RNA–Protein interactions for RNA: ENST00000477289.1

NSMCE4A-208, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE4A, Length 643 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-208ENST00000477289 DDAH1O94760 285 aa5.19□□□□□ -1.58
NSMCE4A-208ENST00000477289 PARP1P09874 1014 aaKnown RBP5.19□□□□□ -1.58
NSMCE4A-208ENST00000477289 ZNF28P17035 718 aa5.19□□□□□ -1.58
NSMCE4A-208ENST00000477289 VCAM1P19320 739 aa5.19□□□□□ -1.58
NSMCE4A-208ENST00000477289 HOXA7P31268 230 aaPredicted RBP5.19□□□□□ -1.58
NSMCE4A-208ENST00000477289 ACVRL1P37023 503 aa5.19□□□□□ -1.58
NSMCE4A-208ENST00000477289 CTCFP49711 727 aaPredicted RBP5.19□□□□□ -1.58
NSMCE4A-208ENST00000477289 GFRA1P56159 465 aa5.19□□□□□ -1.58
NSMCE4A-208ENST00000477289 PLS1Q14651 629 aa5.19□□□□□ -1.58
NSMCE4A-208ENST00000477289 PPP2R5BQ15173 497 aa5.19□□□□□ -1.58
NSMCE4A-208ENST00000477289 ASPRV1Q53RT3 343 aa5.19□□□□□ -1.58
NSMCE4A-208ENST00000477289 WDR78Q5VTH9 848 aa5.19□□□□□ -1.58
NSMCE4A-208ENST00000477289 RUFY3Q7L099 469 aa5.19□□□□□ -1.58
NSMCE4A-208ENST00000477289 SPRED1Q7Z699 444 aa5.19□□□□□ -1.58
NSMCE4A-208ENST00000477289 SPICE1Q8N0Z3 855 aa5.19□□□□□ -1.58
NSMCE4A-208ENST00000477289 LGI4Q8N135 537 aa5.19□□□□□ -1.58
NSMCE4A-208ENST00000477289 LRRC47Q8N1G4 583 aaKnown RBP5.19□□□□□ -1.58
NSMCE4A-208ENST00000477289 MB21D1Q8N884 522 aa5.19□□□□□ -1.58
NSMCE4A-208ENST00000477289 PRPF38AQ8NAV1 312 aaKnown RBP5.19□□□□□ -1.58
NSMCE4A-208ENST00000477289 TMEM145Q8NBT3 493 aa5.19□□□□□ -1.58
NSMCE4A-208ENST00000477289 ARRDC4Q8NCT1 418 aa5.19□□□□□ -1.58
NSMCE4A-208ENST00000477289 GMCL1P1Q8NEA9 526 aa5.19□□□□□ -1.58
NSMCE4A-208ENST00000477289 DVL3Q92997 716 aaPredicted RBP5.19□□□□□ -1.58
NSMCE4A-208ENST00000477289 ERO1AQ96HE7 468 aa5.19□□□□□ -1.58
NSMCE4A-208ENST00000477289 C12orf42Q96LP6 360 aa5.19□□□□□ -1.58
NSMCE4A-208ENST00000477289 LZTS2Q9BRK4 669 aa5.19□□□□□ -1.58
NSMCE4A-208ENST00000477289 TM6SF1Q9BZW5 370 aa5.19□□□□□ -1.58
NSMCE4A-208ENST00000477289 IL25Q9H293 177 aa5.19□□□□□ -1.58
NSMCE4A-208ENST00000477289 RPAP3Q9H6T3 665 aaPredicted RBP5.19□□□□□ -1.58
NSMCE4A-208ENST00000477289 PDRG1Q9NUG6 133 aa5.19□□□□□ -1.58
NSMCE4A-208ENST00000477289 RBM28Q9NW13 759 aaKnown RBP5.19□□□□□ -1.58
NSMCE4A-208ENST00000477289 SLC5A4Q9NY91 659 aa5.19□□□□□ -1.58
NSMCE4A-208ENST00000477289 SEC63Q9UGP8 760 aaKnown RBP5.19□□□□□ -1.58
NSMCE4A-208ENST00000477289 SNX14Q9Y5W7 946 aa5.19□□□□□ -1.58
NSMCE4A-208ENST00000477289 DOCK1Q14185 1865 aa5.19□□□□□ -1.58
NSMCE4A-208ENST00000477289 MYPNQ86TC9 1320 aa5.19□□□□□ -1.58
NSMCE4A-208ENST00000477289 UTRNP46939 3433 aa5.19□□□□□ -1.58
NSMCE4A-208ENST00000477289 CDK5RAP2Q96SN8 1893 aa5.18□□□□□ -1.58
NSMCE4A-208ENST00000477289 TCRBV5S2A0A599 114 aa5.18□□□□□ -1.58
NSMCE4A-208ENST00000477289 GOLGA8AA7E2F4 631 aa5.18□□□□□ -1.58
NSMCE4A-208ENST00000477289 GOLGA8BA8MQT2 603 aa5.18□□□□□ -1.58
NSMCE4A-208ENST00000477289 B4DLN1 442 aa5.18□□□□□ -1.58
NSMCE4A-208ENST00000477289 TMEM232C9JQI7 657 aa5.18□□□□□ -1.58
NSMCE4A-208ENST00000477289 H7BY64 318 aa5.18□□□□□ -1.58
NSMCE4A-208ENST00000477289 ZBTB43O43298 467 aa5.18□□□□□ -1.58
NSMCE4A-208ENST00000477289 TLR2O60603 784 aa5.18□□□□□ -1.58
NSMCE4A-208ENST00000477289 CDKL5O76039 1030 aa5.18□□□□□ -1.58
NSMCE4A-208ENST00000477289 CPP00450 1065 aa5.18□□□□□ -1.58
NSMCE4A-208ENST00000477289 RPS6KB1P23443 525 aa5.18□□□□□ -1.58
NSMCE4A-208ENST00000477289 GUCY1A2P33402 732 aa5.18□□□□□ -1.58
NSMCE4A-208ENST00000477289 LTBRP36941 435 aa5.18□□□□□ -1.58
NSMCE4A-208ENST00000477289 ETFBP38117 255 aa5.18□□□□□ -1.58
NSMCE4A-208ENST00000477289 LIFRP42702 1097 aa5.18□□□□□ -1.58
NSMCE4A-208ENST00000477289 MCM2P49736 904 aa5.18□□□□□ -1.58
NSMCE4A-208ENST00000477289 NEK4P51957 841 aa5.18□□□□□ -1.58
NSMCE4A-208ENST00000477289 MRPL12P52815 198 aaKnown RBP5.18□□□□□ -1.58
NSMCE4A-208ENST00000477289 NKX3-2P78367 333 aa5.18□□□□□ -1.58
NSMCE4A-208ENST00000477289 SP3Q02447 781 aa5.18□□□□□ -1.58
NSMCE4A-208ENST00000477289 RRP1BQ14684 758 aaKnown RBP5.18□□□□□ -1.58
NSMCE4A-208ENST00000477289 RABEP1Q15276 862 aa5.18□□□□□ -1.58
NSMCE4A-208ENST00000477289 CRB2Q5IJ48 1285 aa5.18□□□□□ -1.58
NSMCE4A-208ENST00000477289 EMC4Q5J8M3 183 aa5.18□□□□□ -1.58
NSMCE4A-208ENST00000477289 FAM83BQ5T0W9 1011 aa5.18□□□□□ -1.58
NSMCE4A-208ENST00000477289 CATSPERGQ6ZRH7 1159 aa5.18□□□□□ -1.58
NSMCE4A-208ENST00000477289 Q6ZUG5 572 aa5.18□□□□□ -1.58
NSMCE4A-208ENST00000477289 CYB5R4Q7L1T6 521 aa5.18□□□□□ -1.58
NSMCE4A-208ENST00000477289 CHST3Q7LGC8 479 aa5.18□□□□□ -1.58
NSMCE4A-208ENST00000477289 PPIL6Q8IXY8 311 aa5.18□□□□□ -1.58
NSMCE4A-208ENST00000477289 FAM43AQ8N2R8 423 aa5.18□□□□□ -1.58
NSMCE4A-208ENST00000477289 CHST13Q8NET6 341 aa5.18□□□□□ -1.58
NSMCE4A-208ENST00000477289 GPRC5AQ8NFJ5 357 aa5.18□□□□□ -1.58
NSMCE4A-208ENST00000477289 ACER1Q8TDN7 264 aa5.18□□□□□ -1.58
NSMCE4A-208ENST00000477289 BRI3BPQ8WY22 251 aa5.18□□□□□ -1.58
NSMCE4A-208ENST00000477289 ANKS1AQ92625 1134 aa5.18□□□□□ -1.58
NSMCE4A-208ENST00000477289 COA7Q96BR5 231 aa5.18□□□□□ -1.58
NSMCE4A-208ENST00000477289 MBD6Q96DN6 1003 aa5.18□□□□□ -1.58
NSMCE4A-208ENST00000477289 CCDC140Q96MF4 163 aa5.18□□□□□ -1.58
NSMCE4A-208ENST00000477289 MPHOSPH6Q99547 160 aaKnown RBP5.18□□□□□ -1.58
NSMCE4A-208ENST00000477289 SLF1Q9BQI6 1058 aa5.18□□□□□ -1.58
NSMCE4A-208ENST00000477289 TMEM47Q9BQJ4 181 aa5.18□□□□□ -1.58
NSMCE4A-208ENST00000477289 PAGR1Q9BTK6 254 aa5.18□□□□□ -1.58
NSMCE4A-208ENST00000477289 CDIP1Q9H305 208 aa5.18□□□□□ -1.58
NSMCE4A-208ENST00000477289 NGRNQ9NPE2 291 aaKnown RBP5.18□□□□□ -1.58
NSMCE4A-208ENST00000477289 INCENPQ9NQS7 918 aa5.18□□□□□ -1.58
NSMCE4A-208ENST00000477289 RNF186Q9NXI6 227 aa5.18□□□□□ -1.58
NSMCE4A-208ENST00000477289 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.18□□□□□ -1.58
NSMCE4A-208ENST00000477289 PRKAG3Q9UGI9 489 aa5.18□□□□□ -1.58
NSMCE4A-208ENST00000477289 FBXO40Q9UH90 709 aa5.18□□□□□ -1.58
NSMCE4A-208ENST00000477289 WASF3Q9UPY6 502 aa5.18□□□□□ -1.58
NSMCE4A-208ENST00000477289 RABGAP1Q9Y3P9 1069 aa5.18□□□□□ -1.58
NSMCE4A-208ENST00000477289 KIF3AQ9Y496 699 aa5.18□□□□□ -1.58
NSMCE4A-208ENST00000477289 PCDHA2Q9Y5H9 948 aa5.18□□□□□ -1.58
NSMCE4A-208ENST00000477289 IGKV6D-41A0A0C4DH26 115 aa5.17□□□□□ -1.58
NSMCE4A-208ENST00000477289 KLF18A0A0U1RQI7 1052 aa5.17□□□□□ -1.58
NSMCE4A-208ENST00000477289 A0A1W2PRG0 241 aa5.17□□□□□ -1.58
NSMCE4A-208ENST00000477289 KLRF2D3W0D1 207 aa5.17□□□□□ -1.58
NSMCE4A-208ENST00000477289 SH2B2O14492 632 aaPredicted RBP5.17□□□□□ -1.58
NSMCE4A-208ENST00000477289 HGSO14964 777 aaPredicted RBP5.17□□□□□ -1.58
NSMCE4A-208ENST00000477289 B4GALT3O60512 393 aa5.17□□□□□ -1.58
NSMCE4A-208ENST00000477289 NMT2O60551 498 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms