RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 RIN2Q8WYP3 895 aaPredicted RBP5.24□□□□□ -1.57
CDC42BPA-212ENST00000478573 JADE3Q92613 823 aa5.24□□□□□ -1.57
CDC42BPA-212ENST00000478573 AIFM3Q96NN9 605 aa5.24□□□□□ -1.57
CDC42BPA-212ENST00000478573 PRDM13Q9H4Q3 707 aa5.24□□□□□ -1.57
CDC42BPA-212ENST00000478573 NOX1Q9Y5S8 564 aa5.24□□□□□ -1.57
CDC42BPA-212ENST00000478573 IFT140Q96RY7 1462 aa5.24□□□□□ -1.57
CDC42BPA-212ENST00000478573 COL11A2P13942 1736 aaPredicted RBP5.23□□□□□ -1.57
CDC42BPA-212ENST00000478573 GOLGA6CA6NDK9 693 aa5.23□□□□□ -1.57
CDC42BPA-212ENST00000478573 GOLGA6BA6NDN3 693 aa5.23□□□□□ -1.57
CDC42BPA-212ENST00000478573 PJA2O43164 708 aa5.23□□□□□ -1.57
CDC42BPA-212ENST00000478573 CFIP05156 583 aa5.23□□□□□ -1.57
CDC42BPA-212ENST00000478573 CT47B1P0C2W7 299 aaPredicted RBP5.23□□□□□ -1.57
CDC42BPA-212ENST00000478573 GOLGA6DP0CG33 693 aa5.23□□□□□ -1.57
CDC42BPA-212ENST00000478573 RAP2AP10114 183 aa5.23□□□□□ -1.57
CDC42BPA-212ENST00000478573 PF4V1P10720 104 aa5.23□□□□□ -1.57
CDC42BPA-212ENST00000478573 CYP2C19P33261 490 aa5.23□□□□□ -1.57
CDC42BPA-212ENST00000478573 SLC5A3P53794 718 aa5.23□□□□□ -1.57
CDC42BPA-212ENST00000478573 PER3P56645 1201 aa5.23□□□□□ -1.57
CDC42BPA-212ENST00000478573 BLOC1S1P78537 153 aa5.23□□□□□ -1.57
CDC42BPA-212ENST00000478573 GTF2H3Q13889 308 aa5.23□□□□□ -1.57
CDC42BPA-212ENST00000478573 MLC1Q15049 377 aa5.23□□□□□ -1.57
CDC42BPA-212ENST00000478573 CLUL1Q15846 466 aa5.23□□□□□ -1.57
CDC42BPA-212ENST00000478573 MUM1Q2TAK8 710 aa5.23□□□□□ -1.57
CDC42BPA-212ENST00000478573 FAM47AQ5JRC9 791 aa5.23□□□□□ -1.57
CDC42BPA-212ENST00000478573 TOR2AQ5JU69 321 aa5.23□□□□□ -1.57
CDC42BPA-212ENST00000478573 AGAP9Q5VTM2 703 aa5.23□□□□□ -1.57
CDC42BPA-212ENST00000478573 METRNLQ641Q3 311 aa5.23□□□□□ -1.57
CDC42BPA-212ENST00000478573 SP5Q6BEB4 398 aaPredicted RBP5.23□□□□□ -1.57
CDC42BPA-212ENST00000478573 CCSAPQ6IQ19 270 aaPredicted RBP5.23□□□□□ -1.57
CDC42BPA-212ENST00000478573 MAPKAPK5Q8IW41 473 aa5.23□□□□□ -1.57
CDC42BPA-212ENST00000478573 TRMT2AQ8IZ69 625 aaKnown RBP5.23□□□□□ -1.57
CDC42BPA-212ENST00000478573 RNF31Q96EP0 1072 aa5.23□□□□□ -1.57
CDC42BPA-212ENST00000478573 HSPBAP1Q96EW2 488 aa5.23□□□□□ -1.57
CDC42BPA-212ENST00000478573 ZSWIM1Q9BR11 485 aa5.23□□□□□ -1.57
CDC42BPA-212ENST00000478573 ALOXE3Q9BYJ1 711 aa5.23□□□□□ -1.57
CDC42BPA-212ENST00000478573 KIAA1586Q9HCI6 787 aa5.23□□□□□ -1.57
CDC42BPA-212ENST00000478573 GOLGA6AQ9NYA3 693 aa5.23□□□□□ -1.57
CDC42BPA-212ENST00000478573 CCDC194A0A1B0GVG4 234 aa5.22□□□□□ -1.57
CDC42BPA-212ENST00000478573 MARCH11A6NNE9 402 aa5.22□□□□□ -1.57
CDC42BPA-212ENST00000478573 PRPF3O43395 683 aaKnown RBP5.22□□□□□ -1.57
CDC42BPA-212ENST00000478573 ESRRBO95718 433 aa5.22□□□□□ -1.57
CDC42BPA-212ENST00000478573 EGR2P11161 476 aaPredicted RBP5.22□□□□□ -1.57
CDC42BPA-212ENST00000478573 ATF3P18847 181 aa5.22□□□□□ -1.57
CDC42BPA-212ENST00000478573 FDXRP22570 491 aa5.22□□□□□ -1.57
CDC42BPA-212ENST00000478573 ECHS1P30084 290 aa5.22□□□□□ -1.57
CDC42BPA-212ENST00000478573 GNALP38405 381 aa5.22□□□□□ -1.57
CDC42BPA-212ENST00000478573 ADKP55263 362 aaKnown RBP5.22□□□□□ -1.57
CDC42BPA-212ENST00000478573 ANO4Q32M45 955 aa5.22□□□□□ -1.57
CDC42BPA-212ENST00000478573 PRR16Q569H4 304 aa5.22□□□□□ -1.57
CDC42BPA-212ENST00000478573 RRP12Q5JTH9 1297 aaKnown RBP5.22□□□□□ -1.57
CDC42BPA-212ENST00000478573 C14orf80Q86SX3 495 aa5.22□□□□□ -1.57
CDC42BPA-212ENST00000478573 TPH2Q8IWU9 490 aa5.22□□□□□ -1.57
CDC42BPA-212ENST00000478573 RHOT2Q8IXI1 618 aa5.22□□□□□ -1.57
CDC42BPA-212ENST00000478573 BOLLQ8N9W6 283 aaKnown RBP5.22□□□□□ -1.57
CDC42BPA-212ENST00000478573 SIMC1Q8NDZ2 872 aa5.22□□□□□ -1.57
CDC42BPA-212ENST00000478573 AUTS2Q8WXX7 1259 aa5.22□□□□□ -1.57
CDC42BPA-212ENST00000478573 REXO4Q9GZR2 422 aaKnown RBP5.22□□□□□ -1.57
CDC42BPA-212ENST00000478573 QRSL1Q9H0R6 528 aaKnown RBP5.22□□□□□ -1.57
CDC42BPA-212ENST00000478573 COX11Q9Y6N1 276 aa5.22□□□□□ -1.57
CDC42BPA-212ENST00000478573 ABCA5Q8WWZ7 1642 aa5.22□□□□□ -1.57
CDC42BPA-212ENST00000478573 C5AR1P21730 350 aa5.21□□□□□ -1.58
CDC42BPA-212ENST00000478573 LPOP22079 712 aaPredicted RBP5.21□□□□□ -1.58
CDC42BPA-212ENST00000478573 AKAP5P24588 427 aa5.21□□□□□ -1.58
CDC42BPA-212ENST00000478573 ACAP2Q15057 778 aa5.21□□□□□ -1.58
CDC42BPA-212ENST00000478573 GFOD2Q3B7J2 385 aa5.21□□□□□ -1.58
CDC42BPA-212ENST00000478573 ARMC6Q6NXE6 501 aa5.21□□□□□ -1.58
CDC42BPA-212ENST00000478573 EPM2AIP1Q7L775 607 aaPredicted RBP5.21□□□□□ -1.58
CDC42BPA-212ENST00000478573 ZNF572Q7Z3I7 529 aaPredicted RBP5.21□□□□□ -1.58
CDC42BPA-212ENST00000478573 OR7D4Q8NG98 312 aa5.21□□□□□ -1.58
CDC42BPA-212ENST00000478573 CAGE1Q8TC20 777 aa5.21□□□□□ -1.58
CDC42BPA-212ENST00000478573 TSPEARQ8WU66 669 aa5.21□□□□□ -1.58
CDC42BPA-212ENST00000478573 Q96MF0 132 aa5.21□□□□□ -1.58
CDC42BPA-212ENST00000478573 KLHL11Q9NVR0 708 aa5.21□□□□□ -1.58
CDC42BPA-212ENST00000478573 GABBR1Q9UBS5 961 aa5.21□□□□□ -1.58
CDC42BPA-212ENST00000478573 TLK1Q9UKI8 766 aa5.21□□□□□ -1.58
CDC42BPA-212ENST00000478573 NOB1Q9ULX3 412 aaKnown RBP5.21□□□□□ -1.58
CDC42BPA-212ENST00000478573 TOP2BQ02880 1626 aa5.21□□□□□ -1.58
CDC42BPA-212ENST00000478573 POLA1P09884 1462 aaPredicted RBP5.2□□□□□ -1.58
CDC42BPA-212ENST00000478573 CUX1P39880 1505 aa5.2□□□□□ -1.58
CDC42BPA-212ENST00000478573 CAND2O75155 1236 aa5.2□□□□□ -1.58
CDC42BPA-212ENST00000478573 IL33O95760 270 aa5.2□□□□□ -1.58
CDC42BPA-212ENST00000478573 ELANEP08246 267 aa5.2□□□□□ -1.58
CDC42BPA-212ENST00000478573 OSMP13725 252 aa5.2□□□□□ -1.58
CDC42BPA-212ENST00000478573 OCA2Q04671 838 aa5.2□□□□□ -1.58
CDC42BPA-212ENST00000478573 MINDY4Q4G0A6 757 aa5.2□□□□□ -1.58
CDC42BPA-212ENST00000478573 AFMIDQ63HM1 303 aa5.2□□□□□ -1.58
CDC42BPA-212ENST00000478573 FAM180AQ6UWF9 173 aa5.2□□□□□ -1.58
CDC42BPA-212ENST00000478573 GPR149Q86SP6 731 aa5.2□□□□□ -1.58
CDC42BPA-212ENST00000478573 DRC7Q8IY82 874 aa5.2□□□□□ -1.58
CDC42BPA-212ENST00000478573 PQLC1Q8N2U9 271 aa5.2□□□□□ -1.58
CDC42BPA-212ENST00000478573 TMEM132CQ8N3T6 1108 aa5.2□□□□□ -1.58
CDC42BPA-212ENST00000478573 GPR156Q8NFN8 814 aa5.2□□□□□ -1.58
CDC42BPA-212ENST00000478573 STON2Q8WXE9 905 aa5.2□□□□□ -1.58
CDC42BPA-212ENST00000478573 MRI1Q9BV20 369 aa5.2□□□□□ -1.58
CDC42BPA-212ENST00000478573 SPATA5L1Q9BVQ7 753 aa5.2□□□□□ -1.58
CDC42BPA-212ENST00000478573 SENP6Q9GZR1 1112 aaPredicted RBP5.2□□□□□ -1.58
CDC42BPA-212ENST00000478573 LDAHQ9H6V9 325 aa5.2□□□□□ -1.58
CDC42BPA-212ENST00000478573 BCO1Q9HAY6 547 aa5.2□□□□□ -1.58
CDC42BPA-212ENST00000478573 IFT122Q9HBG6 1241 aa5.2□□□□□ -1.58
CDC42BPA-212ENST00000478573 CASS4Q9NQ75 786 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms