RNA–Protein interactions for RNA: ENST00000475213.1

SSR1-205, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3

Gene SSR1, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-205ENST00000475213 DNAJC19Q96DA6 116 aa13.34□□□□□ -0.27
SSR1-205ENST00000475213 MYADMQ96S97 322 aa13.34□□□□□ -0.27
SSR1-205ENST00000475213 MSTO1Q9BUK6 570 aa13.34□□□□□ -0.27
SSR1-205ENST00000475213 PANK2Q9BZ23 570 aa13.34□□□□□ -0.27
SSR1-205ENST00000475213 NUB1Q9Y5A7 615 aa13.34□□□□□ -0.27
SSR1-205ENST00000475213 GTF3C3Q9Y5Q9 886 aa13.34□□□□□ -0.27
SSR1-205ENST00000475213 ANKRD63C9JTQ0 380 aa13.33□□□□□ -0.28
SSR1-205ENST00000475213 SPTLC2O15270 562 aa13.33□□□□□ -0.28
SSR1-205ENST00000475213 CCL16O15467 120 aa13.33□□□□□ -0.28
SSR1-205ENST00000475213 TBC1D4O60343 1298 aa13.33□□□□□ -0.28
SSR1-205ENST00000475213 ADRB2P07550 413 aa13.33□□□□□ -0.28
SSR1-205ENST00000475213 HNRNPA1P09651 372 aaKnown RBP eCLIP13.33□□□□□ -0.28
SSR1-205ENST00000475213 LRPAP1P30533 357 aa13.33□□□□□ -0.28
SSR1-205ENST00000475213 HOXA9P31269 272 aa13.33□□□□□ -0.28
SSR1-205ENST00000475213 MCM4P33991 863 aa13.33□□□□□ -0.28
SSR1-205ENST00000475213 STAT6P42226 847 aa13.33□□□□□ -0.28
SSR1-205ENST00000475213 UVSSAQ2YD98 709 aa13.33□□□□□ -0.28
SSR1-205ENST00000475213 PPM1LQ5SGD2 360 aa13.33□□□□□ -0.28
SSR1-205ENST00000475213 FOXD4L5Q5VV16 416 aaPredicted RBP13.33□□□□□ -0.28
SSR1-205ENST00000475213 ZNF720Q7Z2F6 126 aa13.33□□□□□ -0.28
SSR1-205ENST00000475213 FBXL6Q8N531 539 aa13.33□□□□□ -0.28
SSR1-205ENST00000475213 SLC7A14Q8TBB6 771 aa13.33□□□□□ -0.28
SSR1-205ENST00000475213 FOXD4L4Q8WXT5 416 aaPredicted RBP13.33□□□□□ -0.28
SSR1-205ENST00000475213 SUSD3Q96L08 255 aa13.33□□□□□ -0.28
SSR1-205ENST00000475213 KCNH6Q9H252 994 aa13.33□□□□□ -0.28
SSR1-205ENST00000475213 RPF1Q9H9Y2 349 aaKnown RBP13.33□□□□□ -0.28
SSR1-205ENST00000475213 KCNK12Q9HB15 430 aa13.33□□□□□ -0.28
SSR1-205ENST00000475213 TFIP11Q9UBB9 837 aaKnown RBP13.33□□□□□ -0.28
SSR1-205ENST00000475213 CPSF3Q9UKF6 684 aaKnown RBP13.33□□□□□ -0.28
SSR1-205ENST00000475213 UBQLN1Q9UMX0 589 aaKnown RBP13.33□□□□□ -0.28
SSR1-205ENST00000475213 SCN1AP35498 2009 aa13.32□□□□□ -0.28
SSR1-205ENST00000475213 TISP43B9A030 160 aa13.32□□□□□ -0.28
SSR1-205ENST00000475213 PPP6R2O75170 966 aa13.32□□□□□ -0.28
SSR1-205ENST00000475213 PPP1R37O75864 691 aa13.32□□□□□ -0.28
SSR1-205ENST00000475213 PDGFBP01127 241 aaPredicted RBP13.32□□□□□ -0.28
SSR1-205ENST00000475213 CYP3A5P20815 502 aa13.32□□□□□ -0.28
SSR1-205ENST00000475213 ROR1Q01973 937 aa13.32□□□□□ -0.28
SSR1-205ENST00000475213 TDGQ13569 410 aa13.32□□□□□ -0.28
SSR1-205ENST00000475213 MRPL58Q14197 206 aaKnown RBP13.32□□□□□ -0.28
SSR1-205ENST00000475213 SLC8B1Q6J4K2 584 aa13.32□□□□□ -0.28
SSR1-205ENST00000475213 GET4Q7L5D6 327 aaPredicted RBP13.32□□□□□ -0.28
SSR1-205ENST00000475213 GRASPQ7Z6J2 395 aaPredicted RBP13.32□□□□□ -0.28
SSR1-205ENST00000475213 SUGP1Q8IWZ8 645 aaKnown RBP13.32□□□□□ -0.28
SSR1-205ENST00000475213 PDILTQ8N807 584 aa13.32□□□□□ -0.28
SSR1-205ENST00000475213 HVCN1Q96D96 273 aa13.32□□□□□ -0.28
SSR1-205ENST00000475213 ZNF396Q96N95 335 aaPredicted RBP13.32□□□□□ -0.28
SSR1-205ENST00000475213 STRA6Q9BX79 667 aa13.32□□□□□ -0.28
SSR1-205ENST00000475213 IKZF4Q9H2S9 585 aa13.32□□□□□ -0.28
SSR1-205ENST00000475213 MRPL44Q9H9J2 332 aaKnown RBP13.32□□□□□ -0.28
SSR1-205ENST00000475213 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.32□□□□□ -0.284e-12■■■■□ 23
SSR1-205ENST00000475213 TBC1D7Q9P0N9 293 aa13.32□□□□□ -0.28
SSR1-205ENST00000475213 IGSF9Q9P2J2 1179 aa13.32□□□□□ -0.28
SSR1-205ENST00000475213 EPS15L1Q9UBC2 864 aa13.32□□□□□ -0.28
SSR1-205ENST00000475213 SEL1LQ9UBV2 794 aa13.32□□□□□ -0.28
SSR1-205ENST00000475213 STYXL1Q9Y6J8 313 aa13.32□□□□□ -0.28
SSR1-205ENST00000475213 TCHHQ07283 1943 aa13.31□□□□□ -0.28
SSR1-205ENST00000475213 FRMD3A2A2Y4 597 aa13.31□□□□□ -0.28
SSR1-205ENST00000475213 WDR27A2RRH5 827 aa13.31□□□□□ -0.28
SSR1-205ENST00000475213 H7C4K7 107 aa13.31□□□□□ -0.28
SSR1-205ENST00000475213 XPOTO43592 962 aaKnown RBP13.31□□□□□ -0.28
SSR1-205ENST00000475213 XYLBO75191 536 aa13.31□□□□□ -0.28
SSR1-205ENST00000475213 ABLIM3O94929 683 aa13.31□□□□□ -0.28
SSR1-205ENST00000475213 HSP90AA1P07900 732 aaKnown RBP13.31□□□□□ -0.28
SSR1-205ENST00000475213 POU2F2P09086 479 aa13.31□□□□□ -0.28
SSR1-205ENST00000475213 GAP43P17677 238 aa13.31□□□□□ -0.28
SSR1-205ENST00000475213 FSHRP23945 695 aa13.31□□□□□ -0.28
SSR1-205ENST00000475213 ACOT2P49753 483 aa13.31□□□□□ -0.28
SSR1-205ENST00000475213 GUCY2FP51841 1108 aa13.31□□□□□ -0.28
SSR1-205ENST00000475213 VCPP55072 806 aaKnown RBP13.31□□□□□ -0.28
SSR1-205ENST00000475213 NTHL1P78549 312 aa13.31□□□□□ -0.28
SSR1-205ENST00000475213 KCNA1Q09470 495 aa13.31□□□□□ -0.28
SSR1-205ENST00000475213 ADALQ6DHV7 355 aa13.31□□□□□ -0.28
SSR1-205ENST00000475213 JADE1Q6IE81 842 aa13.31□□□□□ -0.28
SSR1-205ENST00000475213 SLFN12LQ6IEE8 588 aa13.31□□□□□ -0.28
SSR1-205ENST00000475213 RTL10Q7L3V2 364 aa13.31□□□□□ -0.28
SSR1-205ENST00000475213 APPL2Q8NEU8 664 aa13.31□□□□□ -0.28
SSR1-205ENST00000475213 ZNF461Q8TAF7 563 aa13.31□□□□□ -0.28
SSR1-205ENST00000475213 RSAD2Q8WXG1 361 aa13.31□□□□□ -0.28
SSR1-205ENST00000475213 TSPAN18Q96SJ8 248 aa13.31□□□□□ -0.28
SSR1-205ENST00000475213 FBXL5Q9UKA1 691 aa13.31□□□□□ -0.28
SSR1-205ENST00000475213 POLIQ9UNA4 740 aa13.31□□□□□ -0.28
SSR1-205ENST00000475213 DUSP12Q9UNI6 340 aa13.31□□□□□ -0.28
SSR1-205ENST00000475213 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.31□□□□□ -0.28
SSR1-205ENST00000475213 M0QZQ0 153 aa13.3□□□□□ -0.28
SSR1-205ENST00000475213 YEATS4O95619 227 aa13.3□□□□□ -0.28
SSR1-205ENST00000475213 F13A1P00488 732 aa13.3□□□□□ -0.28
SSR1-205ENST00000475213 ZSCAN22P10073 491 aaPredicted RBP13.3□□□□□ -0.28
SSR1-205ENST00000475213 LAMP2P13473 410 aa13.3□□□□□ -0.28
SSR1-205ENST00000475213 PDIA4P13667 645 aaKnown RBP13.3□□□□□ -0.28
SSR1-205ENST00000475213 IDEP14735 1019 aa13.3□□□□□ -0.28
SSR1-205ENST00000475213 ADSSP30520 456 aa13.3□□□□□ -0.28
SSR1-205ENST00000475213 AARSP49588 968 aaKnown RBP eCLIP13.3□□□□□ -0.28
SSR1-205ENST00000475213 ARPP19P56211 112 aa13.3□□□□□ -0.28
SSR1-205ENST00000475213 FOXD4L6Q3SYB3 417 aaPredicted RBP13.3□□□□□ -0.28
SSR1-205ENST00000475213 CTXN3Q4LDR2 81 aa13.3□□□□□ -0.28
SSR1-205ENST00000475213 L1TD1Q5T7N2 865 aaKnown RBP13.3□□□□□ -0.28
SSR1-205ENST00000475213 SPATA1Q5VX52 437 aa13.3□□□□□ -0.28
SSR1-205ENST00000475213 ZNF280DQ6N043 979 aa13.3□□□□□ -0.28
SSR1-205ENST00000475213 TMEM92Q6UXU6 159 aa13.3□□□□□ -0.28
SSR1-205ENST00000475213 FOXD4L3Q6VB84 417 aaPredicted RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms