RNA–Protein interactions for RNA: ENST00000478196.6

RPS27A-208, Transcript of ribosomal protein S27a, human

TSL 2

Gene RPS27A, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPS27A-208	ENST00000478196	RPGR	Q92834	1020 aa	Known RBP	5	□□□□□ -1.61
RPS27A-208	ENST00000478196	PGBD4	Q96DM1	585 aa		5	□□□□□ -1.61
RPS27A-208	ENST00000478196	RBM17	Q96I25	401 aa	Known RBP	5	□□□□□ -1.61
RPS27A-208	ENST00000478196	SUCLG2	Q96I99	432 aa		5	□□□□□ -1.61
RPS27A-208	ENST00000478196	IPO9	Q96P70	1041 aa	Known RBP	5	□□□□□ -1.61
RPS27A-208	ENST00000478196	CDC6	Q99741	560 aa		5	□□□□□ -1.61
RPS27A-208	ENST00000478196	SPATA9	Q9BWV2	254 aa		5	□□□□□ -1.61
RPS27A-208	ENST00000478196	API5	Q9BZZ5	524 aa	Known RBP	5	□□□□□ -1.61
RPS27A-208	ENST00000478196	GREM2	Q9H772	168 aa		5	□□□□□ -1.61
RPS27A-208	ENST00000478196	RCAN3	Q9UKA8	241 aa		5	□□□□□ -1.61
RPS27A-208	ENST00000478196	ATP6V0A2	Q9Y487	856 aa		5	□□□□□ -1.61
RPS27A-208	ENST00000478196	PCDHA9	Q9Y5H5	950 aa		5	□□□□□ -1.61
RPS27A-208	ENST00000478196	GRXCR1	A8MXD5	290 aa		4.99	□□□□□ -1.61
RPS27A-208	ENST00000478196	INO80B-WBP1	J3KQ70	363 aa		4.99	□□□□□ -1.61
RPS27A-208	ENST00000478196	IPO8	O15397	1037 aa	Known RBP	4.99	□□□□□ -1.61
RPS27A-208	ENST00000478196	PLIN1	O60240	522 aa		4.99	□□□□□ -1.61
RPS27A-208	ENST00000478196	ZNF37A	P17032	561 aa	Predicted RBP	4.99	□□□□□ -1.61
RPS27A-208	ENST00000478196	NR4A1	P22736	598 aa		4.99	□□□□□ -1.61
RPS27A-208	ENST00000478196	RFX5	P48382	616 aa	Predicted RBP	4.99	□□□□□ -1.61
RPS27A-208	ENST00000478196	RPS8	P62241	208 aa	Known RBP	4.99	□□□□□ -1.61
RPS27A-208	ENST00000478196	GABRE	P78334	506 aa		4.99	□□□□□ -1.61
RPS27A-208	ENST00000478196	ALDH6A1	Q02252	535 aa	Known RBP	4.99	□□□□□ -1.61
RPS27A-208	ENST00000478196	CCDC152	Q4G0S7	254 aa		4.99	□□□□□ -1.61
RPS27A-208	ENST00000478196	TIGD2	Q4W5G0	525 aa		4.99	□□□□□ -1.61
RPS27A-208	ENST00000478196	NAIF1	Q69YI7	327 aa	Predicted RBP	4.99	□□□□□ -1.61
RPS27A-208	ENST00000478196	LMBR1L	Q6UX01	489 aa		4.99	□□□□□ -1.61
RPS27A-208	ENST00000478196	DDX46	Q7L014	1031 aa	Known RBP	4.99	□□□□□ -1.61
RPS27A-208	ENST00000478196	TMEM57	Q8N5G2	664 aa		4.99	□□□□□ -1.61
RPS27A-208	ENST00000478196	DLG3	Q92796	817 aa		4.99	□□□□□ -1.61
RPS27A-208	ENST00000478196	FRAT1	Q92837	279 aa	Predicted RBP	4.99	□□□□□ -1.61
RPS27A-208	ENST00000478196	MEIS3	Q99687	375 aa		4.99	□□□□□ -1.61
RPS27A-208	ENST00000478196	INO80B	Q9C086	356 aa	Predicted RBP	4.99	□□□□□ -1.61
RPS27A-208	ENST00000478196	BICC1	Q9H694	974 aa	Known RBP	4.99	□□□□□ -1.61
RPS27A-208	ENST00000478196	SYNPO2L	Q9H987	977 aa		4.99	□□□□□ -1.61
RPS27A-208	ENST00000478196	CYP4F11	Q9HBI6	524 aa		4.99	□□□□□ -1.61
RPS27A-208	ENST00000478196	B3GALT1	Q9Y5Z6	326 aa		4.99	□□□□□ -1.61
RPS27A-208	ENST00000478196	POLR2A	P24928	1970 aa	Known RBP	4.98	□□□□□ -1.61
RPS27A-208	ENST00000478196	TRBV23-1	A0A0A0MS06	115 aa		4.98	□□□□□ -1.61
RPS27A-208	ENST00000478196	KRTAP29-1	A8MX34	341 aa	Predicted RBP	4.98	□□□□□ -1.61
RPS27A-208	ENST00000478196	KIAA0355	O15063	1070 aa		4.98	□□□□□ -1.61
RPS27A-208	ENST00000478196	KLF4	O43474	513 aa		4.98	□□□□□ -1.61
RPS27A-208	ENST00000478196	RECQL4	O94761	1208 aa		4.98	□□□□□ -1.61
RPS27A-208	ENST00000478196	APP	P05067	770 aa		4.98	□□□□□ -1.61
RPS27A-208	ENST00000478196	C6orf222	P0C671	652 aa	Predicted RBP	4.98	□□□□□ -1.61
RPS27A-208	ENST00000478196	VSIG10L2	P0DP72	767 aa		4.98	□□□□□ -1.61
RPS27A-208	ENST00000478196	HSP90B1	P14625	803 aa	Known RBP	4.98	□□□□□ -1.61
RPS27A-208	ENST00000478196	ERCC5	P28715	1186 aa	Predicted RBP	4.98	□□□□□ -1.61
RPS27A-208	ENST00000478196	RBM25	P49756	843 aa	Known RBP	4.98	□□□□□ -1.61
RPS27A-208	ENST00000478196	GPSM2	P81274	684 aa		4.98	□□□□□ -1.61
RPS27A-208	ENST00000478196	TMEM132B	Q14DG7	1078 aa		4.98	□□□□□ -1.61
RPS27A-208	ENST00000478196	TM4SF20	Q53R12	229 aa		4.98	□□□□□ -1.61
RPS27A-208	ENST00000478196	CCDC93	Q567U6	631 aa		4.98	□□□□□ -1.61
RPS27A-208	ENST00000478196	PLEKHG4	Q58EX7	1191 aa		4.98	□□□□□ -1.61
RPS27A-208	ENST00000478196	C20orf194	Q5TEA3	1177 aa		4.98	□□□□□ -1.61
RPS27A-208	ENST00000478196	C1QL3	Q5VWW1	255 aa		4.98	□□□□□ -1.61
RPS27A-208	ENST00000478196	KRT40	Q6A162	431 aa		4.98	□□□□□ -1.61
RPS27A-208	ENST00000478196	MCF2L2	Q86YR7	1114 aa		4.98	□□□□□ -1.61
RPS27A-208	ENST00000478196	CISD2	Q8N5K1	135 aa	Known RBP	4.98	□□□□□ -1.61
RPS27A-208	ENST00000478196	MB21D1	Q8N884	522 aa		4.98	□□□□□ -1.61
RPS27A-208	ENST00000478196	ARL8A	Q96BM9	186 aa		4.98	□□□□□ -1.61
RPS27A-208	ENST00000478196	ZNF512	Q96ME7	567 aa	Predicted RBP	4.98	□□□□□ -1.61
RPS27A-208	ENST00000478196	PSMD1	Q99460	953 aa		4.98	□□□□□ -1.61
RPS27A-208	ENST00000478196	FOXB1	Q99853	325 aa		4.98	□□□□□ -1.61
RPS27A-208	ENST00000478196	RTFDC1	Q9BY42	306 aa	Predicted RBP	4.98	□□□□□ -1.61
RPS27A-208	ENST00000478196	C9orf78	Q9NZ63	289 aa	Predicted RBP	4.98	□□□□□ -1.61
RPS27A-208	ENST00000478196	POLL	Q9UGP5	575 aa		4.98	□□□□□ -1.61
RPS27A-208	ENST00000478196	LRRFIP2	Q9Y608	721 aa	Known RBP	4.98	□□□□□ -1.61
RPS27A-208	ENST00000478196	COX11	Q9Y6N1	276 aa		4.98	□□□□□ -1.61
RPS27A-208	ENST00000478196	CRTAM	O95727	393 aa		4.97	□□□□□ -1.61
RPS27A-208	ENST00000478196	JUN	P05412	331 aa	Known RBP	4.97	□□□□□ -1.61
RPS27A-208	ENST00000478196	TCF3	P15923	654 aa		4.97	□□□□□ -1.61
RPS27A-208	ENST00000478196	MTX1	Q13505	466 aa		4.97	□□□□□ -1.61
RPS27A-208	ENST00000478196	DGKD	Q16760	1214 aa		4.97	□□□□□ -1.61
RPS27A-208	ENST00000478196	DCAF17	Q5H9S7	520 aa	Predicted RBP	4.97	□□□□□ -1.61
RPS27A-208	ENST00000478196	SOGA3	Q5TF21	947 aa		4.97	□□□□□ -1.61
RPS27A-208	ENST00000478196	PLA2G15	Q8NCC3	412 aa		4.97	□□□□□ -1.61
RPS27A-208	ENST00000478196	KLHDC4	Q8TBB5	520 aa		4.97	□□□□□ -1.61
RPS27A-208	ENST00000478196	CPT1C	Q8TCG5	803 aa		4.97	□□□□□ -1.61
RPS27A-208	ENST00000478196	ST8SIA2	Q92186	375 aa		4.97	□□□□□ -1.61
RPS27A-208	ENST00000478196	ERCC4	Q92889	916 aa	Predicted RBP	4.97	□□□□□ -1.61
RPS27A-208	ENST00000478196	NKD2	Q969F2	451 aa	Predicted RBP	4.97	□□□□□ -1.61
RPS27A-208	ENST00000478196	E2F7	Q96AV8	911 aa		4.97	□□□□□ -1.61
RPS27A-208	ENST00000478196	C16orf92	Q96LL3	132 aa		4.97	□□□□□ -1.61
RPS27A-208	ENST00000478196	GPR101	Q96P66	508 aa	Predicted RBP	4.97	□□□□□ -1.61
RPS27A-208	ENST00000478196	PUS3	Q9BZE2	481 aa	Known RBP	4.97	□□□□□ -1.61
RPS27A-208	ENST00000478196	TAOK3	Q9H2K8	898 aa		4.97	□□□□□ -1.61
RPS27A-208	ENST00000478196	ZNF277	Q9NRM2	450 aa	Predicted RBP	4.97	□□□□□ -1.61
RPS27A-208	ENST00000478196	MAGEL2	Q9UJ55	1249 aa		4.97	□□□□□ -1.61
RPS27A-208	ENST00000478196	SORCS3	Q9UPU3	1222 aa		4.97	□□□□□ -1.61
RPS27A-208	ENST00000478196	RIPOR2	Q9Y4F9	1068 aa		4.97	□□□□□ -1.61
RPS27A-208	ENST00000478196	MYH13	Q9UKX3	1938 aa		4.97	□□□□□ -1.61
RPS27A-208	ENST00000478196	SCN4A	P35499	1836 aa		4.97	□□□□□ -1.61
RPS27A-208	ENST00000478196	ARAP2	Q8WZ64	1704 aa		4.97	□□□□□ -1.61
RPS27A-208	ENST00000478196	WDR90	Q96KV7	1748 aa		4.97	□□□□□ -1.61
RPS27A-208	ENST00000478196	MYO5A	Q9Y4I1	1855 aa	Known RBP	4.96	□□□□□ -1.61
RPS27A-208	ENST00000478196	AKAP11	Q9UKA4	1901 aa		4.96	□□□□□ -1.62
RPS27A-208	ENST00000478196	PNMA6E	A0A0J9YXQ4	647 aa		4.96	□□□□□ -1.62
RPS27A-208	ENST00000478196	SLC12A8	A0AV02	714 aa		4.96	□□□□□ -1.62
RPS27A-208	ENST00000478196	ANKRD18B	A2A2Z9	1011 aa		4.96	□□□□□ -1.62
RPS27A-208	ENST00000478196	YDJC	A8MPS7	323 aa		4.96	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms