RNA–Protein interactions for RNA: ENST00000477836.1

SMARCB1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2

Gene SMARCB1, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-206ENST00000477836 TEAD2Q15562 447 aa10.73□□□□□ -0.69
SMARCB1-206ENST00000477836 SLC27A1Q6PCB7 646 aa10.73□□□□□ -0.69
SMARCB1-206ENST00000477836 SYNE3Q6ZMZ3 975 aa10.73□□□□□ -0.69
SMARCB1-206ENST00000477836 DHX32Q7L7V1 743 aaKnown RBP10.73□□□□□ -0.69
SMARCB1-206ENST00000477836 FERMT3Q86UX7 667 aa10.73□□□□□ -0.69
SMARCB1-206ENST00000477836 REXO1Q8N1G1 1221 aaKnown RBP10.73□□□□□ -0.69
SMARCB1-206ENST00000477836 CEP170P1Q96L14 293 aa10.73□□□□□ -0.69
SMARCB1-206ENST00000477836 ZNF512Q96ME7 567 aaPredicted RBP10.73□□□□□ -0.69
SMARCB1-206ENST00000477836 RBM28Q9NW13 759 aaKnown RBP10.73□□□□□ -0.69
SMARCB1-206ENST00000477836 INVSQ9Y283 1065 aa10.73□□□□□ -0.69
SMARCB1-206ENST00000477836 RAXQ9Y2V3 346 aa10.73□□□□□ -0.69
SMARCB1-206ENST00000477836 INSL5Q9Y5Q6 135 aa10.73□□□□□ -0.69
SMARCB1-206ENST00000477836 BACE2Q9Y5Z0 518 aa10.73□□□□□ -0.69
SMARCB1-206ENST00000477836 ZMYM2Q9UBW7 1377 aa10.73□□□□□ -0.69
SMARCB1-206ENST00000477836 KIF26AQ9ULI4 1882 aaPredicted RBP10.72□□□□□ -0.69
SMARCB1-206ENST00000477836 ASCC3Q8N3C0 2202 aaKnown RBP10.72□□□□□ -0.69
SMARCB1-206ENST00000477836 PTGESO14684 152 aa10.72□□□□□ -0.69
SMARCB1-206ENST00000477836 PSMD10O75832 226 aa10.72□□□□□ -0.69
SMARCB1-206ENST00000477836 ABLIM3O94929 683 aa10.72□□□□□ -0.69
SMARCB1-206ENST00000477836 SEC24AO95486 1093 aa10.72□□□□□ -0.69
SMARCB1-206ENST00000477836 PRKCBP05771 671 aa10.72□□□□□ -0.69
SMARCB1-206ENST00000477836 THP07101 528 aa10.72□□□□□ -0.69
SMARCB1-206ENST00000477836 ATF2P15336 505 aa10.72□□□□□ -0.69
SMARCB1-206ENST00000477836 IGFBP6P24592 240 aaPredicted RBP10.72□□□□□ -0.69
SMARCB1-206ENST00000477836 PTENP60484 403 aa10.72□□□□□ -0.69
SMARCB1-206ENST00000477836 PSMC5P62195 406 aa10.72□□□□□ -0.69
SMARCB1-206ENST00000477836 FUT2Q10981 343 aa10.72□□□□□ -0.69
SMARCB1-206ENST00000477836 AMHR2Q16671 573 aa10.72□□□□□ -0.69
SMARCB1-206ENST00000477836 ANKS3Q6ZW76 656 aa10.72□□□□□ -0.69
SMARCB1-206ENST00000477836 CYP2U1Q7Z449 544 aa10.72□□□□□ -0.69
SMARCB1-206ENST00000477836 HAUS6Q7Z4H7 955 aa10.72□□□□□ -0.69
SMARCB1-206ENST00000477836 EXOC8Q8IYI6 725 aa10.72□□□□□ -0.69
SMARCB1-206ENST00000477836 TCEAL8Q8IYN2 117 aa10.72□□□□□ -0.69
SMARCB1-206ENST00000477836 MDM1Q8TC05 714 aa10.72□□□□□ -0.69
SMARCB1-206ENST00000477836 TCP11Q8WWU5 503 aa10.72□□□□□ -0.69
SMARCB1-206ENST00000477836 DDX27Q96GQ7 796 aaKnown RBP10.72□□□□□ -0.69
SMARCB1-206ENST00000477836 TCEANC2Q96MN5 208 aa10.72□□□□□ -0.69
SMARCB1-206ENST00000477836 TMEM209Q96SK2 561 aa10.72□□□□□ -0.69
SMARCB1-206ENST00000477836 GPR88Q9GZN0 384 aa10.72□□□□□ -0.69
SMARCB1-206ENST00000477836 CXCL16Q9H2A7 254 aa10.72□□□□□ -0.69
SMARCB1-206ENST00000477836 DHX33Q9H6R0 707 aaKnown RBP10.72□□□□□ -0.69
SMARCB1-206ENST00000477836 C6orf50Q9HD87 102 aa10.72□□□□□ -0.69
SMARCB1-206ENST00000477836 ASAH2Q9NR71 780 aa10.72□□□□□ -0.69
SMARCB1-206ENST00000477836 ATG2BQ96BY7 2078 aa10.72□□□□□ -0.69
SMARCB1-206ENST00000477836 CCDC194A0A1B0GVG4 234 aa10.71□□□□□ -0.69
SMARCB1-206ENST00000477836 I3L4J1 428 aa10.71□□□□□ -0.69
SMARCB1-206ENST00000477836 DPYSL4O14531 572 aa10.71□□□□□ -0.69
SMARCB1-206ENST00000477836 B4GALT5O43286 388 aa10.71□□□□□ -0.69
SMARCB1-206ENST00000477836 EDIL3O43854 480 aa10.71□□□□□ -0.69
SMARCB1-206ENST00000477836 RNF40O75150 1001 aa10.71□□□□□ -0.69
SMARCB1-206ENST00000477836 B3GAT3O94766 335 aa10.71□□□□□ -0.69
SMARCB1-206ENST00000477836 HSP90AA1P07900 732 aaKnown RBP10.71□□□□□ -0.69
SMARCB1-206ENST00000477836 RFC5P40937 340 aa10.71□□□□□ -0.69
SMARCB1-206ENST00000477836 MBTD1Q05BQ5 628 aa10.71□□□□□ -0.69
SMARCB1-206ENST00000477836 TNK2Q07912 1038 aa10.71□□□□□ -0.69
SMARCB1-206ENST00000477836 TWF1Q12792 350 aa10.71□□□□□ -0.69
SMARCB1-206ENST00000477836 LMAN2Q12907 356 aa10.71□□□□□ -0.69
SMARCB1-206ENST00000477836 EMC2Q15006 297 aa10.71□□□□□ -0.69
SMARCB1-206ENST00000477836 RTN1Q16799 776 aa10.71□□□□□ -0.69
SMARCB1-206ENST00000477836 ARHGAP29Q52LW3 1261 aa10.71□□□□□ -0.69
SMARCB1-206ENST00000477836 PMS2CLQ68D20 193 aa10.71□□□□□ -0.69
SMARCB1-206ENST00000477836 SLC8B1Q6J4K2 584 aa10.71□□□□□ -0.69
SMARCB1-206ENST00000477836 RAB44Q7Z6P3 723 aaPredicted RBP10.71□□□□□ -0.69
SMARCB1-206ENST00000477836 SHKBP1Q8TBC3 707 aa10.71□□□□□ -0.69
SMARCB1-206ENST00000477836 PIGKQ92643 395 aa10.71□□□□□ -0.69
SMARCB1-206ENST00000477836 LRRC3BQ96PB8 259 aa10.71□□□□□ -0.69
SMARCB1-206ENST00000477836 ZMYND12Q9H0C1 365 aa10.71□□□□□ -0.69
SMARCB1-206ENST00000477836 SCUBE2Q9NQ36 999 aa10.71□□□□□ -0.69
SMARCB1-206ENST00000477836 CEP72Q9P209 647 aa10.71□□□□□ -0.69
SMARCB1-206ENST00000477836 PCNX2A6NKB5 2137 aa10.7□□□□□ -0.7
SMARCB1-206ENST00000477836 A0A1W2PRU2 124 aa10.7□□□□□ -0.7
SMARCB1-206ENST00000477836 PLA2G2AP14555 144 aa10.7□□□□□ -0.7
SMARCB1-206ENST00000477836 DHPSP49366 369 aaPredicted RBP10.7□□□□□ -0.7
SMARCB1-206ENST00000477836 CLCNKBP51801 687 aa10.7□□□□□ -0.7
SMARCB1-206ENST00000477836 DGKEP52429 567 aa10.7□□□□□ -0.7
SMARCB1-206ENST00000477836 FAM193AP78312 1265 aa10.7□□□□□ -0.7
SMARCB1-206ENST00000477836 GRSF1Q12849 480 aaKnown RBP eCLIP10.7□□□□□ -0.7
SMARCB1-206ENST00000477836 SEMA3BQ13214 749 aa10.7□□□□□ -0.7
SMARCB1-206ENST00000477836 TFDP1Q14186 410 aa10.7□□□□□ -0.7
SMARCB1-206ENST00000477836 NAB2Q15742 525 aa10.7□□□□□ -0.7
SMARCB1-206ENST00000477836 PFKFB3Q16875 520 aaPredicted RBP10.7□□□□□ -0.7
SMARCB1-206ENST00000477836 ZNF423Q2M1K9 1284 aa10.7□□□□□ -0.7
SMARCB1-206ENST00000477836 ITPRIPL2Q3MIP1 535 aa10.7□□□□□ -0.7
SMARCB1-206ENST00000477836 TRIM61Q5EBN2 209 aa10.7□□□□□ -0.7
SMARCB1-206ENST00000477836 LARP1BQ659C4 914 aaKnown RBP10.7□□□□□ -0.7
SMARCB1-206ENST00000477836 FSTL4Q6MZW2 842 aa10.7□□□□□ -0.7
SMARCB1-206ENST00000477836 B3GNT9Q6UX72 402 aa10.7□□□□□ -0.7
SMARCB1-206ENST00000477836 Q6ZUG5 572 aa10.7□□□□□ -0.7
SMARCB1-206ENST00000477836 PIP4P1Q86T03 277 aa10.7□□□□□ -0.7
SMARCB1-206ENST00000477836 SGMS1Q86VZ5 419 aa10.7□□□□□ -0.7
SMARCB1-206ENST00000477836 LURAP1LQ8IV03 231 aa10.7□□□□□ -0.7
SMARCB1-206ENST00000477836 ARID3BQ8IVW6 561 aaPredicted RBP10.7□□□□□ -0.7
SMARCB1-206ENST00000477836 LEMD2Q8NC56 503 aa10.7□□□□□ -0.7
SMARCB1-206ENST00000477836 MTRQ99707 1265 aa10.7□□□□□ -0.7
SMARCB1-206ENST00000477836 NUSAP1Q9BXS6 441 aaKnown RBP10.7□□□□□ -0.7
SMARCB1-206ENST00000477836 LIMCH1Q9UPQ0 1083 aa10.7□□□□□ -0.7
SMARCB1-206ENST00000477836 THADAQ6YHU6 1953 aa10.7□□□□□ -0.7
SMARCB1-206ENST00000477836 ABCA7Q8IZY2 2146 aa10.69□□□□□ -0.7
SMARCB1-206ENST00000477836 A0A1B0GUA9 196 aa10.69□□□□□ -0.7
SMARCB1-206ENST00000477836 ESYT2A0FGR8 921 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms