582 TMEM130Q8N3G9 435 aa28.94■■■□□ 2.22
CCM2-211ENST00000478582 PLEKHO2Q8TD55 490 aa28.94■■■□□ 2.22
CCM2-211ENST00000478582 HASPINQ8TF76 798 aa28.94■■■□□ 2.22
CCM2-211ENST00000478582 CCDC127Q96BQ5 260 aa28.94■■■□□ 2.22
CCM2-211ENST00000478582 ANKRD36BP1Q96IX9 119 aa28.94■■■□□ 2.22
CCM2-211ENST00000478582 DUSP9Q99956 384 aaKnown RBP28.94■■■□□ 2.22
CCM2-211ENST00000478582 TMEM63CQ9P1W3 806 aa28.94■■■□□ 2.22
CCM2-211ENST00000478582 PTPRJQ12913 1337 aa28.94■■■□□ 2.22
CCM2-211ENST00000478582 MBTPS2O43462 519 aa28.93■■■□□ 2.22
CCM2-211ENST00000478582 TMEM191BP0C7N4 346 aa28.93■■■□□ 2.22
CCM2-211ENST00000478582 CLUL1Q15846 466 aa28.93■■■□□ 2.22
CCM2-211ENST00000478582 USP41Q3LFD5 358 aa28.93■■■□□ 2.22
CCM2-211ENST00000478582 FAM186BQ8IYM0 893 aa28.93■■■□□ 2.22
CCM2-211ENST00000478582 C1orf127Q8N9H9 656 aa28.93■■■□□ 2.22
CCM2-211ENST00000478582 CXorf38Q8TB03 319 aa28.93■■■□□ 2.22
CCM2-211ENST00000478582 ITGA11Q9UKX5 1188 aa28.93■■■□□ 2.22
CCM2-211ENST00000478582 CTNND2Q9UQB3 1225 aa28.93■■■□□ 2.22
CCM2-211ENST00000478582 LILRB3O75022 631 aa28.92■■■□□ 2.22
CCM2-211ENST00000478582 CXCL14O95715 111 aa28.92■■■□□ 2.22
CCM2-211ENST00000478582 DLATP10515 647 aaKnown RBP28.92■■■□□ 2.22
CCM2-211ENST00000478582 TNNI1P19237 187 aa28.92■■■□□ 2.22
CCM2-211ENST00000478582 AARSP49588 968 aaKnown RBP eCLIP28.92■■■□□ 2.22
CCM2-211ENST00000478582 DSG1Q02413 1049 aa28.92■■■□□ 2.22
CCM2-211ENST00000478582 SMAD4Q13485 552 aaKnown RBP28.92■■■□□ 2.22
CCM2-211ENST00000478582 KIAA0319Q5VV43 1072 aa28.92■■■□□ 2.22
CCM2-211ENST00000478582 INTS8Q75QN2 995 aaKnown RBP28.92■■■□□ 2.22
CCM2-211ENST00000478582 OR5B17Q8NGF7 314 aa28.92■■■□□ 2.22
CCM2-211ENST00000478582 CEP63Q96MT8 703 aa28.92■■■□□ 2.22
CCM2-211ENST00000478582 POP1Q99575 1024 aaKnown RBP28.92■■■□□ 2.22
CCM2-211ENST00000478582 MTMR12Q9C0I1 747 aa28.92■■■□□ 2.22
CCM2-211ENST00000478582 RWDD2AQ9UIY3 292 aa28.92■■■□□ 2.22
CCM2-211ENST00000478582 SSX2IPQ9Y2D8 614 aa28.92■■■□□ 2.22
CCM2-211ENST00000478582 NUB1Q9Y5A7 615 aa28.92■■■□□ 2.22
CCM2-211ENST00000478582 C2orf71A6NGG8 1288 aa28.91■■■□□ 2.22
CCM2-211ENST00000478582 PPEF2O14830 753 aa28.91■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms