RNA–Protein interactions for RNA: ENST00000478219.1

COL13A1-207, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 2,586 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-207ENST00000478219 GSTTP1A0A1W2PQM5 241 aa10.42□□□□□ -0.74
COL13A1-207ENST00000478219 TGFB1I1O43294 461 aa10.42□□□□□ -0.74
COL13A1-207ENST00000478219 ATF2P15336 505 aa10.42□□□□□ -0.74
COL13A1-207ENST00000478219 HADHBP55084 474 aaKnown RBP10.42□□□□□ -0.74
COL13A1-207ENST00000478219 MAP3K10Q02779 954 aa10.42□□□□□ -0.74
COL13A1-207ENST00000478219 LMNB2Q03252 620 aa10.42□□□□□ -0.74
COL13A1-207ENST00000478219 SFSWAPQ12872 951 aaKnown RBP10.42□□□□□ -0.74
COL13A1-207ENST00000478219 DLG1Q12959 904 aa10.42□□□□□ -0.74
COL13A1-207ENST00000478219 MSLNQ13421 630 aaPredicted RBP10.42□□□□□ -0.74
COL13A1-207ENST00000478219 STAT4Q14765 748 aa10.42□□□□□ -0.74
COL13A1-207ENST00000478219 ZRSR2Q15696 482 aaKnown RBP10.42□□□□□ -0.74
COL13A1-207ENST00000478219 CLUL1Q15846 466 aa10.42□□□□□ -0.74
COL13A1-207ENST00000478219 C12orf60Q5U649 245 aa10.42□□□□□ -0.74
COL13A1-207ENST00000478219 LPCAT4Q643R3 524 aa10.42□□□□□ -0.74
COL13A1-207ENST00000478219 PTF1AQ7RTS3 328 aa10.42□□□□□ -0.74
COL13A1-207ENST00000478219 ST13P4Q8IZP2 240 aaPredicted RBP10.42□□□□□ -0.74
COL13A1-207ENST00000478219 SKA1Q96BD8 255 aa10.42□□□□□ -0.74
COL13A1-207ENST00000478219 KLF6Q99612 283 aaPredicted RBP10.42□□□□□ -0.74
COL13A1-207ENST00000478219 PCDHGB4Q9UN71 923 aa10.42□□□□□ -0.74
COL13A1-207ENST00000478219 PCDHGB5Q9Y5G0 923 aa10.42□□□□□ -0.74
COL13A1-207ENST00000478219 SPATA31A1Q5TZJ5 1347 aa10.42□□□□□ -0.74
COL13A1-207ENST00000478219 MAST2Q6P0Q8 1798 aa10.41□□□□□ -0.74
COL13A1-207ENST00000478219 TMEM221A6NGB7 291 aa10.41□□□□□ -0.74
COL13A1-207ENST00000478219 USP17L5A8MUK1 530 aa10.41□□□□□ -0.74
COL13A1-207ENST00000478219 GOLGA8RI6L899 631 aa10.41□□□□□ -0.74
COL13A1-207ENST00000478219 ZWINTO95229 277 aa10.41□□□□□ -0.74
COL13A1-207ENST00000478219 HNRNPCP07910 306 aaKnown RBP eCLIP10.41□□□□□ -0.74
COL13A1-207ENST00000478219 CCDC166P0CW27 439 aa10.41□□□□□ -0.74
COL13A1-207ENST00000478219 ESRRAP11474 423 aaPredicted RBP10.41□□□□□ -0.74
COL13A1-207ENST00000478219 CDK4P11802 303 aa10.41□□□□□ -0.74
COL13A1-207ENST00000478219 VARSP26640 1264 aaKnown RBP10.41□□□□□ -0.74
COL13A1-207ENST00000478219 IL6STP40189 918 aaPredicted RBP10.41□□□□□ -0.74
COL13A1-207ENST00000478219 MAGEA4P43358 317 aa10.41□□□□□ -0.74
COL13A1-207ENST00000478219 FMO5P49326 533 aa10.41□□□□□ -0.74
COL13A1-207ENST00000478219 EMP3P54852 163 aa10.41□□□□□ -0.74
COL13A1-207ENST00000478219 GPC5P78333 572 aa10.41□□□□□ -0.74
COL13A1-207ENST00000478219 CBX3Q13185 183 aa10.41□□□□□ -0.74
COL13A1-207ENST00000478219 PTK6Q13882 451 aa10.41□□□□□ -0.74
COL13A1-207ENST00000478219 R3HDM1Q15032 1099 aaKnown RBP10.41□□□□□ -0.74
COL13A1-207ENST00000478219 PCNX4Q63HM2 1172 aa10.41□□□□□ -0.74
COL13A1-207ENST00000478219 ALYREFQ86V81 257 aaKnown RBP10.41□□□□□ -0.74
COL13A1-207ENST00000478219 TREML1Q86YW5 311 aa10.41□□□□□ -0.74
COL13A1-207ENST00000478219 ZNF34Q8IZ26 560 aa10.41□□□□□ -0.74
COL13A1-207ENST00000478219 GLIS1Q8NBF1 620 aa10.41□□□□□ -0.74
COL13A1-207ENST00000478219 CFAP61Q8NHU2 1237 aa10.41□□□□□ -0.74
COL13A1-207ENST00000478219 PIGBQ92521 554 aa10.41□□□□□ -0.74
COL13A1-207ENST00000478219 SLCO2A1Q92959 643 aa10.41□□□□□ -0.74
COL13A1-207ENST00000478219 RBM15Q96T37 977 aaKnown RBP eCLIP10.41□□□□□ -0.74
COL13A1-207ENST00000478219 TRAIPQ9BWF2 469 aa10.41□□□□□ -0.74
COL13A1-207ENST00000478219 TMEM120AQ9BXJ8 343 aa10.41□□□□□ -0.74
COL13A1-207ENST00000478219 LRRC4BQ9NT99 713 aa10.41□□□□□ -0.74
COL13A1-207ENST00000478219 ANKFY1Q9P2R3 1169 aa10.41□□□□□ -0.74
COL13A1-207ENST00000478219 SLC17A7Q9P2U7 560 aa10.41□□□□□ -0.74
COL13A1-207ENST00000478219 TDRKHQ9Y2W6 561 aaKnown RBP10.41□□□□□ -0.74
COL13A1-207ENST00000478219 STRCP1A6NGW2 1772 aa10.41□□□□□ -0.74
COL13A1-207ENST00000478219 H3BRJ5 948 aa10.41□□□□□ -0.74
COL13A1-207ENST00000478219 PDXKO00764 312 aa10.41□□□□□ -0.74
COL13A1-207ENST00000478219 MARCH6O60337 910 aa10.41□□□□□ -0.74
COL13A1-207ENST00000478219 BANF1O75531 89 aa10.41□□□□□ -0.74
COL13A1-207ENST00000478219 KRT4P19013 534 aa10.41□□□□□ -0.74
COL13A1-207ENST00000478219 PCSK6P29122 969 aa10.41□□□□□ -0.74
COL13A1-207ENST00000478219 KCNQ4P56696 695 aa10.41□□□□□ -0.74
COL13A1-207ENST00000478219 TMED1Q13445 227 aa10.41□□□□□ -0.74
COL13A1-207ENST00000478219 EFTUD2Q15029 972 aaKnown RBP eCLIP10.41□□□□□ -0.74
COL13A1-207ENST00000478219 HYIQ5T013 277 aa10.41□□□□□ -0.74
COL13A1-207ENST00000478219 CC2D2BQ6DHV5 1058 aa10.41□□□□□ -0.74
COL13A1-207ENST00000478219 DNAJC14Q6Y2X3 702 aaPredicted RBP10.41□□□□□ -0.74
COL13A1-207ENST00000478219 SYT2Q8N9I0 419 aaPredicted RBP10.41□□□□□ -0.74
COL13A1-207ENST00000478219 RBM15BQ8NDT2 890 aaKnown RBP10.41□□□□□ -0.74
COL13A1-207ENST00000478219 KAT5Q92993 513 aa10.41□□□□□ -0.74
COL13A1-207ENST00000478219 PPP2R3CQ969Q6 453 aa10.41□□□□□ -0.74
COL13A1-207ENST00000478219 SLC35B4Q969S0 331 aa10.41□□□□□ -0.74
COL13A1-207ENST00000478219 OLFM3Q96PB7 478 aa10.41□□□□□ -0.74
COL13A1-207ENST00000478219 POLR3CQ9BUI4 534 aaPredicted RBP10.41□□□□□ -0.74
COL13A1-207ENST00000478219 HEMGNQ9BXL5 484 aa10.41□□□□□ -0.74
COL13A1-207ENST00000478219 NMUR2Q9GZQ4 415 aa10.41□□□□□ -0.74
COL13A1-207ENST00000478219 INTS2Q9H0H0 1204 aaKnown RBP10.41□□□□□ -0.74
COL13A1-207ENST00000478219 WNT8AQ9H1J5 351 aa10.41□□□□□ -0.74
COL13A1-207ENST00000478219 USP29Q9HBJ7 922 aa10.41□□□□□ -0.74
COL13A1-207ENST00000478219 ARHGEF38Q9NXL2 777 aa10.41□□□□□ -0.74
COL13A1-207ENST00000478219 NDE1Q9NXR1 346 aa10.41□□□□□ -0.74
COL13A1-207ENST00000478219 SLC7A8Q9UHI5 535 aa10.41□□□□□ -0.74
COL13A1-207ENST00000478219 NEU2Q9Y3R4 380 aa10.41□□□□□ -0.74
COL13A1-207ENST00000478219 TAF1LQ8IZX4 1826 aa10.41□□□□□ -0.74
COL13A1-207ENST00000478219 SHANK3Q9BYB0 1731 aa10.4□□□□□ -0.74
COL13A1-207ENST00000478219 B2RBV5 119 aa10.4□□□□□ -0.74
COL13A1-207ENST00000478219 E5RJQ4 531 aa10.4□□□□□ -0.74
COL13A1-207ENST00000478219 BOLA2-SMG1P6H3BVE0 249 aa10.4□□□□□ -0.74
COL13A1-207ENST00000478219 FSCN2O14926 492 aa10.4□□□□□ -0.74
COL13A1-207ENST00000478219 SORBS3O60504 671 aa10.4□□□□□ -0.74
COL13A1-207ENST00000478219 SORBS2O94875 1100 aaKnown RBP10.4□□□□□ -0.74
COL13A1-207ENST00000478219 GCNT3O95395 438 aa10.4□□□□□ -0.74
COL13A1-207ENST00000478219 STARD3NLO95772 234 aa10.4□□□□□ -0.74
COL13A1-207ENST00000478219 PLS3P13797 630 aa10.4□□□□□ -0.74
COL13A1-207ENST00000478219 AQP4P55087 323 aa10.4□□□□□ -0.74
COL13A1-207ENST00000478219 IZUMO3Q5VZ72 239 aa10.4□□□□□ -0.74
COL13A1-207ENST00000478219 FBXL19Q6PCT2 694 aa10.4□□□□□ -0.74
COL13A1-207ENST00000478219 PAOXQ6QHF9 649 aa10.4□□□□□ -0.74
COL13A1-207ENST00000478219 RBM44Q6ZP01 1051 aaKnown RBP10.4□□□□□ -0.74
COL13A1-207ENST00000478219 ACAD11Q709F0 780 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms