RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 LRRC45Q96CN5 670 aa3.89□□□□□ -1.79
FNDC3B-209ENST00000478016 CLMNQ96JQ2 1002 aa3.89□□□□□ -1.79
FNDC3B-209ENST00000478016 NOX5Q96PH1 765 aa3.89□□□□□ -1.79
FNDC3B-209ENST00000478016 PLEKHG4BQ96PX9 1271 aa3.89□□□□□ -1.79
FNDC3B-209ENST00000478016 TMEM209Q96SK2 561 aa3.89□□□□□ -1.79
FNDC3B-209ENST00000478016 SH3GL1Q99961 368 aa3.89□□□□□ -1.79
FNDC3B-209ENST00000478016 KRTAP4-12Q9BQ66 201 aa3.89□□□□□ -1.79
FNDC3B-209ENST00000478016 ADPGKQ9BRR6 497 aa3.89□□□□□ -1.79
FNDC3B-209ENST00000478016 C11orf84Q9BUA3 381 aaPredicted RBP3.89□□□□□ -1.79
FNDC3B-209ENST00000478016 CAPS2Q9BXY5 557 aa3.89□□□□□ -1.79
FNDC3B-209ENST00000478016 TCF7L1Q9HCS4 588 aa3.89□□□□□ -1.79
FNDC3B-209ENST00000478016 CABP5Q9NP86 173 aa3.89□□□□□ -1.79
FNDC3B-209ENST00000478016 TOPORSQ9NS56 1045 aaPredicted RBP3.89□□□□□ -1.79
FNDC3B-209ENST00000478016 MRGBPQ9NV56 204 aa3.89□□□□□ -1.79
FNDC3B-209ENST00000478016 RIC8BQ9NVN3 520 aa3.89□□□□□ -1.79
FNDC3B-209ENST00000478016 NFKBIL1Q9UBC1 381 aaPredicted RBP3.89□□□□□ -1.79
FNDC3B-209ENST00000478016 CFDP1Q9UEE9 299 aaPredicted RBP3.89□□□□□ -1.79
FNDC3B-209ENST00000478016 GRID1Q9ULK0 1009 aa3.89□□□□□ -1.79
FNDC3B-209ENST00000478016 SUFUQ9UMX1 484 aa3.89□□□□□ -1.79
FNDC3B-209ENST00000478016 GPR52Q9Y2T5 361 aa3.89□□□□□ -1.79
FNDC3B-209ENST00000478016 MTF2Q9Y483 593 aaPredicted RBP3.89□□□□□ -1.79
FNDC3B-209ENST00000478016 CLRN2A0PK11 232 aa3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 GSG1L2A8MUP6 293 aa3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 H0Y626 953 aa3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 KCNK3O14649 394 aa3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 NDC80O14777 642 aa3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 POLR3GO15318 223 aaPredicted RBP3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 RNF113AO15541 343 aaKnown RBP3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 ZBTB14O43829 449 aa3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 FOXD2O60548 495 aaPredicted RBP3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 ZNF254O75437 659 aa3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 MAFO75444 373 aaPredicted RBP3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 DAB1O75553 588 aa3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 PALMO75781 387 aa3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 USP1O94782 785 aa3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 SASH1O94885 1247 aa3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 SMC2O95347 1197 aa3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 BAG4O95429 457 aaKnown RBP3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 PAHP00439 452 aa3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 CD4P01730 458 aa3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 SLC4A1P02730 911 aa3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 CYP1A2P05177 515 aa3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 S100A5P33763 92 aa3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 EVCP57679 992 aa3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 AP2B1P63010 937 aa3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 SMAD4Q13485 552 aaKnown RBP3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 MTMR1Q13613 665 aa3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 SCARB2Q14108 478 aa3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 GALEQ14376 348 aa3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 BECN1Q14457 450 aa3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 SYCP1Q15431 976 aa3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 ARHGAP44Q17R89 818 aa3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 KRTAP19-4Q3LI73 84 aa3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 TBC1D25Q3MII6 688 aa3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 SUPT20HL1Q3ZLR7 823 aa3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 CCDC152Q4G0S7 254 aa3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 VWA3BQ502W6 1294 aa3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 KRTCAP3Q53RY4 240 aa3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 PRR16Q569H4 304 aa3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 MEX3CQ5U5Q3 659 aaKnown RBP3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 PIK3R6Q5UE93 754 aa3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 SFMBT2Q5VUG0 894 aa3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 VASNQ6EMK4 673 aa3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 C1orf228Q6PIY5 440 aa3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 C4orf50Q6ZRC1 276 aa3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 INTS8Q75QN2 995 aaKnown RBP3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 SLC9B2Q86UD5 537 aa3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 LRRTM3Q86VH5 581 aa3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 KRTAP19-1Q8IUB9 90 aa3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 NRSN1Q8IZ57 195 aa3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 VPS52Q8N1B4 723 aa3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 LRRC43Q8N309 656 aa3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 PPM1KQ8N3J5 372 aa3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 LINC00469Q8N7U9 141 aa3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 LINC01356Q8N9X3 169 aa3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 CHST14Q8NCH0 376 aa3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 CCDC148Q8NFR7 591 aa3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 ACMSDQ8TDX5 336 aa3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 PARD3BQ8TEW8 1205 aa3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 STON2Q8WXE9 905 aa3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 TTC17Q96AE7 1141 aa3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 WNK4Q96J92 1243 aa3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 TNIP3Q96KP6 325 aa3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 COG8Q96MW5 612 aa3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 CLIC6Q96NY7 704 aa3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 RBM14Q96PK6 669 aaKnown RBP3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 WRNIP1Q96S55 665 aa3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 TREX2Q9BQ50 279 aaPredicted RBP3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 SYT3Q9BQG1 590 aa3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 EIF2AK1Q9BQI3 630 aaKnown RBP3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 NUDT16L1Q9BRJ7 211 aaKnown RBP3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 HERC2P3Q9BVR0 1158 aa3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 BOCQ9BWV1 1114 aa3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 KRTAP9-2Q9BYQ4 174 aa3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 KIAA1683Q9H0B3 1180 aa3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 CCDC68Q9H2F9 335 aa3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 MRPL46Q9H2W6 279 aaKnown RBP3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 CD93Q9NPY3 652 aa3.88□□□□□ -1.79
FNDC3B-209ENST00000478016 TRMT13Q9NUP7 481 aaKnown RBP3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms