RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-215ENST00000476664 TRIM38O00635 465 aa7.73□□□□□ -1.17
LRCH3-215ENST00000476664 DDNO94850 711 aaPredicted RBP7.73□□□□□ -1.17
LRCH3-215ENST00000476664 PRPF6O94906 941 aaKnown RBP7.73□□□□□ -1.17
LRCH3-215ENST00000476664 CBX7O95931 251 aa7.73□□□□□ -1.17
LRCH3-215ENST00000476664 SYPP08247 313 aa7.73□□□□□ -1.17
LRCH3-215ENST00000476664 TGFB3P10600 412 aa7.73□□□□□ -1.17
LRCH3-215ENST00000476664 BCRP11274 1271 aa7.73□□□□□ -1.17
LRCH3-215ENST00000476664 EPXP11678 715 aa7.73□□□□□ -1.17
LRCH3-215ENST00000476664 FGFR2P21802 821 aa7.73□□□□□ -1.17
LRCH3-215ENST00000476664 HMGB2P26583 209 aaKnown RBP7.73□□□□□ -1.17
LRCH3-215ENST00000476664 CHRNA5P30532 468 aa7.73□□□□□ -1.17
LRCH3-215ENST00000476664 CTNNA1P35221 906 aaKnown RBP7.73□□□□□ -1.17
LRCH3-215ENST00000476664 MAN2A2P49641 1150 aa7.73□□□□□ -1.17
LRCH3-215ENST00000476664 CCT2P78371 535 aaKnown RBP7.73□□□□□ -1.17
LRCH3-215ENST00000476664 NKX6-1P78426 367 aaPredicted RBP7.73□□□□□ -1.17
LRCH3-215ENST00000476664 MAPK7Q13164 816 aa7.73□□□□□ -1.17
LRCH3-215ENST00000476664 TUSC3Q13454 348 aa7.73□□□□□ -1.17
LRCH3-215ENST00000476664 IL10RAQ13651 578 aa7.73□□□□□ -1.17
LRCH3-215ENST00000476664 SEPT2Q15019 361 aa7.73□□□□□ -1.17
LRCH3-215ENST00000476664 NR0B2Q15466 257 aa7.73□□□□□ -1.17
LRCH3-215ENST00000476664 ADRM1Q16186 407 aa7.73□□□□□ -1.17
LRCH3-215ENST00000476664 TTC38Q5R3I4 469 aa7.73□□□□□ -1.17
LRCH3-215ENST00000476664 TANGO2Q6ICL3 276 aa7.73□□□□□ -1.17
LRCH3-215ENST00000476664 C8orf86Q6ZUL3 223 aa7.73□□□□□ -1.17
LRCH3-215ENST00000476664 MOGAT3Q86VF5 341 aa7.73□□□□□ -1.17
LRCH3-215ENST00000476664 CNTROBQ8N137 903 aa7.73□□□□□ -1.17
LRCH3-215ENST00000476664 ZMIZ2Q8NF64 920 aa7.73□□□□□ -1.17
LRCH3-215ENST00000476664 PIP4K2CQ8TBX8 421 aa7.73□□□□□ -1.17
LRCH3-215ENST00000476664 RFFLQ8WZ73 363 aa7.73□□□□□ -1.17
LRCH3-215ENST00000476664 IQCDQ96DY2 449 aa7.73□□□□□ -1.17
LRCH3-215ENST00000476664 C7orf26Q96N11 449 aa7.73□□□□□ -1.17
LRCH3-215ENST00000476664 MYL10Q9BUA6 226 aa7.73□□□□□ -1.17
LRCH3-215ENST00000476664 GPR62Q9BZJ7 368 aa7.73□□□□□ -1.17
LRCH3-215ENST00000476664 TAF1DQ9H5J8 278 aaPredicted RBP7.73□□□□□ -1.17
LRCH3-215ENST00000476664 LMBRD1Q9NUN5 540 aa7.73□□□□□ -1.17
LRCH3-215ENST00000476664 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.73□□□□□ -1.17
LRCH3-215ENST00000476664 ITGB1BP2Q9UKP3 347 aa7.73□□□□□ -1.17
LRCH3-215ENST00000476664 TMPRSS11EQ9UL52 423 aa7.73□□□□□ -1.17
LRCH3-215ENST00000476664 ZNF281Q9Y2X9 895 aa7.73□□□□□ -1.17
LRCH3-215ENST00000476664 DHX16O60231 1041 aaKnown RBP7.72□□□□□ -1.17
LRCH3-215ENST00000476664 BUB1BO60566 1050 aaPredicted RBP7.72□□□□□ -1.17
LRCH3-215ENST00000476664 APOL3O95236 402 aa7.72□□□□□ -1.17
LRCH3-215ENST00000476664 WISP1O95388 367 aa7.72□□□□□ -1.17
LRCH3-215ENST00000476664 HNRNPCP07910 306 aaKnown RBP eCLIP7.72□□□□□ -1.17
LRCH3-215ENST00000476664 KITP10721 976 aa7.72□□□□□ -1.17
LRCH3-215ENST00000476664 UBA7P41226 1012 aa7.72□□□□□ -1.17
LRCH3-215ENST00000476664 TUBP50607 506 aa7.72□□□□□ -1.17
LRCH3-215ENST00000476664 DRG2P55039 364 aaKnown RBP7.72□□□□□ -1.17
LRCH3-215ENST00000476664 CREMQ03060 361 aa7.72□□□□□ -1.17
LRCH3-215ENST00000476664 PLCB4Q15147 1175 aa7.72□□□□□ -1.17
LRCH3-215ENST00000476664 SEC23AQ15436 765 aa7.72□□□□□ -1.17
LRCH3-215ENST00000476664 SLC14A2Q15849 920 aa7.72□□□□□ -1.17
LRCH3-215ENST00000476664 TIGD6Q17RP2 521 aa7.72□□□□□ -1.17
LRCH3-215ENST00000476664 UVSSAQ2YD98 709 aa7.72□□□□□ -1.17
LRCH3-215ENST00000476664 FAM205BPQ63HN1 556 aa7.72□□□□□ -1.17
LRCH3-215ENST00000476664 KIAA1841Q6NSI8 718 aa7.72□□□□□ -1.17
LRCH3-215ENST00000476664 CNKSR3Q6P9H4 555 aa7.72□□□□□ -1.17
LRCH3-215ENST00000476664 CCDC129Q6ZRS4 1044 aa7.72□□□□□ -1.17
LRCH3-215ENST00000476664 KCTD1Q719H9 257 aa7.72□□□□□ -1.17
LRCH3-215ENST00000476664 ENOSF1Q7L5Y1 443 aa7.72□□□□□ -1.17
LRCH3-215ENST00000476664 C2CD5Q86YS7 1000 aa7.72□□□□□ -1.17
LRCH3-215ENST00000476664 FTSJ3Q8IY81 847 aaKnown RBP7.72□□□□□ -1.17
LRCH3-215ENST00000476664 CRIPAKQ8N1N5 446 aa7.72□□□□□ -1.17
LRCH3-215ENST00000476664 FAM71BQ8TC56 605 aa7.72□□□□□ -1.17
LRCH3-215ENST00000476664 HERVK_113Q902F9 699 aa7.72□□□□□ -1.17
LRCH3-215ENST00000476664 HTRA1Q92743 480 aa7.72□□□□□ -1.17
LRCH3-215ENST00000476664 GOLGA1Q92805 767 aa7.72□□□□□ -1.17
LRCH3-215ENST00000476664 CDADC1Q9BWV3 514 aa7.72□□□□□ -1.17
LRCH3-215ENST00000476664 CD244Q9BZW8 370 aa7.72□□□□□ -1.17
LRCH3-215ENST00000476664 PREBQ9HCU5 417 aa7.72□□□□□ -1.17
LRCH3-215ENST00000476664 SAYSD1Q9NPB0 183 aa7.72□□□□□ -1.17
LRCH3-215ENST00000476664 ATP13A2Q9NQ11 1180 aa7.72□□□□□ -1.17
LRCH3-215ENST00000476664 AP5S1Q9NUS5 200 aa7.72□□□□□ -1.17
LRCH3-215ENST00000476664 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.72□□□□□ -1.17
LRCH3-215ENST00000476664 NFKBIL1Q9UBC1 381 aaPredicted RBP7.72□□□□□ -1.17
LRCH3-215ENST00000476664 ORC3Q9UBD5 711 aaPredicted RBP7.72□□□□□ -1.17
LRCH3-215ENST00000476664 AFF4Q9UHB7 1163 aaKnown RBP7.72□□□□□ -1.17
LRCH3-215ENST00000476664 ISY1Q9ULR0 285 aaKnown RBP7.72□□□□□ -1.17
LRCH3-215ENST00000476664 CDY2AQ9Y6F7 541 aa7.72□□□□□ -1.17
LRCH3-215ENST00000476664 X6R8D5 127 aa7.72□□□□□ -1.17
LRCH3-215ENST00000476664 TRPM7Q96QT4 1865 aa7.72□□□□□ -1.17
LRCH3-215ENST00000476664 PGPEP1LA6NFU8 196 aa7.71□□□□□ -1.18
LRCH3-215ENST00000476664 FAM171A2A8MVW0 826 aa7.71□□□□□ -1.18
LRCH3-215ENST00000476664 ARHGAP6O43182 974 aa7.71□□□□□ -1.18
LRCH3-215ENST00000476664 GLULP15104 373 aa7.71□□□□□ -1.18
LRCH3-215ENST00000476664 PLA2G5P39877 138 aa7.71□□□□□ -1.18
LRCH3-215ENST00000476664 MCAMP43121 646 aa7.71□□□□□ -1.18
LRCH3-215ENST00000476664 NPTX2P47972 431 aa7.71□□□□□ -1.18
LRCH3-215ENST00000476664 SUMO3P55854 103 aaPredicted RBP7.71□□□□□ -1.18
LRCH3-215ENST00000476664 TRIM25Q14258 630 aaKnown RBP7.71□□□□□ -1.18
LRCH3-215ENST00000476664 MBTPS1Q14703 1052 aa7.71□□□□□ -1.18
LRCH3-215ENST00000476664 FBXO38Q6PIJ6 1188 aa7.71□□□□□ -1.18
LRCH3-215ENST00000476664 SNX32Q86XE0 403 aa7.71□□□□□ -1.18
LRCH3-215ENST00000476664 TOP6BLQ8N6T0 577 aa7.71□□□□□ -1.18
LRCH3-215ENST00000476664 CYP2W1Q8TAV3 490 aa7.71□□□□□ -1.18
LRCH3-215ENST00000476664 DPF3Q92784 378 aa7.71□□□□□ -1.18
LRCH3-215ENST00000476664 C18orf8Q96DM3 657 aa7.71□□□□□ -1.18
LRCH3-215ENST00000476664 ASIC4Q96FT7 647 aa7.71□□□□□ -1.18
LRCH3-215ENST00000476664 PRDM12Q9H4Q4 367 aa7.71□□□□□ -1.18
LRCH3-215ENST00000476664 GREM2Q9H772 168 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms