RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 SCFD1Q8WVM8 642 aa19.17■□□□□ 0.66
PTPN7-209ENST00000477554 PYM1Q9BRP8 204 aaKnown RBP19.17■□□□□ 0.66
PTPN7-209ENST00000477554 SMOC2Q9H3U7 446 aa19.17■□□□□ 0.66
PTPN7-209ENST00000477554 SFXN1Q9H9B4 322 aa19.17■□□□□ 0.66
PTPN7-209ENST00000477554 MTRRQ9UBK8 725 aa19.17■□□□□ 0.66
PTPN7-209ENST00000477554 RAPGEFL1Q9UHV5 662 aa19.17■□□□□ 0.66
PTPN7-209ENST00000477554 CDY1Q9Y6F8 540 aa19.17■□□□□ 0.66
PTPN7-209ENST00000477554 FAM237AA0A1B0GTK4 181 aa19.16■□□□□ 0.66
PTPN7-209ENST00000477554 TGFB1I1O43294 461 aa19.16■□□□□ 0.66
PTPN7-209ENST00000477554 N4BP1O75113 896 aaKnown RBP19.16■□□□□ 0.66
PTPN7-209ENST00000477554 SLFN14P0C7P3 912 aa19.16■□□□□ 0.66
PTPN7-209ENST00000477554 LRPAP1P30533 357 aa19.16■□□□□ 0.66
PTPN7-209ENST00000477554 ITIH3Q06033 890 aa19.16■□□□□ 0.66
PTPN7-209ENST00000477554 FAM26FQ5R3K3 315 aa19.16■□□□□ 0.66
PTPN7-209ENST00000477554 SPATA1Q5VX52 437 aa19.16■□□□□ 0.66
PTPN7-209ENST00000477554 UNC13DQ70J99 1090 aa19.16■□□□□ 0.66
PTPN7-209ENST00000477554 GPR149Q86SP6 731 aa19.16■□□□□ 0.66
PTPN7-209ENST00000477554 SYCP3Q8IZU3 236 aa19.16■□□□□ 0.66
PTPN7-209ENST00000477554 KREMEN2Q8NCW0 462 aa19.16■□□□□ 0.66
PTPN7-209ENST00000477554 ST13P5Q8NFI4 369 aaPredicted RBP19.16■□□□□ 0.66
PTPN7-209ENST00000477554 NOC3LQ8WTT2 800 aaKnown RBP19.16■□□□□ 0.66
PTPN7-209ENST00000477554 SSX2IPQ9Y2D8 614 aa19.16■□□□□ 0.66
PTPN7-209ENST00000477554 PCDHB13Q9Y5F0 798 aa19.16■□□□□ 0.66
PTPN7-209ENST00000477554 PTPRJQ12913 1337 aa19.15■□□□□ 0.66
PTPN7-209ENST00000477554 PI4K2BG5E9Z4 385 aa19.15■□□□□ 0.66
PTPN7-209ENST00000477554 TBC1D4O60343 1298 aa19.15■□□□□ 0.66
PTPN7-209ENST00000477554 SCP2P22307 547 aa19.15■□□□□ 0.66
PTPN7-209ENST00000477554 RPL9P32969 192 aaKnown RBP19.15■□□□□ 0.66
PTPN7-209ENST00000477554 FAM160A1Q05DH4 1040 aa19.15■□□□□ 0.66
PTPN7-209ENST00000477554 LMBRD2Q68DH5 695 aaPredicted RBP19.15■□□□□ 0.66
PTPN7-209ENST00000477554 CES5AQ6NT32 575 aa19.15■□□□□ 0.66
PTPN7-209ENST00000477554 SUSD3Q96L08 255 aa19.15■□□□□ 0.66
PTPN7-209ENST00000477554 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.15■□□□□ 0.66
PTPN7-209ENST00000477554 FBXW11Q9UKB1 542 aa19.15■□□□□ 0.66
PTPN7-209ENST00000477554 UBQLN1Q9UMX0 589 aaKnown RBP19.15■□□□□ 0.66
PTPN7-209ENST00000477554 NUB1Q9Y5A7 615 aa19.15■□□□□ 0.66
PTPN7-209ENST00000477554 SPDYE4A6NLX3 237 aa19.14■□□□□ 0.65
PTPN7-209ENST00000477554 SYKP43405 635 aa19.14■□□□□ 0.65
PTPN7-209ENST00000477554 NTHL1P78549 312 aa19.14■□□□□ 0.65
PTPN7-209ENST00000477554 ELAVL2Q12926 359 aaKnown RBP19.14■□□□□ 0.65
PTPN7-209ENST00000477554 MRPL58Q14197 206 aaKnown RBP19.14■□□□□ 0.65
PTPN7-209ENST00000477554 TMEM132DQ14C87 1099 aa19.14■□□□□ 0.65
PTPN7-209ENST00000477554 C9orf57Q5W0N0 161 aa19.14■□□□□ 0.65
PTPN7-209ENST00000477554 SLFN12LQ6IEE8 588 aa19.14■□□□□ 0.65
PTPN7-209ENST00000477554 CBWD2Q8IUF1 395 aa19.14■□□□□ 0.65
PTPN7-209ENST00000477554 KIAA0895Q8NCT3 520 aa19.14■□□□□ 0.65
PTPN7-209ENST00000477554 NOTCH4Q99466 2003 aa19.14■□□□□ 0.65
PTPN7-209ENST00000477554 MYO10Q9HD67 2058 aa19.13■□□□□ 0.65
PTPN7-209ENST00000477554 WDR27A2RRH5 827 aa19.13■□□□□ 0.65
PTPN7-209ENST00000477554 CLIC2O15247 247 aa19.13■□□□□ 0.65
PTPN7-209ENST00000477554 OR4Q2P0C623 313 aa19.13■□□□□ 0.65
PTPN7-209ENST00000477554 ARPP19P56211 112 aa19.13■□□□□ 0.65
PTPN7-209ENST00000477554 AMPD3Q01432 767 aa19.13■□□□□ 0.65
PTPN7-209ENST00000477554 STK4Q13043 487 aa19.13■□□□□ 0.65
PTPN7-209ENST00000477554 KMT5BQ4FZB7 885 aa19.13■□□□□ 0.65
PTPN7-209ENST00000477554 GPR65Q8IYL9 337 aa19.13■□□□□ 0.65
PTPN7-209ENST00000477554 CEP57L1Q8IYX8 460 aa19.13■□□□□ 0.65
PTPN7-209ENST00000477554 ZNF507Q8TCN5 953 aa19.13■□□□□ 0.65
PTPN7-209ENST00000477554 GPT2Q8TD30 523 aa19.13■□□□□ 0.65
PTPN7-209ENST00000477554 TMEM209Q96SK2 561 aa19.13■□□□□ 0.65
PTPN7-209ENST00000477554 MAGEF1Q9HAY2 307 aa19.13■□□□□ 0.65
PTPN7-209ENST00000477554 PDE11AQ9HCR9 933 aa19.13■□□□□ 0.65
PTPN7-209ENST00000477554 FBXL5Q9UKA1 691 aa19.13■□□□□ 0.65
PTPN7-209ENST00000477554 EXOC7Q9UPT5 735 aa19.13■□□□□ 0.65
PTPN7-209ENST00000477554 ANO9A1A5B4 782 aa19.12■□□□□ 0.65
PTPN7-209ENST00000477554 PIRO00625 290 aa19.12■□□□□ 0.65
PTPN7-209ENST00000477554 NRG2O14511 850 aaPredicted RBP19.12■□□□□ 0.65
PTPN7-209ENST00000477554 VNN2O95498 520 aa19.12■□□□□ 0.65
PTPN7-209ENST00000477554 ASGR2P07307 311 aa19.12■□□□□ 0.65
PTPN7-209ENST00000477554 CYP3A5P20815 502 aa19.12■□□□□ 0.65
PTPN7-209ENST00000477554 GARTP22102 1010 aa19.12■□□□□ 0.65
PTPN7-209ENST00000477554 AARSP49588 968 aaKnown RBP eCLIP19.12■□□□□ 0.65
PTPN7-209ENST00000477554 ROR1Q01973 937 aa19.12■□□□□ 0.65
PTPN7-209ENST00000477554 RAB33AQ14088 237 aa19.12■□□□□ 0.65
PTPN7-209ENST00000477554 KYAT1Q16773 422 aa19.12■□□□□ 0.65
PTPN7-209ENST00000477554 KLHL40Q2TBA0 621 aa19.12■□□□□ 0.65
PTPN7-209ENST00000477554 ATAT1Q5SQI0 421 aa19.12■□□□□ 0.65
PTPN7-209ENST00000477554 ARMCX5Q6P1M9 558 aa19.12■□□□□ 0.65
PTPN7-209ENST00000477554 BRSK2Q8IWQ3 736 aa19.12■□□□□ 0.65
PTPN7-209ENST00000477554 FMR1NBQ8N0W7 255 aaPredicted RBP19.12■□□□□ 0.65
PTPN7-209ENST00000477554 ENGASEQ8NFI3 743 aa19.12■□□□□ 0.65
PTPN7-209ENST00000477554 CXorf38Q8TB03 319 aa19.12■□□□□ 0.65
PTPN7-209ENST00000477554 HCFC1R1Q9NWW0 138 aa19.12■□□□□ 0.65
PTPN7-209ENST00000477554 USP25Q9UHP3 1055 aa19.12■□□□□ 0.65
PTPN7-209ENST00000477554 M0QZQ0 153 aa19.11■□□□□ 0.65
PTPN7-209ENST00000477554 CCL16O15467 120 aa19.11■□□□□ 0.65
PTPN7-209ENST00000477554 ZMYND10O75800 440 aa19.11■□□□□ 0.65
PTPN7-209ENST00000477554 ZNF202O95125 648 aa19.11■□□□□ 0.65
PTPN7-209ENST00000477554 SEC24AO95486 1093 aa19.11■□□□□ 0.65
PTPN7-209ENST00000477554 ABCD1P33897 745 aa19.11■□□□□ 0.65
PTPN7-209ENST00000477554 MTHFRP42898 656 aa19.11■□□□□ 0.65
PTPN7-209ENST00000477554 LILRA4P59901 499 aa19.11■□□□□ 0.65
PTPN7-209ENST00000477554 SNW1Q13573 536 aaKnown RBP19.11■□□□□ 0.65
PTPN7-209ENST00000477554 SLC7A14Q8TBB6 771 aa19.11■□□□□ 0.65
PTPN7-209ENST00000477554 SMG7Q92540 1137 aaKnown RBP19.11■□□□□ 0.65
PTPN7-209ENST00000477554 RIPOR3Q96MK2 946 aa19.11■□□□□ 0.65
PTPN7-209ENST00000477554 POP1Q99575 1024 aaKnown RBP19.11■□□□□ 0.65
PTPN7-209ENST00000477554 LRRC27Q9C0I9 530 aa19.11■□□□□ 0.65
PTPN7-209ENST00000477554 GZF1Q9H116 711 aaPredicted RBP19.11■□□□□ 0.65
PTPN7-209ENST00000477554 AGPAT3Q9NRZ7 376 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms